Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | GMP.neu_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY |
| Enrichment Score (ES) | -0.3840167 |
| Normalized Enrichment Score (NES) | -1.3302145 |
| Nominal p-value | 0.16179337 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.746 |
| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Pdlim1 | 984 | 0.464 | -0.0008 | No |
| 2 | Lsp1 | 1652 | 0.380 | 0.0055 | No |
| 3 | Nqo1 | 3082 | 0.265 | -0.0384 | No |
| 4 | G6pdx | 3838 | 0.221 | -0.0531 | No |
| 5 | Oxsr1 | 5240 | 0.161 | -0.1064 | No |
| 6 | Gpx4 | 5307 | 0.158 | -0.0933 | No |
| 7 | Prdx1 | 5453 | 0.153 | -0.0846 | No |
| 8 | Hmox2 | 5622 | 0.146 | -0.0778 | No |
| 9 | Scaf4 | 5759 | 0.138 | -0.0702 | No |
| 10 | Mbp | 6817 | 0.096 | -0.1130 | No |
| 11 | Msra | 6838 | 0.096 | -0.1040 | No |
| 12 | Pfkp | 6841 | 0.096 | -0.0941 | No |
| 13 | Prdx4 | 7789 | 0.062 | -0.1350 | No |
| 14 | Txnrd1 | 7997 | 0.054 | -0.1398 | No |
| 15 | Gsr | 8737 | 0.027 | -0.1740 | No |
| 16 | Txnrd2 | 8961 | 0.018 | -0.1833 | No |
| 17 | Glrx2 | 9148 | 0.012 | -0.1913 | No |
| 18 | Egln2 | 9230 | 0.009 | -0.1944 | No |
| 19 | Abcc1 | 9404 | 0.003 | -0.2028 | No |
| 20 | Stk25 | 9812 | -0.009 | -0.2222 | No |
| 21 | Mpo | 9831 | -0.009 | -0.2221 | No |
| 22 | Ercc2 | 10070 | -0.017 | -0.2322 | No |
| 23 | Gpx3 | 10098 | -0.018 | -0.2317 | No |
| 24 | Fes | 10192 | -0.022 | -0.2341 | No |
| 25 | Sbno2 | 10327 | -0.026 | -0.2380 | No |
| 26 | Prnp | 10673 | -0.039 | -0.2512 | No |
| 27 | Sod2 | 11415 | -0.064 | -0.2816 | No |
| 28 | Txn1 | 12148 | -0.092 | -0.3086 | No |
| 29 | Ndufa6 | 12571 | -0.110 | -0.3183 | No |
| 30 | Glrx | 13023 | -0.124 | -0.3279 | No |
| 31 | Ipcef1 | 13938 | -0.160 | -0.3569 | No |
| 32 | Hhex | 14481 | -0.183 | -0.3650 | Yes |
| 33 | Lamtor5 | 14668 | -0.190 | -0.3545 | Yes |
| 34 | Gclc | 14727 | -0.193 | -0.3373 | Yes |
| 35 | Prdx6 | 15030 | -0.207 | -0.3308 | Yes |
| 36 | Sod1 | 15622 | -0.236 | -0.3357 | Yes |
| 37 | Gclm | 16155 | -0.262 | -0.3351 | Yes |
| 38 | Selenos | 16286 | -0.269 | -0.3135 | Yes |
| 39 | Ptpa | 16500 | -0.282 | -0.2947 | Yes |
| 40 | Cat | 17361 | -0.331 | -0.3032 | Yes |
| 41 | Ndufs2 | 17691 | -0.354 | -0.2827 | Yes |
| 42 | Mgst1 | 18819 | -0.463 | -0.2907 | Yes |
| 43 | Junb | 18938 | -0.479 | -0.2467 | Yes |
| 44 | Ftl1 | 19107 | -0.504 | -0.2025 | Yes |
| 45 | Atox1 | 19362 | -0.551 | -0.1577 | Yes |
| 46 | Srxn1 | 19394 | -0.556 | -0.1012 | Yes |
| 47 | Cdkn2d | 19517 | -0.587 | -0.0461 | Yes |
| 48 | Prdx2 | 19796 | -0.685 | 0.0115 | Yes |
