| Dataset | GMP.GMP.neu_Pheno.cls #Group1_versus_Group4.GMP.neu_Pheno.cls #Group1_versus_Group4_repos |
| Phenotype | GMP.neu_Pheno.cls#Group1_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_KRAS_SIGNALING_UP |
| Enrichment Score (ES) | -0.23830426 |
| Normalized Enrichment Score (NES) | -1.0717031 |
| Nominal p-value | 0.3265306 |
| FDR q-value | 0.7128875 |
| FWER p-Value | 0.98 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Tmem158 | 63 | 1.007 | 0.0215 | No |
| 2 | Scg3 | 124 | 0.875 | 0.0400 | No |
| 3 | Tnfaip3 | 134 | 0.861 | 0.0607 | No |
| 4 | Sema3b | 181 | 0.818 | 0.0785 | No |
| 5 | Klf4 | 201 | 0.806 | 0.0973 | No |
| 6 | Ets1 | 266 | 0.771 | 0.1130 | No |
| 7 | Kif5c | 351 | 0.715 | 0.1264 | No |
| 8 | Il1rl2 | 901 | 0.545 | 0.1121 | No |
| 9 | Scg5 | 911 | 0.543 | 0.1250 | No |
| 10 | Cmklr1 | 1358 | 0.472 | 0.1142 | No |
| 11 | Flt4 | 1463 | 0.456 | 0.1201 | No |
| 12 | F13a1 | 1532 | 0.449 | 0.1277 | No |
| 13 | Tnfrsf1b | 1597 | 0.439 | 0.1353 | No |
| 14 | Tlr8 | 1975 | 0.407 | 0.1263 | No |
| 15 | Ptprr | 2017 | 0.403 | 0.1341 | No |
| 16 | Il7r | 2307 | 0.380 | 0.1289 | No |
| 17 | Cbx8 | 2556 | 0.358 | 0.1252 | No |
| 18 | Mafb | 2794 | 0.338 | 0.1216 | No |
| 19 | H2bc3 | 3060 | 0.323 | 0.1162 | No |
| 20 | Rbm4 | 3075 | 0.322 | 0.1234 | No |
| 21 | Usp12 | 3082 | 0.321 | 0.1310 | No |
| 22 | Cxcl10 | 3290 | 0.303 | 0.1280 | No |
| 23 | Rgs16 | 3354 | 0.298 | 0.1322 | No |
| 24 | Ptcd2 | 3411 | 0.295 | 0.1366 | No |
| 25 | Ero1a | 3511 | 0.287 | 0.1387 | No |
| 26 | Akt2 | 3780 | 0.272 | 0.1319 | No |
| 27 | Nin | 3792 | 0.272 | 0.1380 | No |
| 28 | Cbl | 3855 | 0.268 | 0.1415 | No |
| 29 | Ppp1r15a | 3971 | 0.264 | 0.1422 | No |
| 30 | Dcbld2 | 4183 | 0.252 | 0.1377 | No |
| 31 | Scn1b | 4278 | 0.246 | 0.1390 | No |
| 32 | Plaur | 4329 | 0.242 | 0.1425 | No |
| 33 | Id2 | 4581 | 0.233 | 0.1355 | No |
| 34 | Dusp6 | 4636 | 0.229 | 0.1384 | No |
| 35 | Dnmbp | 4683 | 0.226 | 0.1417 | No |
| 36 | F2rl1 | 4728 | 0.224 | 0.1449 | No |
| 37 | Traf1 | 4825 | 0.221 | 0.1455 | No |
| 38 | Clec4a3 | 4833 | 0.221 | 0.1506 | No |
| 39 | Ammecr1 | 5034 | 0.212 | 0.1458 | No |
| 40 | Ly96 | 5284 | 0.198 | 0.1381 | No |
| 41 | Glrx | 5313 | 0.197 | 0.1415 | No |
| 42 | Yrdc | 5408 | 0.191 | 0.1415 | No |
| 43 | Hdac9 | 5987 | 0.161 | 0.1163 | No |
| 44 | Reln | 6365 | 0.148 | 0.1010 | No |
| 45 | Map3k1 | 6516 | 0.143 | 0.0970 | No |
| 46 | Strn | 6828 | 0.127 | 0.0844 | No |
| 47 | Itgb2 | 6978 | 0.122 | 0.0799 | No |
| 48 | Inhba | 7142 | 0.114 | 0.0746 | No |
