DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group4.GMP.neu_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.46950626
Normalized Enrichment Score (NES)-1.5538706
Nominal p-value0.031512607
FDR q-value0.56862533
FWER p-Value0.296
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Isg15621.0110.0371No
2Cd744470.6730.0446No
3Irf19260.5380.0420No
4Ifit321250.395-0.0024No
5Txnip30940.320-0.0382No
6Cxcl1032900.303-0.0359No
7Psme240520.260-0.0638No
8Ripk241760.252-0.0599No
9Trafd152380.200-0.1052No
10Tap153420.195-0.1026No
11Ccrl254300.190-0.0995No
12Cmpk265260.142-0.1487No
13Cmtr168020.128-0.1574No
14Ube2l669020.125-0.1574No
15Batf274040.104-0.1784No
16Eif2ak274500.102-0.1766No
17Ifi3075950.096-0.1800No
18Slc25a2877140.090-0.1824No
19Isg2080370.076-0.1955No
20Ifi4483720.062-0.2097No
21Parp984020.061-0.2088No
22Ifit287650.047-0.2251No
23Ncoa791500.032-0.2431No
24Ogfr91920.030-0.2439No
25Wars195310.018-0.2602No
26Rnf3195970.015-0.2628No
27Irf997170.010-0.2684No
28Parp1497890.008-0.2716No
29Usp1810320-0.006-0.2980No
30Il710921-0.028-0.3269No
31Plscr111760-0.062-0.3665No
32Pnpt111930-0.069-0.3722No
33Bst211944-0.070-0.3701No
34Lap312071-0.075-0.3734No
35Gbp312285-0.083-0.3808No
36Gmpr12296-0.083-0.3780No
37Nub112316-0.084-0.3756No
38Lpar612359-0.086-0.3743No
39Elf112539-0.094-0.3795No
40Cnp12770-0.104-0.3869No
41Uba713179-0.118-0.4027No
42Cd4713611-0.134-0.4190No
43Adar13819-0.144-0.4237No
44Ifi3513864-0.146-0.4201No
45Trim2113904-0.147-0.4162No
46Irf214202-0.160-0.4247No
47Tmem14014231-0.161-0.4198No
48Rsad214398-0.169-0.4214No
49Il4ra14630-0.180-0.4258No
50Dhx5814642-0.180-0.4192No
51Psma314848-0.191-0.4219No
52Trim2515019-0.200-0.4224No
53Ifi2715920-0.238-0.4581No
54Mvb12a16148-0.254-0.4594Yes
55Stat216256-0.260-0.4545Yes
56Mx216369-0.266-0.4495Yes
57Sp11016548-0.275-0.4475Yes
58Tdrd716566-0.276-0.4374Yes
59Casp816575-0.277-0.4268Yes
60Ifitm216718-0.284-0.4226Yes
61Sell16906-0.295-0.4203Yes
62Helz217041-0.303-0.4150Yes
63Oas1a17119-0.307-0.4066Yes
64Psme117291-0.316-0.4026Yes
65Samd9l17374-0.321-0.3940Yes
66Irf717630-0.337-0.3934Yes
67Tent5a17713-0.344-0.3838Yes
68Psmb818044-0.370-0.3856Yes
69Casp118054-0.371-0.3713Yes
70Ifih118062-0.372-0.3569Yes
71Trim12c18310-0.395-0.3536Yes
72Epsti118357-0.399-0.3400Yes
73Ifitm118401-0.403-0.3261Yes
74Trim1418686-0.427-0.3234Yes
75Ddx6018737-0.434-0.3087Yes
76Rtp418899-0.458-0.2985Yes
77Psmb919129-0.490-0.2905Yes
78Il1519360-0.537-0.2807Yes
79Procr19391-0.543-0.2606Yes
80Oasl119620-0.603-0.2481Yes
81Nmi19627-0.606-0.2243Yes
82Mov1019660-0.620-0.2013Yes
83Trim2619665-0.621-0.1768Yes
84B2m19702-0.634-0.1534Yes
85Lgals3bp19757-0.653-0.1301Yes
86Parp1219763-0.655-0.1043Yes
87Ly6e19792-0.667-0.0792Yes
88Herc619796-0.671-0.0526Yes
89Ifitm319896-0.756-0.0276Yes
90Csf119963-0.8560.0032Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE