Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group4.GMP.neu_Pheno.cls #Group1_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	0
GeneSet	HALLMARK_MYOGENESIS
Enrichment Score (ES)	0.27869132
Normalized Enrichment Score (NES)	1.1645145
Nominal p-value	0.16699411
FDR q-value	0.9245678
FWER p-Value	0.929

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gsn	267	0.771	0.0073	Yes
2	Sptan1	288	0.753	0.0265	Yes
3	Itgb5	484	0.659	0.0344	Yes
4	Reep1	543	0.636	0.0485	Yes
5	Myh9	574	0.625	0.0638	Yes
6	Cnn3	579	0.621	0.0803	Yes
7	Sh3bgr	592	0.619	0.0963	Yes
8	Cd36	688	0.590	0.1074	Yes
9	Pick1	774	0.576	0.1186	Yes
10	Eif4a2	816	0.568	0.1318	Yes
11	Gpx3	835	0.562	0.1460	Yes
12	Chrnb1	838	0.561	0.1609	Yes
13	Kcnh1	1146	0.507	0.1591	Yes
14	Stc2	1341	0.475	0.1621	Yes
15	Ptp4a3	1467	0.456	0.1681	Yes
16	Flii	1491	0.453	0.1791	Yes
17	Gja5	1536	0.448	0.1889	Yes
18	Kcnh2	1974	0.407	0.1778	Yes
19	Bhlhe40	2042	0.400	0.1852	Yes
20	Fdps	2170	0.391	0.1893	Yes
21	Gnao1	2231	0.386	0.1966	Yes
22	Nqo1	2289	0.381	0.2040	Yes
23	Cdh13	2333	0.377	0.2120	Yes
24	Itgb4	2363	0.373	0.2205	Yes
25	Nos1	2427	0.369	0.2273	Yes
26	Fhl1	2575	0.356	0.2294	Yes
27	Smtn	2722	0.344	0.2313	Yes
28	Tnni2	2970	0.329	0.2277	Yes
29	Ncam1	3030	0.325	0.2335	Yes
30	Nav2	3077	0.322	0.2398	Yes
31	Gabarapl2	3149	0.316	0.2447	Yes
32	Ocel1	3433	0.293	0.2384	Yes
33	Dtna	3462	0.291	0.2448	Yes
34	Foxo4	3463	0.291	0.2526	Yes
35	Myoz1	3626	0.281	0.2520	Yes
36	Mapre3	3760	0.274	0.2527	Yes
37	Akt2	3780	0.272	0.2590	Yes
38	Myom1	3803	0.271	0.2652	Yes
39	Bin1	3808	0.271	0.2723	Yes
40	Slc6a8	3860	0.268	0.2769	Yes
41	Agl	3967	0.264	0.2787	Yes
42	Eno3	4355	0.240	0.2657	No
43	Myl6b	4594	0.232	0.2599	No
44	Mybpc3	4801	0.222	0.2555	No
45	Actn3	4822	0.221	0.2605	No
46	Myom2	4830	0.221	0.2661	No
47	Myh8	4842	0.221	0.2714	No
48	Hdac5	4957	0.218	0.2715	No
49	Acsl1	5193	0.203	0.2652	No
50	Itgb1	5308	0.197	0.2647	No
51	Tsc2	5336	0.195	0.2686	No
52	Klf5	5423	0.190	0.2694	No
53	Camk2b	5585	0.182	0.2662	No
54	Ppfia4	5649	0.178	0.2678	No
55	Myh11	5652	0.178	0.2725	No
56	Actn2	5786	0.171	0.2704	No
57	Sh2b1	5884	0.166	0.2700	No
58	Tagln	6092	0.155	0.2637	No
59	Gadd45b	6726	0.133	0.2354	No
60	Tnnt1	7608	0.095	0.1937	No
61	Tpd52l1	7618	0.095	0.1958	No
62	Aplnr	7622	0.095	0.1982	No
63	Atp6ap1	7764	0.088	0.1934	No
64	Svil	7902	0.081	0.1887	No
65	Tpm3	8150	0.072	0.1782	No
66	Ifrd1	8307	0.065	0.1721	No
67	Ctf1	8474	0.058	0.1653	No
