Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group4.GMP.neu_Pheno.cls #Group1_versus_Group4_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.25577816
Normalized Enrichment Score (NES)	-1.1165297
Nominal p-value	0.27272728
FDR q-value	0.87055475
FWER p-Value	0.963

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Ets1	266	0.771	0.0099	No
2	Cd74	447	0.673	0.0212	No
3	Zap70	684	0.590	0.0272	No
4	Egfr	713	0.588	0.0435	No
5	Tlr2	1108	0.512	0.0392	No
6	Traf2	1217	0.500	0.0489	No
7	Itgal	1366	0.471	0.0557	No
8	Tnf	1411	0.465	0.0675	No
9	Akt1	1556	0.445	0.0737	No
10	Cd4	1635	0.436	0.0830	No
11	Crtam	1662	0.433	0.0948	No
12	Il18rap	1912	0.414	0.0948	No
13	Dyrk3	2137	0.395	0.0954	No
14	Stat1	2395	0.370	0.0937	No
15	Eif3a	3172	0.313	0.0641	No
16	Cd247	3191	0.311	0.0726	No
17	Prkcb	3444	0.292	0.0688	No
18	Ripk2	4176	0.252	0.0397	No
19	Ccr5	4318	0.243	0.0399	No
20	Rpl3l	4788	0.223	0.0231	No
21	Flna	4887	0.221	0.0248	No
22	H2-Aa	4947	0.218	0.0284	No
23	Eif4g3	5009	0.214	0.0318	No
24	Galnt1	5154	0.205	0.0308	No
25	Hif1a	5224	0.201	0.0334	No
26	Tap1	5342	0.195	0.0334	No
27	Tapbp	5443	0.189	0.0341	No
28	Nlrp3	5492	0.186	0.0373	No
29	F2r	5669	0.177	0.0338	No
30	Tgfb2	5721	0.174	0.0365	No
31	Il18	5745	0.173	0.0406	No
32	Was	5758	0.173	0.0452	No
33	Abce1	5826	0.169	0.0469	No
34	Hdac9	5987	0.161	0.0437	No
35	H2-Ob	6027	0.158	0.0466	No
36	Tlr6	6391	0.148	0.0328	No
37	Itgb2	6978	0.122	0.0070	No
38	Inhba	7142	0.114	0.0023	No
39	Itk	7475	0.101	-0.0114	No
40	Ltb	7631	0.094	-0.0163	No
41	Ptpn6	7640	0.093	-0.0139	No
42	Abi1	7735	0.089	-0.0160	No
43	Ncf4	7889	0.082	-0.0212	No
44	Lcp2	8151	0.072	-0.0321	No
45	Hcls1	8264	0.067	-0.0358	No
46	Ccr2	8398	0.061	-0.0406	No
47	Rpl9	8870	0.043	-0.0630	No
48	Ccnd2	8888	0.043	-0.0625	No
49	Ly75	8896	0.042	-0.0616	No
50	Mrpl3	8911	0.042	-0.0611	No
51	Jak2	8983	0.039	-0.0635	No
52	Eif3j1	9168	0.031	-0.0718	No
53	Bcl3	9169	0.031	-0.0708	No
54	Degs1	9313	0.025	-0.0773	No
55	Cd86	9398	0.023	-0.0808	No
56	Cd79a	9482	0.020	-0.0844	No
57	Wars1	9531	0.018	-0.0863	No
58	Tap2	9611	0.015	-0.0898	No
59	Cd80	9620	0.014	-0.0898	No
60	Tlr3	9664	0.012	-0.0916	No
61	Fas	9736	0.010	-0.0948	No
62	Brca1	9826	0.007	-0.0991	No
63	Fcgr2b	9865	0.005	-0.1009	No
64	Cd28	9925	0.003	-0.1038	No
65	Cd40	10003	0.000	-0.1076	No
66	Il2	10020	0.000	-0.1084	No
67	Il12a	10197	-0.002	-0.1172	No
68	Rps3a1	10617	-0.018	-0.1378	No
69	Tpd52	10625	-0.018	-0.1376	No
70	Csk	10659	-0.019	-0.1387	No
71	Map3k7	10683	-0.020	-0.1392	No
