| Dataset | GMP.GMP.neu_Pheno.cls #Group1_versus_Group4.GMP.neu_Pheno.cls #Group1_versus_Group4_repos |
| Phenotype | GMP.neu_Pheno.cls#Group1_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_IL2_STAT5_SIGNALING |
| Enrichment Score (ES) | -0.20728613 |
| Normalized Enrichment Score (NES) | -0.9348041 |
| Nominal p-value | 0.6045082 |
| FDR q-value | 0.8137513 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Plpp1 | 4 | 1.433 | 0.0329 | No |
| 2 | Il18r1 | 52 | 1.039 | 0.0545 | No |
| 3 | Glipr2 | 381 | 0.704 | 0.0542 | No |
| 4 | Fgl2 | 714 | 0.588 | 0.0511 | No |
| 5 | S100a1 | 928 | 0.538 | 0.0528 | No |
| 6 | Myo1e | 946 | 0.535 | 0.0643 | No |
| 7 | Gucy1b1 | 1129 | 0.508 | 0.0668 | No |
| 8 | Sh3bgrl2 | 1474 | 0.455 | 0.0600 | No |
| 9 | Praf2 | 1487 | 0.453 | 0.0699 | No |
| 10 | Cdkn1c | 1488 | 0.453 | 0.0803 | No |
| 11 | Odc1 | 1493 | 0.453 | 0.0906 | No |
| 12 | Il1r2 | 1518 | 0.451 | 0.0998 | No |
| 13 | Tnfrsf1b | 1597 | 0.439 | 0.1060 | No |
| 14 | Rhob | 1625 | 0.437 | 0.1147 | No |
| 15 | Rragd | 1688 | 0.431 | 0.1216 | No |
| 16 | Ccr4 | 1842 | 0.419 | 0.1235 | No |
| 17 | Tlr7 | 1844 | 0.419 | 0.1331 | No |
| 18 | Bhlhe40 | 2042 | 0.400 | 0.1324 | No |
| 19 | Ttc39b | 2406 | 0.370 | 0.1227 | No |
| 20 | Hk2 | 2670 | 0.350 | 0.1175 | No |
| 21 | Nfkbiz | 2729 | 0.343 | 0.1225 | No |
| 22 | Klf6 | 2994 | 0.329 | 0.1168 | No |
| 23 | Dennd5a | 3085 | 0.321 | 0.1197 | No |
| 24 | Cxcl10 | 3290 | 0.303 | 0.1164 | No |
| 25 | Rgs16 | 3354 | 0.298 | 0.1201 | No |
| 26 | Fah | 3389 | 0.297 | 0.1253 | No |
| 27 | Uck2 | 3453 | 0.292 | 0.1288 | No |
| 28 | Umps | 3533 | 0.286 | 0.1314 | No |
| 29 | Lclat1 | 3571 | 0.284 | 0.1361 | No |
| 30 | Plec | 3811 | 0.271 | 0.1303 | No |
| 31 | Nop2 | 3847 | 0.269 | 0.1348 | No |
| 32 | Igf2r | 4030 | 0.261 | 0.1316 | No |
| 33 | Eno3 | 4355 | 0.240 | 0.1209 | No |
| 34 | Traf1 | 4825 | 0.221 | 0.1023 | No |
| 35 | Cd81 | 4888 | 0.221 | 0.1043 | No |
| 36 | Itga6 | 5155 | 0.205 | 0.0956 | No |
| 37 | Arl4a | 5382 | 0.193 | 0.0887 | No |
| 38 | Alcam | 5412 | 0.191 | 0.0916 | No |
| 39 | Spred2 | 5608 | 0.181 | 0.0860 | No |
| 40 | Huwe1 | 5755 | 0.173 | 0.0826 | No |
| 41 | Xbp1 | 5857 | 0.168 | 0.0814 | No |
| 42 | Pou2f1 | 6032 | 0.158 | 0.0763 | No |
| 43 | Swap70 | 6107 | 0.154 | 0.0761 | No |
| 44 | Galm | 6358 | 0.149 | 0.0669 | No |
| 45 | Mapkapk2 | 6506 | 0.143 | 0.0628 | No |
| 46 | Dhrs3 | 6507 | 0.143 | 0.0661 | No |
| 47 | Socs2 | 6528 | 0.142 | 0.0684 | No |
| 48 | Ncs1 | 6713 | 0.133 | 0.0622 | No |
| 49 | Gadd45b | 6726 | 0.133 | 0.0647 | No |
| 50 | Tiam1 | 6808 | 0.128 | 0.0635 | No |
| 51 | Map6 | 6894 | 0.126 | 0.0622 | No |
| 52 | Rnh1 | 6963 | 0.123 | 0.0616 | No |
| 53 | Capn3 | 6966 | 0.123 | 0.0643 | No |
| 54 | Itgae | 6979 | 0.122 | 0.0665 | No |
| 55 | Lrrc8c | 7201 | 0.112 | 0.0580 | No |
| 56 | Phtf2 | 7490 | 0.100 | 0.0458 | No |
| 57 | Pnp | 7560 | 0.098 | 0.0446 | No |
| 58 | Cdc6 | 7577 | 0.097 | 0.0460 | No |
| 59 | Ltb | 7631 | 0.094 | 0.0455 | No |
| 60 | Twsg1 | 7781 | 0.087 | 0.0400 | No |
| 61 | Maff | 7828 | 0.085 | 0.0396 | No |
| 62 | Plagl1 | 7911 | 0.081 | 0.0374 | No |
| 63 | Nrp1 | 7969 | 0.079 | 0.0363 | No |
| 64 | Hycc2 | 8133 | 0.072 | 0.0298 | No |
| 65 | Phlda1 | 8173 | 0.070 | 0.0294 | No |
| 66 | Itih5 | 8219 | 0.069 | 0.0287 | No |
| 67 | Etv4 | 8711 | 0.048 | 0.0051 | No |
| 68 | Cst7 | 8777 | 0.046 | 0.0029 | No |
| 69 | Ccnd2 | 8888 | 0.043 | -0.0017 | No |
| 70 | Hopx | 8894 | 0.042 | -0.0009 | No |
| 71 | Etfbkmt | 8946 | 0.040 | -0.0026 | No |
| 72 | Pdcd2l | 9250 | 0.028 | -0.0172 | No |
| 73 | Tnfsf11 | 9253 | 0.028 | -0.0167 | No |
| 74 | Ccne1 | 9358 | 0.024 | -0.0214 | No |
| 75 | Cdcp1 | 9362 | 0.024 | -0.0210 | No |
| 76 | Itgav | 9383 | 0.023 | -0.0215 | No |
| 77 | Cd86 | 9398 | 0.023 | -0.0216 | No |
| 78 | Cd79b | 9666 | 0.012 | -0.0348 | No |
| 79 | Bcl2l1 | 9709 | 0.011 | -0.0367 | No |
| 80 | Slc2a3 | 9932 | 0.002 | -0.0478 | No |
| 81 | Prkch | 9969 | 0.001 | -0.0496 | No |
| 82 | Ptrh2 | 10189 | -0.001 | -0.0606 | No |
| 83 | Anxa4 | 10225 | -0.003 | -0.0623 | No |
| 84 | Igf1r | 10249 | -0.004 | -0.0634 | No |
| 85 | Cyfip1 | 10299 | -0.005 | -0.0657 | No |
| 86 | Bcl2 | 10348 | -0.008 | -0.0680 | No |
| 87 | Ikzf4 | 10365 | -0.008 | -0.0686 | No |
| 88 | She | 10404 | -0.010 | -0.0703 | No |
| 89 | Snx14 | 10418 | -0.010 | -0.0707 | No |
| 90 | F2rl2 | 10684 | -0.020 | -0.0836 | No |
| 91 | Ifngr1 | 10716 | -0.021 | -0.0847 | No |
| 92 | Cdc42se2 | 10867 | -0.026 | -0.0916 | No |
