| Dataset | GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | GMP.neu_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_UV_RESPONSE_DN |
| Enrichment Score (ES) | -0.21143074 |
| Normalized Enrichment Score (NES) | -1.025931 |
| Nominal p-value | 0.4213592 |
| FDR q-value | 0.74885976 |
| FWER p-Value | 0.987 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Irs1 | 574 | 0.563 | -0.0068 | No |
| 2 | Apbb2 | 710 | 0.521 | 0.0068 | No |
| 3 | Magi2 | 860 | 0.488 | 0.0184 | No |
| 4 | Mmp16 | 1291 | 0.424 | 0.0134 | No |
| 5 | Itgb3 | 1377 | 0.411 | 0.0252 | No |
| 6 | Met | 1514 | 0.395 | 0.0338 | No |
| 7 | Scn8a | 1655 | 0.379 | 0.0416 | No |
| 8 | Synj2 | 1759 | 0.368 | 0.0509 | No |
| 9 | Col1a2 | 1986 | 0.345 | 0.0530 | No |
| 10 | Cap2 | 2626 | 0.295 | 0.0324 | No |
| 11 | Ptprm | 2876 | 0.278 | 0.0308 | No |
| 12 | Phf3 | 2998 | 0.269 | 0.0352 | No |
| 13 | Acvr2a | 3086 | 0.264 | 0.0412 | No |
| 14 | Nr1d2 | 3300 | 0.252 | 0.0403 | No |
| 15 | Nrp1 | 3393 | 0.245 | 0.0453 | No |
| 16 | Sdc2 | 3594 | 0.233 | 0.0443 | No |
| 17 | Notch2 | 4009 | 0.216 | 0.0320 | No |
| 18 | Kcnma1 | 4064 | 0.215 | 0.0377 | No |
| 19 | Mios | 4277 | 0.205 | 0.0351 | No |
| 20 | Ythdc1 | 4302 | 0.203 | 0.0418 | No |
| 21 | Dyrk1a | 4307 | 0.203 | 0.0496 | No |
| 22 | Col5a2 | 4344 | 0.201 | 0.0556 | No |
| 23 | Dusp1 | 4373 | 0.200 | 0.0620 | No |
| 24 | Atp2b1 | 4485 | 0.195 | 0.0641 | No |
| 25 | Atrx | 4632 | 0.188 | 0.0641 | No |
| 26 | F3 | 4684 | 0.186 | 0.0688 | No |
| 27 | Map1b | 4725 | 0.184 | 0.0740 | No |
| 28 | Tjp1 | 4913 | 0.175 | 0.0715 | No |
| 29 | Pten | 4930 | 0.175 | 0.0776 | No |
| 30 | Sfmbt1 | 5050 | 0.170 | 0.0782 | No |
| 31 | Wdr37 | 5072 | 0.169 | 0.0838 | No |
| 32 | Tent4a | 5631 | 0.145 | 0.0614 | No |
| 33 | Cdc42bpa | 5697 | 0.142 | 0.0637 | No |
| 34 | Rasa2 | 5709 | 0.141 | 0.0687 | No |
| 35 | Slc22a18 | 5768 | 0.138 | 0.0712 | No |
| 36 | Atp2c1 | 5838 | 0.135 | 0.0730 | No |
| 37 | Bmpr1a | 5912 | 0.132 | 0.0745 | No |
| 38 | Pex14 | 5925 | 0.131 | 0.0790 | No |
| 39 | Smad3 | 5954 | 0.130 | 0.0827 | No |
| 40 | Cdk13 | 6182 | 0.122 | 0.0761 | No |
| 41 | Spop | 6361 | 0.114 | 0.0716 | No |
| 42 | Pdlim5 | 6599 | 0.105 | 0.0638 | No |
| 43 | Dlg1 | 6605 | 0.105 | 0.0676 | No |
| 44 | Sipa1l1 | 7205 | 0.082 | 0.0407 | No |
| 45 | Nr3c1 | 7275 | 0.080 | 0.0404 | No |
| 46 | Celf2 | 7324 | 0.078 | 0.0410 | No |
| 47 | Prdm2 | 7533 | 0.072 | 0.0334 | No |
| 48 | Bhlhe40 | 7721 | 0.065 | 0.0265 | No |
| 49 | Tgfbr3 | 7951 | 0.055 | 0.0172 | No |
| 50 | Vav2 | 7982 | 0.054 | 0.0178 | No |
| 51 | Prkar2b | 8015 | 0.053 | 0.0182 | No |
| 52 | Nek7 | 8074 | 0.051 | 0.0173 | No |
| 53 | Ptpn21 | 8214 | 0.045 | 0.0121 | No |
| 54 | Scaf8 | 8242 | 0.044 | 0.0125 | No |
| 55 | Togaram1 | 8342 | 0.040 | 0.0091 | No |
| 56 | Mta1 | 8414 | 0.038 | 0.0070 | No |
| 57 | Add3 | 8446 | 0.037 | 0.0069 | No |
| 58 | Map2k5 | 8508 | 0.034 | 0.0051 | No |
| 59 | Grk5 | 8580 | 0.032 | 0.0028 | No |
| 60 | Tfpi | 8684 | 0.028 | -0.0013 | No |
| 61 | Kit | 8920 | 0.020 | -0.0123 | No |
| 62 | Cdon | 9006 | 0.017 | -0.0159 | No |
| 63 | Nipbl | 9078 | 0.015 | -0.0189 | No |
| 64 | Syne1 | 9282 | 0.007 | -0.0288 | No |
| 65 | Lamc1 | 9322 | 0.006 | -0.0305 | No |
| 66 | Cdkn1b | 9370 | 0.004 | -0.0327 | No |
| 67 | Abcc1 | 9404 | 0.003 | -0.0343 | No |
| 68 | Col1a1 | 9476 | 0.000 | -0.0378 | No |
| 69 | Mrps31 | 9553 | -0.000 | -0.0417 | No |
| 70 | Rnd3 | 9779 | -0.008 | -0.0527 | No |
| 71 | Adgrl2 | 10079 | -0.018 | -0.0670 | No |
| 72 | Zmiz1 | 10183 | -0.022 | -0.0713 | No |
| 73 | Akt3 | 10404 | -0.029 | -0.0812 | No |
| 74 | Pik3cd | 10476 | -0.032 | -0.0836 | No |
| 75 | Atp2b4 | 10486 | -0.032 | -0.0828 | No |
| 76 | Mt1 | 10556 | -0.035 | -0.0849 | No |
| 77 | Igf1r | 10744 | -0.042 | -0.0926 | No |
| 78 | Plpp3 | 10824 | -0.045 | -0.0949 | No |
| 79 | Ldlr | 11202 | -0.058 | -0.1116 | No |
| 80 | Mapk14 | 11427 | -0.065 | -0.1203 | No |
| 81 | Nfkb1 | 11534 | -0.068 | -0.1229 | No |
| 82 | Smad7 | 11742 | -0.077 | -0.1303 | No |
| 83 | Bckdhb | 11893 | -0.083 | -0.1346 | No |
| 84 | Amph | 11908 | -0.084 | -0.1320 | No |
| 85 | Slc7a1 | 11915 | -0.084 | -0.1290 | No |
| 86 | Atrn | 12216 | -0.095 | -0.1404 | No |
| 87 | Nfib | 12426 | -0.104 | -0.1468 | No |
| 88 | Pparg | 12457 | -0.105 | -0.1443 | No |
| 89 | Aggf1 | 12467 | -0.105 | -0.1406 | No |
| 90 | Inpp4b | 13022 | -0.124 | -0.1636 | No |
| 91 | Schip1 | 13131 | -0.129 | -0.1640 | No |
| 92 | Pdgfrb | 13201 | -0.132 | -0.1623 | No |
| 93 | Atxn1 | 13429 | -0.140 | -0.1682 | No |
| 94 | Ica1 | 13875 | -0.158 | -0.1844 | No |
| 95 | Cacna1a | 14164 | -0.170 | -0.1922 | No |
| 96 | Prkce | 14377 | -0.178 | -0.1958 | No |
| 97 | Runx1 | 14564 | -0.185 | -0.1979 | No |
| 98 | Lpar1 | 14612 | -0.187 | -0.1930 | No |
| 99 | Fhl2 | 14775 | -0.195 | -0.1935 | No |
| 100 | Cav1 | 14846 | -0.198 | -0.1893 | No |
| 101 | Anxa2 | 15288 | -0.221 | -0.2028 | Yes |
| 102 | Sri | 15311 | -0.222 | -0.1952 | Yes |
| 103 | Insig1 | 15447 | -0.228 | -0.1931 | Yes |
| 104 | Dlc1 | 15552 | -0.232 | -0.1892 | Yes |
| 105 | Id1 | 15694 | -0.238 | -0.1870 | Yes |
| 106 | Mgll | 15790 | -0.244 | -0.1822 | Yes |
| 107 | Tgfbr2 | 15857 | -0.248 | -0.1758 | Yes |
| 108 | Fbln5 | 15911 | -0.250 | -0.1687 | Yes |
| 109 | Dmac2l | 16290 | -0.269 | -0.1772 | Yes |
| 110 | Gja1 | 16446 | -0.280 | -0.1740 | Yes |
| 111 | Adora2b | 16725 | -0.294 | -0.1765 | Yes |
| 112 | Rbpms | 16948 | -0.307 | -0.1756 | Yes |
| 113 | Prkca | 17209 | -0.322 | -0.1760 | Yes |
| 114 | Ddah1 | 17220 | -0.323 | -0.1639 | Yes |
| 115 | Mgmt | 17693 | -0.354 | -0.1737 | Yes |
| 116 | Ltbp1 | 17731 | -0.357 | -0.1616 | Yes |
| 117 | Kalrn | 17837 | -0.365 | -0.1526 | Yes |
| 118 | Plcb4 | 17934 | -0.374 | -0.1428 | Yes |
| 119 | Dbp | 17954 | -0.375 | -0.1291 | Yes |
| 120 | Gcnt1 | 18196 | -0.397 | -0.1257 | Yes |
| 121 | Vldlr | 18247 | -0.402 | -0.1124 | Yes |
| 122 | Col11a1 | 18350 | -0.413 | -0.1014 | Yes |
| 123 | Rxra | 18388 | -0.416 | -0.0869 | Yes |
| 124 | Dab2 | 18604 | -0.438 | -0.0806 | Yes |
| 125 | Pik3r3 | 19102 | -0.502 | -0.0859 | Yes |
| 126 | Cited2 | 19197 | -0.519 | -0.0704 | Yes |
| 127 | Pias3 | 19246 | -0.528 | -0.0521 | Yes |
| 128 | Myc | 19254 | -0.530 | -0.0317 | Yes |
| 129 | Anxa4 | 19300 | -0.539 | -0.0129 | Yes |
| 130 | Fyn | 19539 | -0.593 | -0.0017 | Yes |
| 131 | Arhgef9 | 19759 | -0.666 | 0.0134 | Yes |