| 49 | Mmp11 | 7189 | 0.113 | 0.0750 | No |
| 50 | Gng11 | 7365 | 0.105 | 0.0688 | No |
| 51 | Cfb | 7486 | 0.100 | 0.0652 | No |
| 52 | Avl9 | 7488 | 0.100 | 0.0676 | No |
| 53 | Birc3 | 7497 | 0.100 | 0.0697 | No |
| 54 | G0s2 | 7600 | 0.096 | 0.0669 | No |
| 55 | Dock2 | 7696 | 0.091 | 0.0643 | No |
| 56 | Fuca1 | 7955 | 0.080 | 0.0533 | No |
| 57 | Nrp1 | 7969 | 0.079 | 0.0546 | No |
| 58 | Plau | 8058 | 0.076 | 0.0520 | No |
| 59 | Sdccag8 | 8675 | 0.049 | 0.0222 | No |
| 60 | Etv1 | 8710 | 0.048 | 0.0217 | No |
| 61 | Etv4 | 8711 | 0.048 | 0.0229 | No |
| 62 | Ccnd2 | 8888 | 0.043 | 0.0151 | No |
| 63 | Zfp639 | 8991 | 0.038 | 0.0109 | No |
| 64 | Gucy1a1 | 9092 | 0.034 | 0.0067 | No |
| 65 | Adam17 | 9135 | 0.032 | 0.0053 | No |
| 66 | Crot | 9251 | 0.028 | 0.0002 | No |
| 67 | Btc | 9380 | 0.023 | -0.0056 | No |
| 68 | Ccser2 | 9833 | 0.006 | -0.0282 | No |
| 69 | Atg10 | 9838 | 0.006 | -0.0283 | No |
| 70 | Ppbp | 10024 | 0.000 | -0.0376 | No |
| 71 | Evi5 | 10769 | -0.023 | -0.0745 | No |
| 72 | Trib1 | 10888 | -0.027 | -0.0797 | No |
| 73 | Hsd11b1 | 10994 | -0.032 | -0.0842 | No |
| 74 | Satb1 | 11005 | -0.032 | -0.0840 | No |
| 75 | Gprc5b | 11060 | -0.035 | -0.0858 | No |
| 76 | Akap12 | 11123 | -0.037 | -0.0880 | No |
| 77 | St6gal1 | 11134 | -0.038 | -0.0876 | No |
| 78 | Itga2 | 11298 | -0.044 | -0.0947 | No |
| 79 | Epb41l3 | 11512 | -0.053 | -0.1041 | No |
| 80 | Cdadc1 | 11590 | -0.056 | -0.1066 | No |
| 81 | Nr1h4 | 11647 | -0.058 | -0.1080 | No |
| 82 | Hbegf | 11840 | -0.066 | -0.1161 | No |
| 83 | Angptl4 | 12079 | -0.075 | -0.1262 | No |
| 84 | Mtmr10 | 12264 | -0.082 | -0.1334 | No |
| 85 | Wdr33 | 12305 | -0.084 | -0.1334 | No |
| 86 | Itgbl1 | 12446 | -0.091 | -0.1382 | No |
| 87 | Rabgap1l | 12459 | -0.091 | -0.1366 | No |
| 88 | Spon1 | 12800 | -0.105 | -0.1511 | No |
| 89 | Hkdc1 | 12810 | -0.105 | -0.1490 | No |
| 90 | Lcp1 | 12851 | -0.106 | -0.1484 | No |
| 91 | Map7 | 12891 | -0.108 | -0.1477 | No |
| 92 | Bpgm | 12990 | -0.112 | -0.1498 | No |
| 93 | Lat2 | 13024 | -0.113 | -0.1487 | No |
| 94 | Mycn | 13289 | -0.122 | -0.1590 | No |
| 95 | Pdcd1lg2 | 13353 | -0.124 | -0.1591 | No |
| 96 | Mmd | 13525 | -0.131 | -0.1645 | No |
| 97 | Spry2 | 13534 | -0.131 | -0.1617 | No |
| 98 | Gadd45g | 13559 | -0.132 | -0.1597 | No |
| 99 | Wnt7a | 13876 | -0.146 | -0.1720 | No |
| 100 | Tor1aip2 | 13897 | -0.147 | -0.1694 | No |
| 101 | Irf8 | 13950 | -0.149 | -0.1683 | No |
| 102 | Slpi | 13998 | -0.151 | -0.1670 | No |
| 103 | Gfpt2 | 14368 | -0.167 | -0.1814 | No |