| 93 | Snx9 | 10876 | -0.027 | -0.0914 | No |
| 94 | P4ha1 | 11080 | -0.036 | -0.1008 | No |
| 95 | Cd44 | 11127 | -0.038 | -0.1023 | No |
| 96 | Furin | 11196 | -0.040 | -0.1048 | No |
| 97 | Ptch1 | 11200 | -0.041 | -0.1040 | No |
| 98 | Tnfrsf21 | 11229 | -0.042 | -0.1044 | No |
| 99 | Rora | 11316 | -0.045 | -0.1077 | No |
| 100 | Prnp | 11453 | -0.050 | -0.1134 | No |
| 101 | Nfil3 | 11684 | -0.059 | -0.1236 | No |
| 102 | Plscr1 | 11760 | -0.062 | -0.1260 | No |
| 103 | Icos | 12072 | -0.075 | -0.1399 | No |
| 104 | Flt3l | 12080 | -0.076 | -0.1385 | No |
| 105 | Tgm2 | 12189 | -0.080 | -0.1421 | No |
| 106 | Spry4 | 12232 | -0.081 | -0.1423 | No |
| 107 | Gbp3 | 12285 | -0.083 | -0.1430 | No |
| 108 | Pim1 | 12295 | -0.083 | -0.1416 | No |
| 109 | Il10 | 12317 | -0.084 | -0.1407 | No |
| 110 | Rabgap1l | 12459 | -0.091 | -0.1457 | No |
| 111 | Ptger2 | 12497 | -0.093 | -0.1454 | No |
| 112 | Slc39a8 | 12625 | -0.098 | -0.1496 | No |
| 113 | Pus1 | 12828 | -0.106 | -0.1573 | No |
| 114 | Ncoa3 | 13156 | -0.117 | -0.1711 | No |
| 115 | St3gal4 | 13173 | -0.118 | -0.1692 | No |
| 116 | Socs1 | 13349 | -0.124 | -0.1751 | No |
| 117 | Eef1akmt1 | 13529 | -0.131 | -0.1811 | No |
| 118 | Tnfrsf8 | 13576 | -0.132 | -0.1804 | No |
| 119 | Bmpr2 | 13589 | -0.133 | -0.1779 | No |
| 120 | Enpp1 | 13635 | -0.135 | -0.1771 | No |
| 121 | Irf8 | 13950 | -0.149 | -0.1894 | No |
| 122 | Ahcyl | 13961 | -0.150 | -0.1865 | No |
| 123 | Ctla4 | 14078 | -0.155 | -0.1888 | No |
| 124 | Slc1a5 | 14121 | -0.157 | -0.1873 | No |
| 125 | Lrig1 | 14253 | -0.162 | -0.1901 | No |
| 126 | Ctsz | 14320 | -0.165 | -0.1896 | No |
| 127 | Pth1r | 14433 | -0.171 | -0.1913 | No |
| 128 | Ecm1 | 14552 | -0.176 | -0.1932 | No |
| 129 | Gpx4 | 14625 | -0.180 | -0.1927 | No |
| 130 | Il4ra | 14630 | -0.180 | -0.1887 | No |
| 131 | Capg | 14974 | -0.198 | -0.2015 | No |
| 132 | Syngr2 | 15016 | -0.199 | -0.1989 | No |
| 133 | Muc1 | 15070 | -0.202 | -0.1969 | No |
| 134 | Il3ra | 15102 | -0.204 | -0.1938 | No |
| 135 | Wls | 15371 | -0.213 | -0.2024 | Yes |
| 136 | Amacr | 15411 | -0.215 | -0.1994 | Yes |
| 137 | Hipk2 | 15429 | -0.216 | -0.1952 | Yes |
| 138 | Slc29a2 | 15441 | -0.217 | -0.1908 | Yes |
