Details for gene set HALLMARK_P53

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_P53_PATHWAY
Enrichment Score (ES)	-0.21362537
Normalized Enrichment Score (NES)	-1.037525
Nominal p-value	0.38535646
FDR q-value	0.75445294
FWER p-Value	0.985

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hmox1	86	0.843	0.0168	No
2	Plk2	116	0.818	0.0358	No
3	Klf4	190	0.736	0.0505	No
4	Tgfa	307	0.656	0.0611	No
5	Aen	465	0.587	0.0678	No
6	Jun	910	0.477	0.0574	No
7	Sphk1	1194	0.434	0.0540	No
8	Dcxr	1334	0.416	0.0574	No
9	Fgf13	1448	0.401	0.0618	No
10	Alox8	1744	0.370	0.0561	No
11	Iscu	2009	0.344	0.0514	No
12	Atf3	2297	0.323	0.0451	No
13	Itgb4	2356	0.318	0.0501	No
14	Stom	2381	0.316	0.0568	No
15	Rab40c	2479	0.307	0.0596	No
16	Rrad	2535	0.302	0.0644	No
17	Ephx1	2577	0.299	0.0698	No
18	Mdm2	2656	0.292	0.0732	No
19	Foxo3	2690	0.290	0.0788	No
20	Sfn	2703	0.288	0.0854	No
21	Abcc5	2768	0.284	0.0892	No
22	Rad9a	2877	0.278	0.0907	No
23	Trafd1	2924	0.274	0.0953	No
24	Ldhb	2956	0.272	0.1005	No
25	Polh	3094	0.264	0.1002	No
26	Ddb2	3457	0.240	0.0880	No
27	Nudt15	3674	0.230	0.0829	No
28	Eps8l2	3934	0.218	0.0753	No
29	Elp1	4177	0.210	0.0683	No
30	Slc3a2	4286	0.204	0.0680	No
31	Btg1	4418	0.198	0.0664	No
32	Hdac3	4426	0.197	0.0709	No
33	Cdh13	4643	0.187	0.0647	No
34	H2ac25	4646	0.187	0.0693	No
35	Hexim1	4769	0.182	0.0677	No
36	Cd82	4839	0.179	0.0687	No
37	Prkab1	5205	0.163	0.0544	No
38	Kif13b	5274	0.159	0.0550	No
39	Ercc5	5292	0.159	0.0581	No
40	Hspa4l	5418	0.154	0.0556	No
41	Rhbdf2	5512	0.150	0.0547	No
42	Sat1	5528	0.150	0.0577	No
43	Ppp1r15a	5618	0.146	0.0569	No
44	Ccnk	5757	0.138	0.0534	No
45	Pom121	5771	0.138	0.0562	No
46	Ccp110	5902	0.132	0.0529	No
47	H2aj	5904	0.132	0.0562	No
48	Gadd45a	6086	0.125	0.0502	No
49	Slc7a11	6133	0.124	0.0510	No
50	Cyfip2	6333	0.116	0.0438	No
51	Fdxr	6508	0.108	0.0378	No
52	Tap1	6509	0.108	0.0405	No
53	Rpl18	6529	0.108	0.0422	No
54	Fam162a	6602	0.105	0.0412	No
55	Tob1	6750	0.099	0.0363	No
56	Slc35d1	7004	0.090	0.0258	No
57	Bax	7018	0.089	0.0274	No
58	Notch1	7162	0.083	0.0222	No
59	Tchh	7449	0.075	0.0097	No
60	Apaf1	7522	0.072	0.0079	No
61	S100a10	7581	0.070	0.0067	No
62	Sesn1	7585	0.070	0.0083	No
63	Zfp36l1	7770	0.063	0.0006	No
64	Ada	7874	0.059	-0.0031	No
65	Baiap2	7958	0.055	-0.0059	No
66	Sp1	8142	0.049	-0.0139	No
67	Abat	8198	0.046	-0.0155	No
68	Jag2	8202	0.046	-0.0145	No
69	Tnfsf9	8208	0.046	-0.0136	No
70	Gls2	8212	0.046	-0.0126	No
71	Prmt2	8569	0.032	-0.0298	No
72	Triap1	8663	0.029	-0.0337	No
73	Nol8	8758	0.026	-0.0378	No
74	Fbxw7	8810	0.024	-0.0398	No
75	Dram1	8904	0.020	-0.0440	No
76	Tax1bp3	9010	0.017	-0.0488	No
77	Hbegf	9179	0.011	-0.0570	No
78	Mapkapk3	9609	-0.002	-0.0786	No
79	Hras	9670	-0.004	-0.0815	No
80	Wrap73	9766	-0.007	-0.0861	No
81	Csrnp2	9776	-0.008	-0.0864	No
82	Txnip	9873	-0.011	-0.0909	No
83	Rb1	9943	-0.013	-0.0941	No
84	Cdkn1a	10117	-0.019	-0.1023	No
85	H1f2	10318	-0.026	-0.1117	No
86	Acvr1b	10593	-0.036	-0.1246	No
87	Ccng1	10636	-0.038	-0.1258	No
88	Pcna	10657	-0.039	-0.1259	No
89	Mknk2	10682	-0.040	-0.1261	No
90	Cdkn2aip	10796	-0.044	-0.1307	No
91	Ptpn14	10916	-0.048	-0.1355	No
92	Procr	10936	-0.049	-0.1352	No
93	Irag2	11083	-0.054	-0.1412	No
94	Ei24	11120	-0.055	-0.1416	No
95	Tspyl2	11194	-0.057	-0.1439	No
96	Plk3	11500	-0.067	-0.1576	No
97	Ppm1d	11614	-0.072	-0.1615	No
98	Rpl36	11731	-0.077	-0.1654	No
99	Mxd4	11838	-0.081	-0.1687	No
100	Ifi30	11931	-0.084	-0.1712	No
101	F2r	12120	-0.091	-0.1784	No
102	Def6	12300	-0.098	-0.1850	No
103	Cdk5r1	12496	-0.106	-0.1922	No
104	Btg2	12511	-0.107	-0.1902	No
105	Trp53	12517	-0.107	-0.1878	No
106	Osgin1	12563	-0.109	-0.1873	No
107	Ip6k2	12616	-0.111	-0.1871	No
108	Rps27l	12798	-0.119	-0.1933	No
109	Hint1	12916	-0.121	-0.1961	No
110	Vdr	13041	-0.125	-0.1993	No
111	Casp1	13117	-0.129	-0.1998	No
112	Dnttip2	13155	-0.130	-0.1984	No
113	Rnf19b	13177	-0.131	-0.1962	No
114	Fuca1	13223	-0.133	-0.1952	No
115	Slc19a2	13226	-0.133	-0.1919	No
116	St14	13333	-0.137	-0.1939	No
117	Ndrg1	13369	-0.138	-0.1922	No
118	App	13372	-0.138	-0.1888	No
119	Mxd1	13460	-0.142	-0.1896	No
120	Ctsf	13530	-0.144	-0.1895	No
121	Sec61a1	13577	-0.146	-0.1882	No
122	Bak1	13708	-0.151	-0.1910	No
123	Rap2b	13710	-0.151	-0.1872	No
124	Tsc22d1	13714	-0.151	-0.1836	No
125	Pidd1	13868	-0.158	-0.1874	No
126	Ninj1	13870	-0.158	-0.1835	No
127	Wwp1	13972	-0.162	-0.1845	No
128	Pdgfa	13990	-0.163	-0.1813	No
129	Tm7sf3	14073	-0.166	-0.1813	No
130	Tprkb	14183	-0.171	-0.1825	No
131	Retsat	14434	-0.181	-0.1906	No
132	Ptpre	14843	-0.198	-0.2062	No
133	Ccnd3	14901	-0.201	-0.2040	No
134	Coq8a	15039	-0.207	-0.2057	No
135	Rchy1	15167	-0.214	-0.2068	No
136	Ctsd	15226	-0.217	-0.2043	No
137	Zmat3	15413	-0.227	-0.2080	Yes
138	S100a4	15465	-0.229	-0.2048	Yes
139	Ier5	15500	-0.229	-0.2008	Yes
140	Cebpa	15571	-0.233	-0.1985	Yes
141	Xpc	15645	-0.237	-0.1962	Yes
142	Pitpnc1	15707	-0.239	-0.1933	Yes
143	Trib3	15743	-0.242	-0.1890	Yes
144	Tcn2	16034	-0.255	-0.1973	Yes
145	Zbtb16	16056	-0.256	-0.1919	Yes
146	Socs1	16103	-0.259	-0.1877	Yes
147	Pmm1	16127	-0.260	-0.1824	Yes
148	Dgka	16196	-0.264	-0.1792	Yes
149	Fos	16197	-0.264	-0.1726	Yes
150	Nupr1	16231	-0.265	-0.1677	Yes
151	Perp	16368	-0.274	-0.1677	Yes
152	Ak1	16604	-0.289	-0.1723	Yes
153	Vwa5a	16643	-0.291	-0.1669	Yes
154	Rrp8	16787	-0.299	-0.1666	Yes
155	Ccnd2	16936	-0.307	-0.1664	Yes
156	Plxnb2	17043	-0.313	-0.1640	Yes
157	Steap3	17267	-0.326	-0.1670	Yes
158	Tgfb1	17328	-0.329	-0.1618	Yes
159	Ddit4	17332	-0.330	-0.1537	Yes
160	Trp63	17441	-0.337	-0.1507	Yes
161	Rps12	17465	-0.338	-0.1434	Yes
162	Pvt1	17571	-0.345	-0.1401	Yes
163	Blcap	17779	-0.360	-0.1415	Yes
164	Rgs16	17858	-0.367	-0.1362	Yes
165	Rad51c	17885	-0.370	-0.1283	Yes
166	Sdc1	17969	-0.377	-0.1231	Yes
167	Klk8	17995	-0.378	-0.1149	Yes
168	Cgrrf1	18032	-0.381	-0.1071	Yes
169	Rack1	18237	-0.401	-0.1074	Yes
170	Cd81	18276	-0.406	-0.0991	Yes
171	Rxra	18388	-0.416	-0.0943	Yes
172	Irak1	18446	-0.424	-0.0866	Yes
173	Sertad3	18842	-0.466	-0.0948	Yes
174	Abhd4	18898	-0.474	-0.0858	Yes
175	Ralgds	19051	-0.494	-0.0811	Yes
176	Ankra2	19204	-0.520	-0.0757	Yes
177	Fas	19313	-0.541	-0.0676	Yes
178	Ier3	19366	-0.551	-0.0564	Yes
179	Ddit3	19507	-0.585	-0.0489	Yes
180	Tpd52l1	19546	-0.593	-0.0359	Yes
181	Vamp8	19681	-0.638	-0.0267	Yes
182	Gm2a	19808	-0.695	-0.0157	Yes
183	Traf4	20012	-1.065	0.0007	Yes