DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group4.GMP.neu_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.22948754
Normalized Enrichment Score (NES)0.99229413
Nominal p-value0.4609375
FDR q-value1.0
FWER p-Value0.996
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il18r1521.0390.0198Yes
2Gpr183870.9540.0387Yes
3Slc7a2950.9340.0585Yes
4F3970.9280.0784Yes
5Kif1b3890.7010.0789Yes
6Nod25100.6460.0868Yes
7Kcnj25500.6320.0985Yes
8Ldlr7470.5820.1012Yes
9Kcnmb27810.5740.1119Yes
10Tnfaip68370.5620.1212Yes
11Irf19260.5380.1284Yes
12Ros19930.5250.1364Yes
13Tlr211080.5120.1417Yes
14Npffr211780.5060.1492Yes
15Fzd511950.5050.1593Yes
16Mefv13370.4760.1624Yes
17Sema4d13460.4740.1722Yes
18Cmklr113580.4720.1819Yes
19Itga513630.4720.1918Yes
20Rnf144b14150.4650.1993Yes
21Tnfrsf1b15970.4390.1997Yes
22Il18rap19120.4140.1928Yes
23Ebi319650.4070.1990Yes
24Il7r23070.3800.1900Yes
25Cd8225290.3610.1867Yes
26Pcdh726930.3470.1859Yes
27Atp2a229360.3310.1809Yes
28Adora2b29640.3290.1867Yes
29Klf629940.3290.1923Yes
30Slc11a230170.3270.1982Yes
31Gp1ba30670.3220.2027Yes
32Btg232540.3060.2000Yes
33Cxcl1032900.3030.2047Yes
34Clec5a33020.3020.2107Yes
35Rgs1633540.2980.2146Yes
36Axl33690.2980.2203Yes
37Nfkbia34650.2910.2218Yes
38Gch135040.2880.2261Yes
39P2rx736570.2800.2245Yes
40Cxcr636830.2790.2293Yes
41Atp2b138540.2680.2265Yes
42Ripk241760.2520.2158Yes
43Dcbld241830.2520.2209Yes
44Scn1b42780.2460.2215Yes
45Hpn43150.2430.2249Yes
46Plaur43290.2420.2295Yes
47Tacr148280.2210.2092No
48Met50750.2100.2014No
49Hif1a52240.2010.1982No
50Ccrl254300.1900.1920No
51Tapbp54430.1890.1955No
52Ifnar154440.1890.1996No
53Itgb354480.1890.2035No
54Nlrp354920.1860.2053No
55Pvr54940.1860.2093No
56Slc31a257130.1750.2021No
57Il1857450.1730.2043No
58Gnai359860.1610.1957No
59Atp2c159990.1600.1985No
60Raf164800.1450.1775No
61Cd1464890.1440.1802No
62Inhba71420.1140.1499No
63Eif2ak274500.1020.1366No
64Aplnr76220.0950.1300No
65P2ry276570.0920.1303No
66Nampt76670.0920.1319No
67Pde4b77240.0890.1310No
68Abi177350.0890.1324No
69Aqp977400.0890.1341No
70Olr178080.0860.1326No
71Sgms280830.0750.1204No
72Lcp281510.0720.1186No
73Slc7a183690.0630.1090No
74Psen191110.0330.0724No
75Gna1593880.0230.0590No
76Il1r194160.0220.0581No
77Mmp1494730.0200.0557No
78Tlr396640.0120.0465No
79Cd6997670.0090.0415No
80Slc28a297740.0080.0414No
81Cd40100030.0000.0299No
82Cx3cl1100350.0000.0284No
83Csf3r10297-0.0050.0153No
84Scarf110397-0.0100.0106No
85Osm10476-0.0120.0069No
86Rhog10986-0.031-0.0180No
87Sphk110991-0.032-0.0176No
88Tacr311137-0.038-0.0240No
89Lyn11326-0.045-0.0325No
90Stab111496-0.052-0.0399No
91Gabbr111552-0.055-0.0415No
92Tlr111839-0.066-0.0545No
93Hbegf11840-0.066-0.0530No
94Bst211944-0.070-0.0567No
95Icam412284-0.083-0.0720No
96Il1012317-0.084-0.0718No
97Slc31a112413-0.089-0.0746No
98Slamf112417-0.090-0.0728No
99Ptger212497-0.093-0.0748No
100Ptgir12880-0.108-0.0917No
101Lck12912-0.109-0.0909No
102Rela13711-0.138-0.1281No
103Lpar113768-0.141-0.1279No
104Adgre113796-0.143-0.1261No
105Slc4a413848-0.145-0.1256No
106Sri13862-0.146-0.1231No
107Msr113989-0.151-0.1262No
108Irak214029-0.153-0.1249No
109Icosl14255-0.162-0.1327No
110Nfkb114256-0.162-0.1292No
111Gpc314294-0.164-0.1275No
112Il4ra14630-0.180-0.1405No
113Adrm114885-0.193-0.1491No
114Slc1a215203-0.208-0.1605No
115Pik3r515662-0.225-0.1787No
116Ptpre15820-0.233-0.1816No
117Acvr2a16010-0.244-0.1859No
118Tnfsf916049-0.247-0.1824No
119Kcna316118-0.251-0.1804No
120Il15ra16594-0.278-0.1984No
121Sell16906-0.295-0.2076No
122Myc16912-0.295-0.2015No
123Mxd117073-0.304-0.2030No
124Ahr17301-0.317-0.2076No
125Sele17410-0.324-0.2061No
126Ffar217479-0.328-0.2024No
127Ifngr217526-0.330-0.1976No
128Tnfrsf917608-0.335-0.1945No
129Irf717630-0.337-0.1882No
130Ptger417668-0.340-0.1828No
131Rasgrp117766-0.349-0.1801No
132Il10ra17850-0.356-0.1766No
133Nmur118254-0.390-0.1885No
134Ptafr18374-0.401-0.1858No
135Ifitm118401-0.403-0.1784No
136Cybb18663-0.424-0.1824No
137Acvr1b18709-0.430-0.1754No
138Rtp418899-0.458-0.1750No
139Selenos18917-0.460-0.1660No
140Best119075-0.481-0.1635No
141Tnfsf1019090-0.483-0.1538No
142Hrh119107-0.486-0.1441No
143Il1519360-0.537-0.1452No
144P2rx419497-0.571-0.1397No
145Emp319509-0.573-0.1279No
146Cdkn1a19559-0.586-0.1177No
147Rgs119569-0.588-0.1055No
148Icam119617-0.601-0.0949No
149Nmi19627-0.606-0.0822No
150Cd4819788-0.666-0.0759No
151Ly6e19792-0.667-0.0617No
152Gpr13219855-0.707-0.0496No
153Abca119894-0.754-0.0352No
154Csf119963-0.856-0.0202No
155Calcrl20006-1.0790.0010No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE