Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.23640132
Normalized Enrichment Score (NES)	-1.1438941
Nominal p-value	0.19881889
FDR q-value	0.73601234
FWER p-Value	0.939

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Rragd	221	0.713	0.0062	No
2	Tgfa	307	0.656	0.0179	No
3	Aldh7a1	335	0.640	0.0321	No
4	Egfr	460	0.588	0.0402	No
5	Col5a1	656	0.536	0.0434	No
6	Chst1	817	0.498	0.0474	No
7	Gpr87	921	0.475	0.0538	No
8	Kif20a	980	0.465	0.0622	No
9	Nt5e	1144	0.442	0.0647	No
10	Chpf	1147	0.442	0.0754	No
11	Med24	1152	0.441	0.0859	No
12	Ndst3	1168	0.439	0.0958	No
13	B4galt2	1200	0.434	0.1048	No
14	Met	1514	0.395	0.0986	No
15	Plod1	1827	0.360	0.0917	No
16	Cth	1920	0.353	0.0956	No
17	Pygl	2198	0.330	0.0897	No
18	Slc25a10	2459	0.309	0.0841	No
19	Gal3st1	2567	0.299	0.0860	No
20	Ero1a	2662	0.292	0.0884	No
21	Cdk1	2947	0.273	0.0807	No
22	Pgk1	3376	0.246	0.0651	No
23	Psmc4	3460	0.240	0.0668	No
24	Pkp2	3547	0.235	0.0681	No
25	Sdc2	3594	0.233	0.0715	No
26	G6pdx	3838	0.221	0.0647	No
27	Tpi1	3874	0.221	0.0683	No
28	Cog2	3924	0.218	0.0711	No
29	Gpc4	4087	0.213	0.0681	No
30	Arpp19	4151	0.211	0.0701	No
31	Ak4	4225	0.207	0.0715	No
32	Nasp	4231	0.207	0.0762	No
33	Tgfbi	4300	0.203	0.0778	No
34	Hdlbp	4328	0.202	0.0813	No
35	Ppp2cb	4333	0.202	0.0860	No
36	Sap30	4393	0.199	0.0879	No
37	Dld	4480	0.196	0.0883	No
38	Ak3	4507	0.194	0.0918	No
39	Gfus	4759	0.183	0.0836	No
40	Aldh9a1	4773	0.182	0.0873	No
41	Ang	4977	0.173	0.0813	No
42	Stc2	5020	0.171	0.0834	No
43	Fbp2	5386	0.154	0.0687	No
44	Pfkfb1	5461	0.152	0.0687	No
45	Fkbp4	5483	0.151	0.0713	No
46	Bpnt1	5644	0.145	0.0668	No
47	Hmmr	5782	0.137	0.0632	No
48	Hax1	5801	0.136	0.0656	No
49	Hs2st1	5862	0.134	0.0658	No
50	Kif2a	5917	0.132	0.0663	No
51	Hspa5	6147	0.123	0.0578	No
52	Slc25a13	6436	0.111	0.0460	No
53	Fam162a	6602	0.105	0.0402	No
54	Slc35a3	6606	0.105	0.0426	No
55	Copb2	6740	0.099	0.0383	No
56	P4ha1	6810	0.097	0.0372	No
57	Pfkp	6841	0.096	0.0380	No
58	Abcb6	6902	0.094	0.0373	No
59	Paxip1	6960	0.092	0.0367	No
60	Hk2	7238	0.081	0.0247	No
61	Bik	7246	0.081	0.0263	No
62	Pgm2	7437	0.075	0.0185	No
63	Got1	7552	0.071	0.0145	No
64	Cd44	7604	0.069	0.0136	No
65	Alg1	7767	0.063	0.0070	No
66	Gfpt1	7991	0.054	-0.0029	No
67	Pgam1	8047	0.052	-0.0044	No
68	Mpi	8227	0.045	-0.0123	No
69	Phka2	8335	0.040	-0.0167	No
70	Cyb5a	8430	0.037	-0.0206	No
71	Irs2	8464	0.036	-0.0214	No
72	B4galt7	8522	0.034	-0.0234	No
73	Homer1	8636	0.030	-0.0284	No
74	B4galt1	8644	0.030	-0.0280	No
75	Zfp292	8672	0.029	-0.0287	No
76	Pgls	8940	0.019	-0.0417	No
77	Pygb	9263	0.008	-0.0577	No
78	Aurka	9332	0.006	-0.0610	No
79	Ugp2	9417	0.002	-0.0652	No
80	Lhpp	9456	0.001	-0.0671	No
81	Gmppa	9622	-0.003	-0.0753	No
82	Aldoa	9818	-0.009	-0.0849	No
83	Vegfa	9948	-0.013	-0.0911	No
84	Gpc1	10198	-0.022	-0.1031	No
85	Qsox1	10293	-0.025	-0.1072	No
86	Capn5	10357	-0.027	-0.1097	No
87	Gne	10452	-0.031	-0.1137	No
88	Ext2	10467	-0.031	-0.1137	No
89	Isg20	10677	-0.039	-0.1232	No
90	Depdc1a	10792	-0.044	-0.1279	No
91	Rbck1	10841	-0.045	-0.1292	No
92	Me1	11261	-0.059	-0.1489	No
93	Xylt2	11468	-0.066	-0.1576	No
94	Pmm2	11515	-0.068	-0.1583	No
95	Pkm	11602	-0.071	-0.1609	No
96	Sdhc	11700	-0.075	-0.1640	No
97	Agl	11703	-0.075	-0.1622	No
98	Ppia	11916	-0.084	-0.1709	No
99	Idh1	11935	-0.085	-0.1697	No
100	Txn1	12148	-0.092	-0.1782	No
101	Ankzf1	12285	-0.098	-0.1826	No
102	Me2	12329	-0.099	-0.1824	No
103	Prps1	12366	-0.101	-0.1818	No
104	Mdh1	12582	-0.110	-0.1899	No
105	Cacna1h	12811	-0.119	-0.1985	No
106	Eno2	12908	-0.121	-0.2004	No
107	Glrx	13023	-0.124	-0.2031	No
108	Mxi1	13178	-0.131	-0.2077	No
109	Gpc3	13339	-0.137	-0.2124	No
110	Pdk3	13426	-0.140	-0.2133	No
111	B3gat3	13432	-0.140	-0.2102	No
112	Rpe	13468	-0.142	-0.2085	No
113	Slc16a3	13615	-0.147	-0.2123	No
114	Ext1	13651	-0.148	-0.2104	No
115	Got2	13773	-0.153	-0.2128	No
116	Cenpa	13798	-0.155	-0.2102	No
117	Mdh2	13892	-0.159	-0.2111	No
118	Glce	13976	-0.162	-0.2113	No
119	Gnpda1	14069	-0.166	-0.2119	No
120	Dcn	14185	-0.171	-0.2135	No
121	Pam	14380	-0.179	-0.2190	No
122	B3galt6	14393	-0.179	-0.2152	No
123	Galk2	14408	-0.180	-0.2115	No
124	Pgam2	14468	-0.182	-0.2101	No
125	Idua	14634	-0.188	-0.2138	No
126	Cxcr4	14680	-0.190	-0.2115	No
127	Gclc	14727	-0.193	-0.2091	No
128	Pcx	14916	-0.202	-0.2137	No
129	Gapdhs	14949	-0.203	-0.2103	No
130	Chst12	15117	-0.212	-0.2136	No
131	Gusb	15274	-0.220	-0.2161	No
132	Mertk	15466	-0.229	-0.2202	No
133	Akr1a1	15547	-0.232	-0.2185	No
134	Sod1	15622	-0.236	-0.2165	No
135	Plod2	15689	-0.238	-0.2141	No
136	Angptl4	15998	-0.253	-0.2234	No
137	Mif	16240	-0.266	-0.2291	No
138	Galk1	16264	-0.267	-0.2238	No
139	Hs6st2	16516	-0.283	-0.2295	Yes
140	Kdelr3	16521	-0.283	-0.2228	Yes
141	Lhx9	16680	-0.292	-0.2237	Yes
142	Tpst1	16723	-0.294	-0.2186	Yes
143	Adora2b	16725	-0.294	-0.2115	Yes
144	Fut8	16792	-0.299	-0.2076	Yes
145	Agrn	16797	-0.299	-0.2005	Yes
146	Slc37a4	16887	-0.305	-0.1976	Yes
147	Lct	17086	-0.315	-0.1999	Yes
148	Ddit4	17332	-0.330	-0.2042	Yes
149	Eno1b	17418	-0.335	-0.2003	Yes
150	Chpf2	17527	-0.343	-0.1974	Yes
151	Egln3	17529	-0.343	-0.1891	Yes
152	Gmppb	17603	-0.347	-0.1844	Yes
153	B3gnt3	17606	-0.347	-0.1760	Yes
154	Il13ra1	17881	-0.369	-0.1809	Yes
155	Ndufv3	17908	-0.372	-0.1731	Yes
156	Sdc1	17969	-0.377	-0.1670	Yes
157	Casp6	18086	-0.387	-0.1634	Yes
158	Polr3k	18099	-0.388	-0.1546	Yes
159	Srd5a3	18158	-0.393	-0.1479	Yes
160	Vldlr	18247	-0.402	-0.1426	Yes
161	Gys1	18256	-0.403	-0.1332	Yes
162	Sdc3	18458	-0.425	-0.1330	Yes
163	Ldha	18560	-0.433	-0.1275	Yes
164	Taldo1	18617	-0.440	-0.1197	Yes
165	Vcan	18639	-0.442	-0.1100	Yes
166	Ldhc	19017	-0.490	-0.1170	Yes
167	Ecd	19037	-0.492	-0.1060	Yes
168	Cited2	19197	-0.519	-0.1014	Yes
169	Spag4	19358	-0.550	-0.0961	Yes
170	Ier3	19366	-0.551	-0.0830	Yes
171	Gale	19395	-0.557	-0.0709	Yes
172	B4galt4	19510	-0.585	-0.0624	Yes
173	Nsdhl	19566	-0.600	-0.0506	Yes
174	Cln6	19629	-0.620	-0.0386	Yes
175	Stmn1	19648	-0.627	-0.0243	Yes
176	Ppfia4	19898	-0.770	-0.0181	Yes
177	Nanp	20003	-1.007	0.0012	Yes