| 104 | Ikzf1 | 14381 | -0.168 | -0.1779 | No |
| 105 | Cd37 | 14459 | -0.172 | -0.1776 | No |
| 106 | Tspan7 | 15113 | -0.204 | -0.2054 | No |
| 107 | Cfh | 15274 | -0.211 | -0.2083 | No |
| 108 | Ptgs2 | 15375 | -0.213 | -0.2081 | No |
| 109 | Ptbp2 | 15580 | -0.222 | -0.2129 | No |
| 110 | Adgrl4 | 15642 | -0.224 | -0.2104 | No |
| 111 | Ank | 15876 | -0.236 | -0.2164 | No |
| 112 | Cab39l | 16313 | -0.264 | -0.2318 | Yes |
| 113 | Laptm5 | 16358 | -0.266 | -0.2275 | Yes |
| 114 | Gypc | 16368 | -0.266 | -0.2214 | Yes |
| 115 | Adam8 | 16539 | -0.274 | -0.2233 | Yes |
| 116 | Ctss | 16561 | -0.275 | -0.2176 | Yes |
| 117 | Tfpi | 16585 | -0.277 | -0.2119 | Yes |
| 118 | Cpe | 16613 | -0.279 | -0.2064 | Yes |
| 119 | Map4k1 | 17055 | -0.303 | -0.2212 | Yes |
| 120 | Vwa5a | 17135 | -0.308 | -0.2176 | Yes |
| 121 | Zfp277 | 17174 | -0.311 | -0.2119 | Yes |
| 122 | Gpnmb | 17190 | -0.312 | -0.2050 | Yes |
| 123 | Spp1 | 17283 | -0.316 | -0.2018 | Yes |
| 124 | Kcnn4 | 17544 | -0.331 | -0.2068 | Yes |
| 125 | Eng | 17551 | -0.332 | -0.1990 | Yes |
| 126 | Abcb1a | 17622 | -0.337 | -0.1942 | Yes |
| 127 | Pecam1 | 17650 | -0.339 | -0.1872 | Yes |
| 128 | Il10ra | 17850 | -0.356 | -0.1885 | Yes |
| 129 | Prdm1 | 17938 | -0.362 | -0.1840 | Yes |
| 130 | Psmb8 | 18044 | -0.370 | -0.1802 | Yes |
| 131 | Fcer1g | 18045 | -0.371 | -0.1711 | Yes |
| 132 | Ano1 | 18099 | -0.376 | -0.1645 | Yes |
| 133 | Galnt3 | 18173 | -0.383 | -0.1588 | Yes |
| 134 | Etv5 | 18186 | -0.384 | -0.1500 | Yes |
| 135 | Tspan13 | 18189 | -0.384 | -0.1406 | Yes |
| 136 | Cxcr4 | 18324 | -0.396 | -0.1376 | Yes |
| 137 | Adgra2 | 18444 | -0.405 | -0.1337 | Yes |
| 138 | Fbxo4 | 18478 | -0.408 | -0.1253 | Yes |
| 139 | Tmem176b | 18484 | -0.408 | -0.1156 | Yes |
| 140 | Arg1 | 18488 | -0.408 | -0.1057 | Yes |
| 141 | Aldh1a3 | 18597 | -0.419 | -0.1008 | Yes |
| 142 | Nr0b2 | 18655 | -0.423 | -0.0933 | Yes |
| 143 | Trib2 | 18691 | -0.428 | -0.0846 | Yes |
| 144 | Jup | 18727 | -0.433 | -0.0757 | Yes |
| 145 | Prelid3b | 18852 | -0.452 | -0.0708 | Yes |
| 146 | Btbd3 | 19121 | -0.488 | -0.0723 | Yes |
| 147 | Plek2 | 19216 | -0.508 | -0.0646 | Yes |
| 148 | Il2rg | 19358 | -0.537 | -0.0585 | Yes |
| 149 | Cbr4 | 19424 | -0.552 | -0.0482 | Yes |
| 150 | Plvap | 19552 | -0.584 | -0.0402 | Yes |
| 151 | Tmem176a | 19653 | -0.617 | -0.0301 | Yes |
| 152 | Car2 | 19749 | -0.652 | -0.0189 | Yes |
| 153 | Ephb2 | 19772 | -0.658 | -0.0038 | Yes |
| 154 | Csf2ra | 19800 | -0.673 | 0.0114 | Yes |

