DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group4.GMP.neu_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.37492713
Normalized Enrichment Score (NES)-1.3301784
Nominal p-value0.19726562
FDR q-value0.77709323
FWER p-Value0.743
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Maob2680.7710.0064No
2Ldhb9440.536-0.0138No
3Gpi111870.506-0.0130No
4Atp6v1c115650.444-0.0206No
5Atp1b119890.406-0.0314No
6Ndufa620660.398-0.0250No
7Acadvl23310.377-0.0286No
8Mrps2224100.370-0.0230No
9Dld24780.363-0.0170No
10Pdha125580.357-0.0117No
11Fdx131220.318-0.0319No
12Acadsb33700.298-0.0367No
13Aldh6a133760.298-0.0293No
14Sucla236460.281-0.0356No
15Hspa938050.271-0.0365No
16Dlst46160.230-0.0714No
17Atp6v1f51020.208-0.0905No
18Lrpprc52120.202-0.0908No
19Ndufs852950.197-0.0898No
20Por53510.194-0.0876No
21Atp6v0c53980.191-0.0850No
22Atp6v1g155520.184-0.0880No
23Pdhb57250.174-0.0921No
24Idh3a58700.167-0.0951No
25Oat59700.162-0.0959No
26Hadha60240.158-0.0945No
27Mtrr66430.137-0.1221No
28Acadm69340.124-0.1335No
29Surf169380.124-0.1305No
30Tomm70a70850.117-0.1348No
31Atp6v1h72070.112-0.1380No
32Afg3l272990.108-0.1398No
33Slc25a1177170.090-0.1585No
34Atp6ap177640.088-0.1586No
35Opa178390.084-0.1602No
36Atp6v0e79130.081-0.1617No
37Atp6v1d85950.052-0.1947No
38Mrpl3486330.050-0.1953No
39Mpc189950.038-0.2125No
40Pmpca91290.032-0.2184No
41Mdh292100.029-0.2216No
42Bax92740.026-0.2241No
43Mtrf193120.025-0.2253No
44Sdha93600.024-0.2271No
45Ndufc194500.021-0.2310No
46Cox1595130.019-0.2337No
47Glud195610.017-0.2356No
48Cox4i195750.016-0.2359No
49Ndufs296770.012-0.2406No
50Idh197830.008-0.2457No
51Vdac198580.005-0.2493No
52Nnt10173-0.001-0.2651No
53Ech110185-0.001-0.2656No
54Tcirg110208-0.002-0.2667No
55Idh210311-0.006-0.2717No
56Alas110337-0.007-0.2728No
57Ogdh10549-0.015-0.2830No
58Slc25a1210590-0.016-0.2846No
59Cyc110637-0.018-0.2865No
60Got210668-0.020-0.2875No
61Cox7b10821-0.025-0.2945No
62Ndufb310836-0.025-0.2945No
63Atp6v1e110937-0.029-0.2988No
64Mfn211033-0.033-0.3028No
65Ndufv211130-0.038-0.3066No
66Timm17a11286-0.044-0.3133No
67Uqcr1111488-0.052-0.3221No
68Etfb11515-0.053-0.3220No
69Timm8b11609-0.057-0.3253No
70Cyb5a11683-0.059-0.3274No
71Cox7a2l11712-0.060-0.3273No
72Ndufa411794-0.064-0.3297No
73Phyh11825-0.066-0.3295No
74Mrps1211873-0.067-0.3302No
75Polr2f11992-0.072-0.3343No
76Cox1011996-0.072-0.3326No
77Ndufa912001-0.072-0.3309No
78Tomm2212007-0.072-0.3293No
79Mrpl1112066-0.075-0.3303No
80Mtx212118-0.077-0.3309No
81Sdhd12335-0.085-0.3396No
82Supv3l112348-0.085-0.3380No
83Mrps1112433-0.090-0.3399No
84Sdhb12470-0.092-0.3393No
85Ndufa212499-0.093-0.3383No
86Cox7a212540-0.094-0.3379No
87Cs12726-0.103-0.3446No
88Timm1312923-0.110-0.3517No
89Aco213157-0.117-0.3604No
90Bdh213239-0.120-0.3614No
91Immt13364-0.125-0.3644No
