| Dataset | GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos |
| Phenotype | GMP.neu_Pheno.cls#Group1_versus_Group3_repos |
| Upregulated in class | 2 |
| GeneSet | HALLMARK_IL2_STAT5_SIGNALING |
| Enrichment Score (ES) | -0.24168912 |
| Normalized Enrichment Score (NES) | -0.97965896 |
| Nominal p-value | 0.486166 |
| FDR q-value | 0.7937775 |
| FWER p-Value | 0.991 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Il18r1 | 97 | 0.828 | 0.0129 | No |
| 2 | Ikzf4 | 115 | 0.818 | 0.0297 | No |
| 3 | Ccne1 | 181 | 0.744 | 0.0424 | No |
| 4 | Rragd | 221 | 0.713 | 0.0558 | No |
| 5 | Ahcyl | 332 | 0.642 | 0.0641 | No |
| 6 | Cdkn1c | 336 | 0.640 | 0.0777 | No |
| 7 | Pdcd2l | 684 | 0.526 | 0.0716 | No |
| 8 | Spp1 | 757 | 0.511 | 0.0790 | No |
| 9 | Sh3bgrl2 | 816 | 0.498 | 0.0868 | No |
| 10 | Cxcl10 | 871 | 0.484 | 0.0944 | No |
| 11 | Serpinc1 | 938 | 0.471 | 0.1012 | No |
| 12 | Nt5e | 1144 | 0.442 | 0.1004 | No |
| 13 | Fgl2 | 1183 | 0.435 | 0.1079 | No |
| 14 | Arl4a | 1351 | 0.415 | 0.1084 | No |
| 15 | Odc1 | 1427 | 0.404 | 0.1133 | No |
| 16 | Flt3l | 1502 | 0.396 | 0.1181 | No |
| 17 | Plagl1 | 1776 | 0.365 | 0.1122 | No |
| 18 | Rora | 1789 | 0.364 | 0.1194 | No |
| 19 | Ccr4 | 1848 | 0.358 | 0.1242 | No |
| 20 | Il2ra | 1879 | 0.355 | 0.1304 | No |
| 21 | Ltb | 2071 | 0.340 | 0.1281 | No |
| 22 | F2rl2 | 2294 | 0.324 | 0.1238 | No |
| 23 | Il10 | 2358 | 0.318 | 0.1275 | No |
| 24 | Tnfrsf1b | 2387 | 0.315 | 0.1329 | No |
| 25 | Umps | 2524 | 0.303 | 0.1326 | No |
| 26 | Maff | 2637 | 0.294 | 0.1333 | No |
| 27 | Dhrs3 | 2673 | 0.291 | 0.1378 | No |
| 28 | Myo1e | 2712 | 0.288 | 0.1420 | No |
| 29 | Praf2 | 2770 | 0.284 | 0.1453 | No |
| 30 | Il1rl1 | 3015 | 0.268 | 0.1387 | No |
| 31 | Dennd5a | 3091 | 0.264 | 0.1406 | No |
| 32 | Igf2r | 3142 | 0.262 | 0.1438 | No |
| 33 | Cd79b | 3265 | 0.254 | 0.1431 | No |
| 34 | Nrp1 | 3393 | 0.245 | 0.1419 | No |
| 35 | Snx14 | 3483 | 0.239 | 0.1426 | No |
| 36 | Icos | 3531 | 0.236 | 0.1453 | No |
| 37 | Eno3 | 3642 | 0.232 | 0.1448 | No |
| 38 | Ncoa3 | 4205 | 0.208 | 0.1209 | No |
| 39 | Pim1 | 4256 | 0.205 | 0.1228 | No |
| 40 | Uck2 | 4390 | 0.199 | 0.1204 | No |
| 41 | Tiam1 | 4808 | 0.181 | 0.1033 | No |
| 42 | Pus1 | 5061 | 0.170 | 0.0943 | No |
| 43 | Gucy1b1 | 5090 | 0.168 | 0.0965 | No |
| 44 | Gpx4 | 5307 | 0.158 | 0.0890 | No |
| 45 | Nop2 | 5314 | 0.157 | 0.0921 | No |
| 46 | Adam19 | 5384 | 0.154 | 0.0919 | No |
| 47 | Cd86 | 5584 | 0.147 | 0.0850 | No |
| 48 | Tgm2 | 5593 | 0.147 | 0.0878 | No |
| 49 | Gbp3 | 5641 | 0.145 | 0.0885 | No |
| 50 | Hycc2 | 5769 | 0.138 | 0.0851 | No |
| 51 | Huwe1 | 6126 | 0.124 | 0.0698 | No |
| 52 | Il1r2 | 6230 | 0.120 | 0.0672 | No |
| 53 | Twsg1 | 6346 | 0.115 | 0.0639 | No |
| 54 | Klf6 | 6380 | 0.113 | 0.0647 | No |
| 55 | Nfkbiz | 6626 | 0.104 | 0.0545 | No |
| 56 | Tnfsf11 | 6638 | 0.103 | 0.0562 | No |
| 57 | Itgav | 6700 | 0.101 | 0.0553 | No |
| 58 | Cdc6 | 6805 | 0.097 | 0.0522 | No |
| 59 | P4ha1 | 6810 | 0.097 | 0.0540 | No |
| 60 | Cdc42se2 | 6887 | 0.094 | 0.0522 | No |
| 61 | Csf1 | 6957 | 0.092 | 0.0508 | No |
| 62 | Pth1r | 6999 | 0.090 | 0.0506 | No |
| 63 | Hk2 | 7238 | 0.081 | 0.0404 | No |
| 64 | Lclat1 | 7545 | 0.072 | 0.0265 | No |
| 65 | Cd44 | 7604 | 0.069 | 0.0251 | No |
| 66 | Cish | 7618 | 0.069 | 0.0259 | No |
| 67 | Tnfrsf9 | 7657 | 0.068 | 0.0254 | No |
| 68 | Ifitm3 | 7707 | 0.065 | 0.0244 | No |
| 69 | Bhlhe40 | 7721 | 0.065 | 0.0251 | No |
| 70 | Swap70 | 7810 | 0.061 | 0.0220 | No |
| 71 | Plec | 8030 | 0.053 | 0.0121 | No |
| 72 | S100a1 | 8091 | 0.051 | 0.0102 | No |
| 73 | Eef1akmt1 | 8191 | 0.047 | 0.0062 | No |
| 74 | Ncs1 | 8217 | 0.045 | 0.0059 | No |
| 75 | Ahr | 8290 | 0.042 | 0.0032 | No |
| 76 | Phtf2 | 8548 | 0.033 | -0.0091 | No |
| 77 | Spred2 | 8558 | 0.033 | -0.0088 | No |
| 78 | Galm | 8577 | 0.032 | -0.0090 | No |
| 79 | Plpp1 | 8862 | 0.022 | -0.0229 | No |
| 80 | Alcam | 8881 | 0.021 | -0.0233 | No |
| 81 | Plscr1 | 9105 | 0.014 | -0.0343 | No |
| 82 | Mapkapk2 | 9247 | 0.008 | -0.0412 | No |
| 83 | Tnfrsf21 | 9255 | 0.008 | -0.0414 | No |
| 84 | Capg | 9448 | 0.001 | -0.0510 | No |
| 85 | Itgae | 9862 | -0.010 | -0.0716 | No |
| 86 | Cyfip1 | 10056 | -0.017 | -0.0810 | No |
| 87 | Slc2a3 | 10057 | -0.017 | -0.0806 | No |
| 88 | Muc1 | 10460 | -0.031 | -0.1002 | No |
| 89 | Rabgap1l | 10668 | -0.039 | -0.1098 | No |
| 90 | Prnp | 10673 | -0.039 | -0.1091 | No |
| 91 | Igf1r | 10744 | -0.042 | -0.1118 | No |
| 92 | Snx9 | 10785 | -0.043 | -0.1129 | No |
| 93 | Gabarapl1 | 10808 | -0.044 | -0.1130 | No |
| 94 | Dcps | 10862 | -0.046 | -0.1147 | No |
| 95 | Irf4 | 11019 | -0.052 | -0.1215 | No |
| 96 | Slc39a8 | 11081 | -0.054 | -0.1234 | No |
| 97 | Lrrc8c | 11085 | -0.054 | -0.1224 | No |
| 98 | Ctla4 | 11290 | -0.060 | -0.1313 | No |
| 99 | Rhob | 11296 | -0.061 | -0.1303 | No |
| 100 | Abcb1a | 11444 | -0.065 | -0.1363 | No |
| 101 | Phlda1 | 11887 | -0.083 | -0.1568 | No |
| 102 | Lrig1 | 12357 | -0.100 | -0.1782 | No |
| 103 | Itga6 | 12376 | -0.101 | -0.1770 | No |
| 104 | Pou2f1 | 12469 | -0.105 | -0.1793 | No |
| 105 | Map6 | 12645 | -0.112 | -0.1857 | No |
| 106 | Pnp | 12915 | -0.121 | -0.1967 | No |
| 107 | Hopx | 12940 | -0.121 | -0.1953 | No |
| 108 | Itih5 | 13119 | -0.129 | -0.2015 | No |
| 109 | Ndrg1 | 13369 | -0.138 | -0.2111 | No |
| 110 | Ttc39b | 13459 | -0.142 | -0.2125 | No |
| 111 | Mxd1 | 13460 | -0.142 | -0.2095 | No |
| 112 | Ahnak | 13517 | -0.144 | -0.2092 | No |
| 113 | Plin2 | 13541 | -0.144 | -0.2073 | No |
| 114 | Wls | 13610 | -0.147 | -0.2075 | No |
| 115 | Socs2 | 13617 | -0.147 | -0.2047 | No |
| 116 | Irf8 | 13703 | -0.150 | -0.2057 | No |
| 117 | Bmpr2 | 13878 | -0.158 | -0.2111 | No |
| 118 | Hipk2 | 13931 | -0.160 | -0.2102 | No |
| 119 | Tlr7 | 13954 | -0.161 | -0.2079 | No |
| 120 | St3gal4 | 14167 | -0.170 | -0.2149 | No |
| 121 | Spry4 | 14279 | -0.174 | -0.2168 | No |
| 122 | Il10ra | 14391 | -0.179 | -0.2185 | No |
| 123 | Rhoh | 14484 | -0.183 | -0.2192 | No |
| 124 | Xbp1 | 14574 | -0.185 | -0.2197 | No |
| 125 | Il3ra | 14642 | -0.188 | -0.2190 | No |
| 126 | Ccnd3 | 14901 | -0.201 | -0.2277 | No |
| 127 | Bcl2 | 15029 | -0.207 | -0.2296 | No |
| 128 | Tnfsf10 | 15269 | -0.220 | -0.2370 | Yes |
| 129 | Ager | 15279 | -0.220 | -0.2327 | Yes |
| 130 | Etfbkmt | 15366 | -0.225 | -0.2322 | Yes |
| 131 | Cdcp1 | 15440 | -0.228 | -0.2309 | Yes |
| 132 | Ikzf2 | 15574 | -0.233 | -0.2326 | Yes |
| 133 | Selp | 15621 | -0.236 | -0.2299 | Yes |
| 134 | Prkch | 15750 | -0.242 | -0.2311 | Yes |
| 135 | Tnfrsf4 | 15852 | -0.247 | -0.2309 | Yes |
| 136 | Myo1c | 15892 | -0.249 | -0.2275 | Yes |
| 137 | Il4ra | 16029 | -0.255 | -0.2288 | Yes |
| 138 | Socs1 | 16103 | -0.259 | -0.2269 | Yes |
| 139 | P2rx4 | 16142 | -0.261 | -0.2232 | Yes |
| 140 | Ifngr1 | 16159 | -0.262 | -0.2184 | Yes |
| 141 | Ptch1 | 16265 | -0.267 | -0.2179 | Yes |
| 142 | Map3k8 | 16325 | -0.271 | -0.2151 | Yes |
| 143 | Ptger2 | 16378 | -0.275 | -0.2118 | Yes |
| 144 | Nfil3 | 16455 | -0.280 | -0.2096 | Yes |
| 145 | Tnfrsf8 | 16525 | -0.284 | -0.2070 | Yes |
| 146 | Traf1 | 16530 | -0.284 | -0.2010 | Yes |
| 147 | Slc1a5 | 16558 | -0.286 | -0.1963 | Yes |
| 148 | Gadd45b | 16622 | -0.290 | -0.1932 | Yes |
| 149 | Ptrh2 | 16785 | -0.299 | -0.1949 | Yes |
| 150 | Sell | 16875 | -0.304 | -0.1929 | Yes |
| 151 | Scn9a | 16899 | -0.305 | -0.1875 | Yes |
| 152 | Ccnd2 | 16936 | -0.307 | -0.1827 | Yes |
| 153 | Fah | 17074 | -0.314 | -0.1828 | Yes |
| 154 | Furin | 17106 | -0.317 | -0.1776 | Yes |
| 155 | Smpdl3a | 17117 | -0.317 | -0.1712 | Yes |
| 156 | Gata1 | 17484 | -0.340 | -0.1824 | Yes |
| 157 | She | 17839 | -0.365 | -0.1923 | Yes |
| 158 | Batf | 17856 | -0.367 | -0.1853 | Yes |
| 159 | Rgs16 | 17858 | -0.367 | -0.1774 | Yes |
| 160 | Drc1 | 17902 | -0.371 | -0.1716 | Yes |
| 161 | Capn3 | 17979 | -0.377 | -0.1673 | Yes |
| 162 | Ctsz | 18066 | -0.384 | -0.1634 | Yes |
| 163 | Glipr2 | 18077 | -0.386 | -0.1556 | Yes |
| 164 | Etv4 | 18102 | -0.388 | -0.1484 | Yes |
| 165 | Slc29a2 | 18195 | -0.397 | -0.1445 | Yes |
| 166 | Cd81 | 18276 | -0.406 | -0.1398 | Yes |
| 167 | Enpp1 | 18313 | -0.409 | -0.1328 | Yes |
| 168 | Syngr2 | 18476 | -0.426 | -0.1318 | Yes |
| 169 | Casp3 | 18669 | -0.447 | -0.1319 | Yes |
| 170 | Rnh1 | 18821 | -0.464 | -0.1295 | Yes |
| 171 | Ckap4 | 18944 | -0.480 | -0.1253 | Yes |
| 172 | Cst7 | 18977 | -0.485 | -0.1165 | Yes |
| 173 | Myc | 19254 | -0.530 | -0.1190 | Yes |
| 174 | Anxa4 | 19300 | -0.539 | -0.1097 | Yes |
| 175 | Serpinb6a | 19332 | -0.545 | -0.0995 | Yes |
| 176 | Bcl2l1 | 19480 | -0.578 | -0.0945 | Yes |
| 177 | Cd48 | 19501 | -0.583 | -0.0829 | Yes |
| 178 | Amacr | 19529 | -0.590 | -0.0716 | Yes |
| 179 | Tnfrsf18 | 19537 | -0.592 | -0.0592 | Yes |
| 180 | Gpr65 | 19730 | -0.655 | -0.0548 | Yes |
| 181 | Car2 | 19850 | -0.731 | -0.0450 | Yes |
| 182 | Gsto1 | 19885 | -0.757 | -0.0304 | Yes |
| 183 | Ecm1 | 19960 | -0.867 | -0.0155 | Yes |
| 184 | Syt11 | 19965 | -0.873 | 0.0031 | Yes |