68	Pygm	8657	0.050	0.1575	No
69	Pde4dip	9042	0.036	0.1392	No
70	App	9156	0.032	0.1344	No
71	Notch1	9781	0.008	0.1032	No
72	Col1a1	9999	0.000	0.0923	No
73	Sparc	10004	0.000	0.0921	No
74	Ckmt2	10010	0.000	0.0918	No
75	Bag1	10312	-0.006	0.0769	No
76	Adcy9	10335	-0.007	0.0759	No
77	Pfkm	10415	-0.010	0.0722	No
78	Dmd	10758	-0.022	0.0556	No
79	Tpm2	10837	-0.025	0.0524	No
80	Pkia	10856	-0.026	0.0522	No
81	Sphk1	10991	-0.032	0.0463	No
82	Col15a1	11020	-0.033	0.0458	No
83	Gaa	11384	-0.048	0.0288	No
84	Prnp	11453	-0.050	0.0267	No
85	Kifc3	11504	-0.052	0.0256	No
86	Fkbp1b	11643	-0.058	0.0202	No
87	Lpin1	11792	-0.064	0.0145	No
88	Igf1	11833	-0.066	0.0143	No
89	Hbegf	11840	-0.066	0.0157	No
90	Tnnt3	11887	-0.068	0.0152	No
91	Cox7a1	12100	-0.076	0.0066	No
92	Tnnc1	12308	-0.084	-0.0015	No
93	Myl4	12448	-0.091	-0.0061	No
94	Crat	12595	-0.096	-0.0108	No
95	Rb1	12775	-0.104	-0.0170	No
96	Col4a2	12935	-0.110	-0.0221	No
97	Pgam2	13041	-0.114	-0.0243	No
98	Mylk	13489	-0.129	-0.0433	No
99	Pcx	13584	-0.133	-0.0444	No
100	Large1	13621	-0.134	-0.0427	No
101	Lama2	13852	-0.145	-0.0503	No
102	Fgf2	13976	-0.151	-0.0525	No
103	Mef2c	14229	-0.161	-0.0608	No
104	Ankrd2	14561	-0.177	-0.0727	No
105	Atp2a1	14701	-0.183	-0.0748	No
106	Syngr2	15016	-0.199	-0.0852	No
107	Schip1	15085	-0.203	-0.0832	No
108	Sorbs1	15109	-0.204	-0.0789	No
109	Cacna1h	15271	-0.211	-0.0813	No
110	Pdlim7	15468	-0.218	-0.0853	No
111	Erbb3	15670	-0.225	-0.0893	No
112	Dapk2	15730	-0.228	-0.0862	No
113	Mef2a	15900	-0.237	-0.0883	No
114	Mef2d	15937	-0.240	-0.0837	No
115	Psen2	16004	-0.244	-0.0804	No
116	Sirt2	16194	-0.257	-0.0831	No
117	Igfbp7	16386	-0.267	-0.0855	No
118	Myo1c	16526	-0.274	-0.0851	No
119	Clu	16831	-0.290	-0.0926	No
120	Fst	16855	-0.292	-0.0859	No
121	Csrp3	16878	-0.293	-0.0792	No
122	Cryab	17030	-0.302	-0.0786	No
123	Agrn	17042	-0.303	-0.0711	No
124	Dmpk	17148	-0.309	-0.0681	No
125	Rit1	17224	-0.313	-0.0634	No
126	Mylpf	17831	-0.354	-0.0844	No
127	Tgfb1	17835	-0.355	-0.0750	No
128	Lsp1	18359	-0.399	-0.0906	No
129	Mras	18455	-0.406	-0.0845	No
130	Wwtr1	18490	-0.408	-0.0752	No
131	Plxnb2	18897	-0.458	-0.0833	No
132	Ablim1	19019	-0.474	-0.0767	No
133	Ache	19087	-0.483	-0.0671	No
134	Ak1	19199	-0.504	-0.0591	No
135	Adam12	19203	-0.505	-0.0457	No
136	Sgcd	19445	-0.560	-0.0428	No
137	Cfd	19517	-0.575	-0.0309	No
138	Cdkn1a	19559	-0.586	-0.0173	No
139	Sorbs3	19808	-0.676	-0.0116	No
140	Ryr1	19941	-0.837	0.0043	No