| 139 | Il2ra | 15450 | -0.217 | -0.1862 | Yes |
| 140 | Irf4 | 15550 | -0.220 | -0.1861 | Yes |
| 141 | Tnfrsf18 | 15679 | -0.226 | -0.1873 | Yes |
| 142 | Gata1 | 15755 | -0.229 | -0.1858 | Yes |
| 143 | Serpinc1 | 15824 | -0.233 | -0.1838 | Yes |
| 144 | Tnfrsf4 | 16050 | -0.247 | -0.1895 | Yes |
| 145 | Rhoh | 16213 | -0.258 | -0.1917 | Yes |
| 146 | Il1rl1 | 16320 | -0.264 | -0.1909 | Yes |
| 147 | Myo1c | 16526 | -0.274 | -0.1949 | Yes |
| 148 | Ager | 16556 | -0.275 | -0.1901 | Yes |
| 149 | Ckap4 | 16677 | -0.281 | -0.1896 | Yes |
| 150 | Sell | 16906 | -0.295 | -0.1943 | Yes |
| 151 | Myc | 16912 | -0.295 | -0.1877 | Yes |
| 152 | Ikzf2 | 16938 | -0.297 | -0.1821 | Yes |
| 153 | Mxd1 | 17073 | -0.304 | -0.1819 | Yes |
| 154 | Ahnak | 17138 | -0.308 | -0.1780 | Yes |
| 155 | Plin2 | 17245 | -0.314 | -0.1760 | Yes |
| 156 | Spp1 | 17283 | -0.316 | -0.1706 | Yes |
| 157 | Ahr | 17301 | -0.317 | -0.1642 | Yes |
| 158 | Nt5e | 17399 | -0.323 | -0.1616 | Yes |
| 159 | Ndrg1 | 17530 | -0.330 | -0.1605 | Yes |
| 160 | Tnfrsf9 | 17608 | -0.335 | -0.1567 | Yes |
| 161 | Abcb1a | 17622 | -0.337 | -0.1496 | Yes |
| 162 | Dcps | 17663 | -0.340 | -0.1437 | Yes |
| 163 | Selp | 17690 | -0.341 | -0.1371 | Yes |
| 164 | Cish | 17693 | -0.342 | -0.1294 | Yes |
| 165 | Il10ra | 17850 | -0.356 | -0.1290 | Yes |
| 166 | Syt11 | 17898 | -0.359 | -0.1231 | Yes |
| 167 | Gsto1 | 17912 | -0.360 | -0.1154 | Yes |
| 168 | Serpinb6a | 17976 | -0.366 | -0.1102 | Yes |
| 169 | Adam19 | 18105 | -0.376 | -0.1079 | Yes |
| 170 | Gabarapl1 | 18250 | -0.390 | -0.1062 | Yes |
| 171 | Ccnd3 | 18452 | -0.406 | -0.1070 | Yes |
| 172 | Smpdl3a | 18533 | -0.413 | -0.1015 | Yes |
| 173 | Drc1 | 18556 | -0.416 | -0.0930 | Yes |
| 174 | Scn9a | 18627 | -0.420 | -0.0868 | Yes |
| 175 | Tnfsf10 | 19090 | -0.483 | -0.0989 | Yes |
| 176 | Batf | 19118 | -0.488 | -0.0890 | Yes |
| 177 | P2rx4 | 19497 | -0.571 | -0.0949 | Yes |
| 178 | Car2 | 19749 | -0.652 | -0.0925 | Yes |
| 179 | Casp3 | 19766 | -0.656 | -0.0781 | Yes |
| 180 | Cd48 | 19788 | -0.666 | -0.0638 | Yes |
| 181 | Gpr65 | 19875 | -0.731 | -0.0513 | Yes |
| 182 | Ifitm3 | 19896 | -0.756 | -0.0348 | Yes |
| 183 | Csf1 | 19963 | -0.856 | -0.0184 | Yes |
| 184 | Map3k8 | 19986 | -0.932 | 0.0020 | Yes |

