DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group4.GMP.neu_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.18877055
Normalized Enrichment Score (NES)0.7813529
Nominal p-value0.65652174
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cdkn2c5140.645-0.0094Yes
2Mxd37090.588-0.0041Yes
3Dck7630.5780.0080Yes
4Depdc1a8970.5450.0152Yes
5Srsf19340.5370.0272Yes
6Xpo110560.5160.0343Yes
7Cse1l13840.4680.0298Yes
8Plk114470.4600.0384Yes
9Ncapd215190.4500.0463Yes
10Lmnb115960.4390.0538Yes
11Ipo717160.4290.0587Yes
12Rad2118430.4190.0631Yes
13Cdc25b20010.4050.0656Yes
14Hnrnpd20150.4030.0752Yes
15Espl120670.3980.0828Yes
16Bub1b21830.3890.0870Yes
17Aurkb23160.3790.0900Yes
18Dlgap527760.3380.0755Yes
19Smc1a28940.3360.0782Yes
20Atad228970.3350.0867Yes
21Shmt129070.3340.0948Yes
22Melk29450.3300.1014Yes
23Top2a30050.3280.1068Yes
24Ddx39a30110.3270.1149Yes
25Syncrip30880.3210.1193Yes
26Rbbp732860.3030.1171Yes
27Kif18b34100.2950.1185Yes
28Cdc2034740.2910.1227Yes
29Phf5a34980.2880.1289Yes
30Mybl235780.2830.1322Yes
31Anp32e36980.2770.1333Yes
32Kif2c39970.2630.1250Yes
33Lbr40770.2580.1276Yes
34Dnmt141490.2530.1305Yes
35Mcm543490.2410.1266Yes
36Cdk143500.2410.1328Yes
37Birc544090.2360.1359Yes
38Ung44140.2360.1418Yes
39Nop5646050.2310.1381Yes
40Smc347020.2250.1390Yes
41Jpt147790.2230.1409Yes
42Cdca847800.2230.1466Yes
43Timeless49290.2190.1447Yes
44Msh249300.2190.1504Yes
45Cbx550240.2130.1511Yes
46Hmmr50490.2120.1553Yes
47Xrcc651320.2060.1565Yes
48Ilf351610.2050.1603Yes
49Cdkn352520.1990.1609Yes
50Mcm453110.1970.1630Yes
51Rnaseh2a53610.1940.1654Yes
52Spag553760.1930.1697Yes
53Prkdc55390.1840.1662Yes
54Tacc356450.1780.1655Yes
55Mad2l156570.1770.1695Yes
56Cenpe57440.1730.1696Yes
57Plk457510.1730.1737Yes
58Ctcf57650.1720.1775Yes
59Ube2t58040.1700.1799Yes
60Ccp11058390.1680.1825Yes
61Tubb558410.1680.1867Yes
62Mcm360180.1590.1819Yes
63Tmpo62470.1540.1744Yes
64Brms1l62850.1530.1764Yes
65Donson63040.1510.1794Yes
66Pold363110.1510.1829Yes
67Tk164000.1480.1823Yes
68Tra2b64100.1470.1856Yes
69Pttg165660.1410.1814Yes
70Ssrp165740.1400.1846Yes
71Lig166170.1380.1860Yes
72Nasp67080.1330.1849Yes
73Tubg167940.1290.1839Yes
74Mcm668150.1280.1862Yes
75Rfc168290.1270.1888Yes
76Bard170530.1180.1806No
77Mki6771650.1140.1779No
78Wdr9072690.1090.1755No
79Cdc25a73050.1080.1765No
80Asf1b73330.1070.1778No
81Nup10774070.1040.1768No
82Ezh274780.1010.1758No
83Nap1l175170.0990.1765No
84Dctpp177710.0870.1659No
85Cenpm78550.0830.1639No
86Pold179210.0810.1627No
87Wee180200.0770.1597No
88Psip180910.0740.1581No
89Kif481550.0710.1567No
90Suv39h182480.0670.1538No
91Rpa182760.0660.1541No
92Cks282810.0660.1556No
93Smc684010.0610.1512No
94Pds5b84380.0600.1509No
95Pnn84420.0590.1523No
96Eif2s184510.0590.1534No
97Stag184620.0580.1544No
98Kif2286880.0490.1443No
99Pms287440.0470.1427No
