Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.2504003
Normalized Enrichment Score (NES)	-1.2208092
Nominal p-value	0.18982388
FDR q-value	0.95349085
FWER p-Value	0.884

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Pde6g	6	1.324	0.0419	No
2	Rad52	1151	0.441	-0.0016	No
3	Tarbp2	1483	0.397	-0.0056	No
4	Ddb1	1575	0.388	0.0021	No
5	Cmpk2	1767	0.367	0.0042	No
6	Snapc4	1784	0.364	0.0150	No
7	Polr2g	2035	0.342	0.0133	No
8	Srsf6	2210	0.330	0.0151	No
9	Umps	2524	0.303	0.0090	No
10	Usp11	2579	0.299	0.0158	No
11	Rad51	2636	0.294	0.0224	No
12	Cetn2	2711	0.288	0.0278	No
13	Bcap31	2907	0.275	0.0268	No
14	Polr1c	2985	0.270	0.0315	No
15	Vps37b	3004	0.268	0.0391	No
16	Polh	3094	0.264	0.0431	No
17	Ercc3	3171	0.259	0.0475	No
18	Adcy6	3223	0.256	0.0531	No
19	Ddb2	3457	0.240	0.0490	No
20	Supt5	3670	0.231	0.0457	No
21	Zwint	3705	0.228	0.0513	No
22	Smad5	3720	0.228	0.0578	No
23	Dut	3791	0.224	0.0614	No
24	Polr2k	4099	0.213	0.0528	No
25	Polr2a	4217	0.208	0.0535	No
26	Taf13	4379	0.200	0.0518	No
27	Ercc4	4472	0.196	0.0534	No
28	Ak3	4507	0.194	0.0578	No
29	Cstf3	4690	0.185	0.0546	No
30	Ercc5	5292	0.159	0.0294	No
31	Gpx4	5307	0.158	0.0337	No
32	Nelfcd	5559	0.148	0.0258	No
33	Rpa3	5590	0.147	0.0290	No
34	Pom121	5771	0.138	0.0243	No
35	Sdcbp	5868	0.133	0.0238	No
36	Rev3l	5883	0.133	0.0273	No
37	Nudt21	5898	0.132	0.0308	No
38	Rrm2b	6197	0.121	0.0197	No
39	Lig1	6479	0.109	0.0090	No
40	Pold3	6505	0.109	0.0112	No
41	Gtf2f1	6552	0.107	0.0123	No
42	Nt5c	6576	0.106	0.0145	No
43	Gmpr2	6682	0.102	0.0125	No
44	Adrm1	6940	0.093	0.0025	No
45	Nme3	6995	0.090	0.0027	No
46	Gtf2h1	7108	0.086	-0.0002	No
47	Hcls1	7190	0.082	-0.0017	No
48	Taf6	7218	0.081	-0.0004	No
49	Nelfe	7451	0.075	-0.0097	No
50	Rnmt	7510	0.072	-0.0103	No
51	Stx3	7538	0.072	-0.0094	No
52	Taf10	7655	0.068	-0.0131	No
53	Ada	7874	0.059	-0.0222	No
54	Rfc4	7901	0.058	-0.0216	No
55	Sf3a3	7919	0.057	-0.0207	No
56	Polr2j	7943	0.056	-0.0201	No
57	Ell	8078	0.051	-0.0252	No
58	Dgcr8	8092	0.051	-0.0242	No
59	Eloa	8327	0.041	-0.0347	No
60	Brf2	8409	0.038	-0.0376	No
61	Rpa2	8455	0.036	-0.0387	No
62	Pola1	8526	0.034	-0.0411	No
63	Cox17	8681	0.028	-0.0480	No
64	Sac3d1	9139	0.013	-0.0705	No
65	Nfx1	9172	0.012	-0.0718	No
66	Ssrp1	9206	0.010	-0.0731	No
67	Alyref	9278	0.008	-0.0764	No
68	Polb	9599	-0.002	-0.0925	No
69	Pola2	9881	-0.011	-0.1063	No
70	Rfc5	9930	-0.013	-0.1083	No
71	Cda	9940	-0.013	-0.1083	No
72	Ercc2	10070	-0.017	-0.1142	No
73	Guk1	10073	-0.017	-0.1138	No
74	Fen1	10208	-0.022	-0.1198	No
75	Mpc2	10272	-0.025	-0.1222	No
76	Pcna	10657	-0.039	-0.1403	No
77	Tyms	10702	-0.040	-0.1412	No
78	Pold1	10999	-0.051	-0.1545	No
79	Upf3b	11181	-0.057	-0.1618	No
80	Ccno	11634	-0.073	-0.1822	No
81	Pold4	11737	-0.077	-0.1849	No
82	Rbx1	12442	-0.104	-0.2170	No
83	Nt5c3	12466	-0.105	-0.2148	No
84	Trp53	12517	-0.107	-0.2139	No
85	Polr2f	12566	-0.109	-0.2128	No
86	Rfc3	12634	-0.112	-0.2126	No
87	Gtf2a2	12713	-0.116	-0.2129	No
88	Zfp707	12743	-0.117	-0.2106	No
89	Rala	12888	-0.120	-0.2140	No
90	Pnp	12915	-0.121	-0.2115	No
91	Mpg	12918	-0.121	-0.2077	No
92	Polr2d	13200	-0.132	-0.2177	No
93	Taf12	13561	-0.145	-0.2312	No
94	Sec61a1	13577	-0.146	-0.2273	No
95	Ercc8	13781	-0.154	-0.2326	No
96	Polr3gl	13844	-0.156	-0.2307	No
97	Nudt9	13971	-0.162	-0.2319	No
98	Dad1	14149	-0.170	-0.2354	No
99	Prim1	14207	-0.172	-0.2328	No
100	Gtf2b	14558	-0.185	-0.2445	Yes
101	Taf9	14561	-0.185	-0.2387	Yes
102	Polr2i	14675	-0.190	-0.2383	Yes
103	Vps28	14697	-0.191	-0.2333	Yes
104	Tsg101	14840	-0.198	-0.2342	Yes
105	Rae1	14939	-0.203	-0.2326	Yes
106	Itpa	14996	-0.205	-0.2289	Yes
107	Polr3c	15181	-0.215	-0.2313	Yes
108	Rfc2	15239	-0.218	-0.2272	Yes
109	Polr1d	15297	-0.221	-0.2231	Yes
110	Xpc	15645	-0.237	-0.2330	Yes
111	Edf1	15739	-0.241	-0.2300	Yes
112	Npr2	16010	-0.254	-0.2355	Yes
113	Snapc5	16128	-0.260	-0.2331	Yes
114	Polr1h	16346	-0.273	-0.2353	Yes
115	Mrpl40	16358	-0.274	-0.2271	Yes
116	Aaas	16432	-0.279	-0.2219	Yes
117	Nelfb	16531	-0.284	-0.2178	Yes
118	Ak1	16604	-0.289	-0.2122	Yes
119	Taf1c	16955	-0.308	-0.2200	Yes
120	Impdh2	16958	-0.308	-0.2103	Yes
121	Gtf2h3	17021	-0.311	-0.2035	Yes
122	Pde4b	17072	-0.314	-0.1960	Yes
123	Cant1	17178	-0.320	-0.1911	Yes
124	Poll	17276	-0.327	-0.1856	Yes
125	Gsdme	17395	-0.334	-0.1809	Yes
126	Pole4	17515	-0.342	-0.1760	Yes
127	Aprt	17519	-0.342	-0.1652	Yes
128	Surf1	17666	-0.352	-0.1614	Yes
129	Nme1	17932	-0.374	-0.1628	Yes
130	Gtf3c5	17940	-0.374	-0.1512	Yes
131	Ago4	18036	-0.382	-0.1438	Yes
132	Ercc1	18252	-0.403	-0.1418	Yes
133	Polr2c	18473	-0.426	-0.1393	Yes
134	Dctn4	18475	-0.426	-0.1258	Yes
135	Polr2e	18579	-0.435	-0.1172	Yes
136	Tk2	18796	-0.461	-0.1133	Yes
137	Dguok	18968	-0.484	-0.1065	Yes
138	Supt4a	18997	-0.488	-0.0924	Yes
139	Gtf2h5	19159	-0.511	-0.0842	Yes
140	Ncbp2	19511	-0.585	-0.0833	Yes
141	Arl6ip1	19571	-0.601	-0.0671	Yes
142	Polr2h	19639	-0.624	-0.0506	Yes
143	Clp1	19672	-0.635	-0.0319	Yes
144	Nme4	19893	-0.766	-0.0186	Yes
145	Eif1b	19918	-0.793	0.0054	Yes