72	Ifngr1	10716	-0.021	-0.1402	No
73	Il7	10921	-0.028	-0.1496	No
74	Cd1d2	11085	-0.036	-0.1567	No
75	Lyn	11326	-0.045	-0.1674	No
76	Glmn	11470	-0.051	-0.1730	No
77	Stab1	11496	-0.052	-0.1727	No
78	Srgn	11826	-0.066	-0.1873	No
79	Tlr1	11839	-0.066	-0.1859	No
80	Nck1	11852	-0.067	-0.1845	No
81	Il10	12317	-0.084	-0.2053	No
82	Il12rb1	12670	-0.100	-0.2199	No
83	Il27ra	12718	-0.102	-0.2192	No
84	Lck	12912	-0.109	-0.2256	No
85	Igsf6	13032	-0.114	-0.2282	No
86	H2-DMb2	13217	-0.119	-0.2338	No
87	Il11	13318	-0.123	-0.2351	No
88	Socs1	13349	-0.124	-0.2329	No
89	Il16	13544	-0.131	-0.2387	No
90	Cd47	13611	-0.134	-0.2380	No
91	Npm1	13723	-0.139	-0.2393	No
92	Stat4	13738	-0.140	-0.2358	No
93	Irf8	13950	-0.149	-0.2419	No
94	Bcl10	14033	-0.153	-0.2414	No
95	Trat1	14208	-0.160	-0.2453	No
96	Icosl	14255	-0.162	-0.2428	No
97	Socs5	14306	-0.164	-0.2403	No
98	Ptprc	14562	-0.177	-0.2478	No
99	Il4ra	14630	-0.180	-0.2457	No
100	Fgr	14831	-0.190	-0.2500	Yes
101	Elane	14894	-0.194	-0.2473	Yes
102	H2-Oa	14912	-0.195	-0.2423	Yes
103	Capg	14974	-0.198	-0.2394	Yes
104	St8sia4	14976	-0.198	-0.2334	Yes
105	Mtif2	15108	-0.204	-0.2338	Yes
106	Ube2n	15362	-0.212	-0.2401	Yes
107	Il2ra	15450	-0.217	-0.2380	Yes
108	Irf4	15550	-0.220	-0.2363	Yes
109	Spi1	15871	-0.236	-0.2452	Yes
110	Psmb10	15901	-0.237	-0.2395	Yes
111	Eif5a	15962	-0.241	-0.2353	Yes
112	Acvr2a	16010	-0.244	-0.2302	Yes
113	Elf4	16061	-0.248	-0.2252	Yes
114	Eif3d	16412	-0.268	-0.2347	Yes
115	Ctss	16561	-0.275	-0.2339	Yes
116	Cd96	16635	-0.279	-0.2291	Yes
117	Bcat1	16647	-0.280	-0.2212	Yes
118	Ly86	16869	-0.293	-0.2235	Yes
119	Gcnt1	16992	-0.301	-0.2205	Yes
120	Map4k1	17055	-0.303	-0.2145	Yes
121	Ikbkb	17171	-0.311	-0.2109	Yes
122	Rps9	17326	-0.318	-0.2090	Yes
123	Ube2d1	17468	-0.327	-0.2062	Yes
124	Ifngr2	17526	-0.330	-0.1991	Yes
125	Nme1	17620	-0.336	-0.1936	Yes
126	Irf7	17630	-0.337	-0.1839	Yes
127	Tgfb1	17835	-0.355	-0.1834	Yes
128	Ccr1	18057	-0.372	-0.1833	Yes
129	Il4	18061	-0.372	-0.1722	Yes
130	Prkcg	18188	-0.384	-0.1669	Yes
131	Ccnd3	18452	-0.406	-0.1679	Yes
132	Ache	19087	-0.483	-0.1852	Yes
133	H2-DMa	19240	-0.515	-0.1773	Yes
134	Cfp	19289	-0.525	-0.1638	Yes
135	Il2rg	19358	-0.537	-0.1510	Yes
136	Il15	19360	-0.537	-0.1348	Yes
137	Ifnar2	19421	-0.551	-0.1212	Yes
138	Thy1	19430	-0.554	-0.1048	Yes
139	Icam1	19617	-0.601	-0.0960	Yes
140	B2m	19702	-0.634	-0.0810	Yes
141	Pf4	19790	-0.666	-0.0653	Yes
142	Gpr65	19875	-0.731	-0.0474	Yes
143	Csf1	19963	-0.856	-0.0259	Yes
144	C2	19992	-0.959	0.0017	Yes