92Timm1013431-0.127-0.3645No
93Decr113524-0.131-0.3657No
94Ndufs113658-0.136-0.3689No
95Ndufab113739-0.140-0.3694No
96Mrpl1513775-0.142-0.3675No
97Pdhx13924-0.148-0.3711Yes
98Cox7c13925-0.148-0.3673Yes
99Slc25a513993-0.151-0.3668Yes
100Timm914032-0.153-0.3647Yes
101Oxa1l14074-0.155-0.3628Yes
102Ndufs614140-0.158-0.3620Yes
103Ndufa514142-0.158-0.3580Yes
104Vdac314309-0.164-0.3621Yes
105Uqcrh14336-0.166-0.3592Yes
106Idh3g14369-0.167-0.3565Yes
107Cox6c14406-0.170-0.3539Yes
108Mgst314412-0.170-0.3498Yes
109Mrps1514440-0.171-0.3467Yes
110Fh114447-0.172-0.3426Yes
111Dlat14560-0.176-0.3437Yes
112Gpx414625-0.180-0.3423Yes
113Cox8a14683-0.183-0.3405Yes
114Iscu14762-0.186-0.3396Yes
115Acat114794-0.188-0.3363Yes
116Ndufv114829-0.190-0.3331Yes
117Vdac214895-0.194-0.3314Yes
118Timm5015002-0.199-0.3316Yes
119Retsat15007-0.199-0.3267Yes
120Hccs15201-0.208-0.3310Yes
121Ndufa815532-0.220-0.3420Yes
122Ndufa115722-0.228-0.3457Yes
123Rhot115759-0.230-0.3416Yes
124Casp715791-0.231-0.3372Yes
125Cox1115845-0.234-0.3338Yes
126Abcb715850-0.235-0.3279Yes
127Ndufb515887-0.237-0.3237Yes
128Uqcrc116027-0.245-0.3244Yes
129Etfa16067-0.248-0.3199Yes
130Mdh116083-0.249-0.3142Yes
131Uqcrc216159-0.255-0.3115Yes
132Ndufb616235-0.259-0.3086Yes
133Uqcrfs116296-0.262-0.3048Yes
134Ndufb716658-0.280-0.3158Yes
135Uqcrq16680-0.282-0.3096Yes
136Fxn16741-0.285-0.3053Yes
137Acaa216959-0.298-0.3085Yes
138Aifm117068-0.304-0.3061Yes
139Cox1717180-0.311-0.3037Yes
140Mrps3017314-0.317-0.3022Yes
141Eci117358-0.320-0.2961Yes
142Echs117405-0.323-0.2901Yes
143Mrpl3517554-0.332-0.2890Yes
144Acaa1a17560-0.332-0.2807Yes
145Ndufs417563-0.332-0.2723Yes
146Grpel117585-0.334-0.2647Yes
147Cox6a117718-0.344-0.2625Yes
148Uqcrb17833-0.354-0.2591Yes
149Suclg117897-0.359-0.2530Yes
150Ndufs717908-0.360-0.2442Yes
151Hsd17b1017931-0.362-0.2360Yes
152Bckdha17978-0.366-0.2289Yes
153Nqo218011-0.368-0.2211Yes
154Ldha18048-0.371-0.2133Yes
155Ndufs318063-0.372-0.2044Yes
156Hadhb18132-0.378-0.1981Yes
157Slc25a318194-0.385-0.1913Yes
158Pdp118330-0.397-0.1878Yes
159Idh3b18381-0.401-0.1800Yes
160Atp6v0b18386-0.402-0.1699Yes
161Phb218508-0.409-0.1654Yes
162Cox6b118509-0.409-0.1549Yes
163Sdhc18692-0.428-0.1530Yes
164Uqcr1018698-0.429-0.1422Yes
165Rhot218764-0.437-0.1342Yes
166Cpt1a18843-0.451-0.1265Yes
167Htra218875-0.455-0.1163Yes
168Ndufa718902-0.459-0.1058Yes
169Ndufa318905-0.459-0.0941Yes
170Ndufc218925-0.462-0.0831Yes
171Ndufb218988-0.469-0.0742Yes
172Prdx319229-0.512-0.0731Yes
173Cox5a19296-0.525-0.0629Yes
174Ndufb819299-0.525-0.0494Yes
175Etfdh19347-0.535-0.0380Yes
176Slc25a2019377-0.540-0.0255Yes
177Slc25a419390-0.543-0.0122Yes
178Atp5pb19413-0.5490.0009Yes
179Cox5b19530-0.5800.0100Yes
180Cyb5r319536-0.5810.0247Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION