DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group3.GMP.neu_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class0
GeneSetHALLMARK_MITOTIC_SPINDLE
Enrichment Score (ES)0.37295353
Normalized Enrichment Score (NES)1.8099823
Nominal p-value0.0020449897
FDR q-value0.027531411
FWER p-Value0.044
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_MITOTIC_SPINDLE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fgd6430.9440.0231Yes
2Fgd41250.8050.0405Yes
3Arfip22650.6790.0517Yes
4Arhgap56080.5510.0491Yes
5Cntrob8330.4950.0511Yes
6Synpo8890.4810.0612Yes
7Tubgcp68960.4790.0736Yes
8Sptan110220.4590.0796Yes
9Bin112010.4330.0822Yes
10Kptn12260.4300.0925Yes
11Myh916460.3800.0815Yes
12Incenp17130.3730.0882Yes
13Kif1b17200.3720.0978Yes
14Arap317770.3650.1048Yes
15Kntc117880.3640.1140Yes
16Bcr19310.3510.1162Yes
17Cep19220190.3440.1210Yes
18Kif2320220.3430.1301Yes
19Klc120480.3410.1380Yes
20Rasa120610.3400.1465Yes
21Kif2220780.3390.1547Yes
22Nek221460.3350.1603Yes
23Sun221510.3350.1691Yes
24Ckap522290.3290.1740Yes
25Farp122320.3290.1826Yes
26Dync1h122670.3260.1896Yes
27Kif2c23200.3200.1956Yes
28Stau123530.3180.2025Yes
29Smc324050.3140.2083Yes
30Mid125870.2980.2071Yes
31Cenpe26240.2950.2132Yes
32Myo1e27120.2880.2165Yes
33Ppp4r227280.2870.2234Yes
34Kif3c27430.2860.2304Yes
35Cntrl27610.2850.2371Yes
36Ranbp927940.2820.2430Yes
37Numa127980.2820.2504Yes
38Lmnb128890.2770.2533Yes
39Anln28970.2760.2603Yes
40Cdk5rap229110.2750.2670Yes
41Abr29260.2740.2736Yes
42Tubd129410.2730.2802Yes
43Cdk129470.2730.2873Yes
44Top2a29770.2710.2930Yes
45Birc529960.2690.2993Yes
46Dynll230420.2670.3042Yes
47Abl131040.2630.3082Yes
48Cep25031340.2620.3137Yes
49Nin32170.2560.3164Yes
50Sptbn132920.2520.3195Yes
51Ttk33080.2510.3254Yes
52Palld33560.2470.3296Yes
53Prex134110.2440.3334Yes
54Plk135280.2360.3339Yes
55Arhgef235410.2350.3396Yes
56Pcm137690.2250.3341Yes
57Ect237730.2250.3400Yes
58Bub139210.2180.3384Yes
59Notch240090.2160.3398Yes
60Ophn143740.2000.3268Yes
61Cep7244750.1960.3270Yes
62Lrpprc45310.1930.3294Yes
63Dock246590.1870.3280Yes
64Katna146610.1870.3329Yes
65Pcnt47480.1830.3335Yes
66Racgap147600.1830.3378Yes
67Kif1547610.1830.3427Yes
68Cenpf47880.1820.3463Yes
69Tiam148080.1810.3501Yes
70Kif449100.1760.3497Yes
71Flna49230.1750.3538Yes
72Kif5b49960.1720.3548Yes
73Pxn50700.1690.3556Yes
74Cep5752310.1610.3519Yes
75Arfgef152330.1610.3561Yes
76Pif155490.1490.3442Yes
77Wasl55600.1480.3477Yes
78Arhgef1156300.1450.3481Yes
79Cdc42bpa56970.1420.3486Yes
80Kif1157020.1420.3521Yes
81Rasa257090.1410.3556Yes
82Tlk158440.1340.3525Yes
83Sorbs258650.1340.3550Yes
84Abi158720.1330.3583Yes
85Hook358860.1330.3612Yes
86Smc1a59420.1310.3619Yes
87Ywhae60110.1280.3619Yes
88Net160130.1280.3653Yes
89Csnk1d60650.1260.3661Yes
90Clasp161590.1230.3647Yes
91Arhgef1261960.1210.3661Yes
92Nck262320.1200.3675Yes
93Epb41l262900.1180.3678Yes
94Tpx263420.1150.3683Yes
95Kif20b63640.1140.3703Yes
96Arl8a63820.1130.3725Yes
97Prc164320.1110.3730Yes
98Pdlim565990.1050.3674No
99Dlg166050.1050.3700No
100Tubgcp268060.0970.3625No
101Rhot268180.0960.3645No
102Espl168700.0950.3644No
103Actn470340.0890.3586No
104Tubgcp370370.0890.3609No
105Cyth273990.0770.3447No
106Tsc175840.0700.3373No
107Shroom278600.0590.3250No
108Dlgap579710.0540.3210No
109Pafah1b179810.0540.3219No
110Myo9b80730.0510.3187No
111Arf680810.0510.3197No
112Arhgap481740.0470.3164No
113Rapgef681890.0470.3169No
114Dst83020.0420.3124No
115Nck183080.0420.3133No
116Mapre183290.0410.3133No
117Taok284970.0350.3058No
118Arhgef785880.0310.3021No
119Cttn86380.0300.3005No
120Hdac688540.0230.2902No
121Ndc8088940.0210.2888No
122Uxt90170.0170.2831No
123Lats190280.0160.2830No
124Vcl90920.0140.2802No
125Map3k1191360.0130.2784No
126Sac3d191390.0130.2787No
127Bcl2l1192560.0080.2730No
128Trio92830.0070.2719No
129Septin992850.0070.2721No
130Mark493300.0060.2700No
131Aurka93320.0060.2701No
132Arhgdia94490.0010.2643No
133Wasf19572-0.0010.2581No
134Brca29643-0.0030.2547No
135Alms19714-0.0060.2513No
136Nedd99924-0.0130.2411No
137Capzb9944-0.0130.2405No
138Sass610067-0.0170.2348No
139Sos110166-0.0210.2304No
140Apc10181-0.0210.2303No
141Rfc110378-0.0280.2212No
142Itsn110448-0.0310.2185No
143Rock110497-0.0320.2170No
144Cdc2710774-0.0430.2042No
145Wasf210776-0.0430.2053No
146Akap1310826-0.0450.2040No
147Atg4b10966-0.0500.1983No
148Fbxo510987-0.0500.1987No
149Cep13111070-0.0530.1960No
150Llgl111246-0.0590.1887No
151Epb4111278-0.0600.1888No
152Rictor11324-0.0620.1881No
153Tubgcp511745-0.0770.1690No
154Rab3gap111933-0.0840.1618No
155Katnb111945-0.0850.1636No
156Cenpj12048-0.0890.1608No
157Smc412123-0.0910.1595No
158Rabgap112390-0.1020.1488No
159Cdc4212418-0.1030.1502No
160Pcgf513068-0.1270.1209No
161Dock413182-0.1310.1187No
162Arhgap1013408-0.1400.1111No
163Cdc42ep413627-0.1470.1040No
164Gemin413683-0.1500.1053No
165Ralbp113735-0.1520.1067No
166Mid1ip113778-0.1540.1087No
167Ezr13782-0.1540.1127No
168Gsn13792-0.1540.1164No
169Map1s13811-0.1550.1196No
170Nf113826-0.1560.1231No
171Clip214168-0.1700.1104No
172Ccnb214201-0.1720.1134No
173Clip114283-0.1740.1140No
174Kifap314632-0.1880.1014No
175Rasal214678-0.1900.1043No
176Arhgef314758-0.1940.1054No
177Kif3b14765-0.1940.1103No
178Tbcd15218-0.2170.0934No
179Ccdc88a15342-0.2230.0931No
180Ssh215361-0.2240.0982No
181Arhgap2715704-0.2390.0874No
182Cd2ap15717-0.2400.0932No
183Myh1016094-0.2580.0811No
184Shroom116383-0.2750.0739No
185Flnb16403-0.2770.0804No
186Als216581-0.2870.0791No
187Stk38l16734-0.2940.0793No
188Rapgef517075-0.3140.0706No
189Pkd217175-0.3200.0742No
190Arhgap2917397-0.3340.0720No
191Marcks17583-0.3460.0719No
192Nusap117844-0.3660.0685No
193Tuba4a19047-0.4940.0211No
194Plekhg219158-0.5110.0292No
195Rhof19314-0.5410.0359No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_MITOTIC_SPINDLE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_MITOTIC_SPINDLE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_MITOTIC_SPINDLE