100Srsf289350.0400.1342No
101Pan289690.0390.1335No
102Nolc190040.0380.1328No
103Eed90490.0360.1314No
104Gspt190900.0340.1303No
105Mcm290980.0330.1308No
106Cnot991650.0310.1283No
107Spc2492220.0290.1262No
108Mcm793210.0240.1219No
109Prim293230.0240.1224No
110Ccne193580.0240.1213No
111Chek296330.0140.1079No
112Mms22l96420.0130.1078No
113Pa2g496860.0120.1060No
114Brca198260.0070.0991No
115Zw1098360.0060.0988No
116Hmgb298820.0040.0967No
117Nudt2199390.0020.0939No
118Rpa399410.0020.0939No
119Mre11a99860.0000.0917No
120Tbrg410168-0.0000.0826No
121H2ax10213-0.0020.0804No
122Nup20510284-0.0050.0770No
123Ccnb210345-0.0070.0742No
124Racgap110715-0.0210.0561No
125Snrpb10882-0.0270.0484No
126Ak210930-0.0290.0468No
127Mthfd211019-0.0330.0432No
128H2az111062-0.0350.0419No
129Cit11064-0.0350.0428No
130Lsm811073-0.0350.0433No
131Diaph311180-0.0400.0390No
132Ppm1d11473-0.0510.0256No
133Ube2s11602-0.0560.0205No
134Hells11616-0.0570.0213No
135Rad5011772-0.0630.0151No
136Nup15311778-0.0630.0165No
137Pold211999-0.0720.0072No
138Slbp12055-0.0740.0064No
139Exosc812319-0.084-0.0047No
140Smc412449-0.091-0.0089No
141Dut12451-0.091-0.0066No
142Pcna12454-0.091-0.0044No
143Ubr712457-0.091-0.0022No
144Chek112464-0.091-0.0001No
145Brca212500-0.0930.0005No
146Usp112579-0.096-0.0010No
147Ppp1r812867-0.108-0.0127No
148E2f812887-0.108-0.0109No
149Cks1b12941-0.110-0.0108No
150Pole413092-0.114-0.0154No
151Tipin13176-0.118-0.0166No
152Lyar13337-0.124-0.0215No
153Trip1313515-0.130-0.0271No
154Dek13540-0.131-0.0250No
155Aurka13694-0.138-0.0291No
156Dclre1b13782-0.142-0.0299No
157Hmga1b13824-0.144-0.0283No
158Pole13873-0.146-0.0270No
159Luc7l313921-0.148-0.0255No
160Prps114006-0.152-0.0259No
161Rfc214129-0.157-0.0280No
162Ranbp114192-0.159-0.0271No
163Mlh114469-0.173-0.0366No
164Paics14735-0.185-0.0452No
165Psmc3ip14775-0.187-0.0424No
166Spc2515024-0.200-0.0498No
167Nbn15145-0.206-0.0505No
168Asf1a15413-0.215-0.0585No
169Rrm215508-0.219-0.0576No
170Trp5315777-0.230-0.0653No
171Pop715795-0.232-0.0602No
172Orc216101-0.250-0.0692No
173Pola216399-0.268-0.0773No
174Gins416672-0.281-0.0838No
175Cdkn1b16691-0.283-0.0775No
176Myc16912-0.295-0.0810No
177Cdk416993-0.301-0.0774No
178Dscc117059-0.303-0.0729No
179Tfrc17154-0.309-0.0697No
180Gins317457-0.327-0.0766No
181Rad117462-0.327-0.0684No
182Hmgb317540-0.331-0.0638No
183Ing317562-0.332-0.0564No
184Nme117620-0.336-0.0506No
185Hus117915-0.360-0.0562No
186Ran18130-0.378-0.0574No
187Rad51c18183-0.384-0.0502No
188Rad51ap118418-0.403-0.0516No
189Rpa218522-0.411-0.0463No
190Tcf1918788-0.440-0.0484No
191Gins119009-0.472-0.0474No
192Orc619049-0.477-0.0372No
193Prdx419458-0.562-0.0434No
194Rfc319505-0.572-0.0311No
195Cdkn1a19559-0.586-0.0187No
196Stmn119905-0.772-0.0164No
197Cdca319972-0.8760.0027No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS