Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_COMPLEMENT
Enrichment Score (ES)	0.16361241
Normalized Enrichment Score (NES)	0.83197623
Nominal p-value	0.8912621
FDR q-value	0.89875466
FWER p-Value	0.997

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Hspa1a	117	0.814	0.0174	Yes
2	Cd36	308	0.654	0.0266	Yes
3	Gp9	800	0.501	0.0162	Yes
4	S100a13	869	0.485	0.0267	Yes
5	Mmp14	876	0.483	0.0402	Yes
6	Pcsk9	895	0.479	0.0531	Yes
7	Serpinc1	938	0.471	0.0644	Yes
8	Kcnip2	943	0.469	0.0777	Yes
9	Gp1ba	1035	0.457	0.0862	Yes
10	Cr2	1088	0.450	0.0965	Yes
11	Ctss	1198	0.434	0.1034	Yes
12	Col4a2	1526	0.394	0.0982	Yes
13	Scg3	1550	0.390	0.1082	Yes
14	Plg	1870	0.356	0.1024	Yes
15	Fn1	2073	0.339	0.1019	Yes
16	Vcpip1	2107	0.338	0.1100	Yes
17	Klkb1	2148	0.335	0.1175	Yes
18	Lap3	2187	0.331	0.1251	Yes
19	Itgam	2195	0.331	0.1342	Yes
20	Jak2	2213	0.330	0.1428	Yes
21	Sirt6	2249	0.327	0.1504	Yes
22	Tfpi2	2435	0.311	0.1500	Yes
23	Rbsn	2598	0.297	0.1504	Yes
24	Maff	2637	0.294	0.1569	Yes
25	Pik3ca	2670	0.291	0.1636	Yes
26	Pclo	2938	0.273	0.1580	No
27	Notch4	3296	0.252	0.1472	No
28	Usp14	3491	0.238	0.1443	No
29	Usp8	3648	0.232	0.1431	No
30	Raf1	3656	0.231	0.1494	No
31	Sh2b3	3688	0.229	0.1544	No
32	S100a9	3812	0.223	0.1546	No
33	Pim1	4256	0.205	0.1382	No
34	Irf1	4294	0.204	0.1421	No
35	Ppp2cb	4333	0.202	0.1460	No
36	Dyrk2	4470	0.196	0.1448	No
37	Cdh13	4643	0.187	0.1415	No
38	F3	4684	0.186	0.1448	No
39	Grb2	4722	0.184	0.1482	No
40	Usp16	4778	0.182	0.1507	No
41	Cblb	4905	0.176	0.1494	No
42	Ang	4977	0.173	0.1508	No
43	Fdx1	5318	0.157	0.1381	No
44	Gmfb	5608	0.146	0.1278	No
45	Clu	5700	0.142	0.1273	No
46	Kif2a	5917	0.132	0.1202	No
47	Plaur	6088	0.125	0.1152	No
48	Hspa5	6147	0.123	0.1158	No
49	Lcp2	6181	0.122	0.1176	No
50	Lamp2	6568	0.106	0.1013	No
51	Prep	6662	0.103	0.0995	No
52	Cp	7005	0.090	0.0849	No
53	Brpf3	7300	0.079	0.0723	No
54	Ctso	7509	0.072	0.0639	No
55	Was	7953	0.055	0.0432	No
56	Cpq	8035	0.053	0.0406	No
57	Prdm4	8200	0.046	0.0337	No
58	Plek	8712	0.028	0.0088	No
59	Lta4h	8780	0.025	0.0061	No
60	Spock2	8832	0.024	0.0042	No
61	Dusp5	9009	0.017	-0.0041	No
62	Plscr1	9105	0.014	-0.0085	No
63	Cebpb	9111	0.013	-0.0084	No
64	C3	9128	0.013	-0.0088	No
65	Rabif	9129	0.013	-0.0085	No
66	Gnai3	9297	0.007	-0.0167	No
67	Actn2	9361	0.004	-0.0197	No
68	Rnf4	9377	0.004	-0.0204	No
69	Ltf	9491	0.000	-0.0260	No
70	Lrp1	9555	-0.000	-0.0292	No
71	Cda	9940	-0.013	-0.0482	No
72	Dock10	9963	-0.014	-0.0489	No
73	Gng2	9999	-0.015	-0.0502	No
74	Dusp6	10171	-0.021	-0.0582	No
75	Gnai2	10303	-0.026	-0.0641	No
76	Ctsh	10320	-0.026	-0.0641	No
77	Adam9	10416	-0.030	-0.0680	No
78	Psen1	10526	-0.034	-0.0726	No
79	Phex	10544	-0.034	-0.0724	No
80	F8	10611	-0.036	-0.0747	No
81	Pla2g4a	10665	-0.039	-0.0763	No
82	Gata3	10931	-0.049	-0.0882	No
83	Fcnb	11091	-0.054	-0.0947	No
84	Akap10	11229	-0.059	-0.0999	No
85	Zeb1	11253	-0.059	-0.0993	No
86	Me1	11261	-0.059	-0.0980	No
87	Gpd2	11458	-0.066	-0.1060	No
88	Dpp4	11476	-0.067	-0.1049	No
89	Prcp	11668	-0.074	-0.1124	No
90	F5	11696	-0.075	-0.1116	No
91	Irf2	11826	-0.081	-0.1158	No
92	Pik3r5	11869	-0.082	-0.1156	No
93	Kcnip3	11971	-0.086	-0.1182	No
94	Calm3	11986	-0.086	-0.1164	No
95	Rce1	12310	-0.098	-0.1299	No
96	Lyn	12372	-0.101	-0.1300	No
97	Ctsl	12455	-0.105	-0.1312	No
98	Fcer1g	12463	-0.105	-0.1285	No
99	Cdk5r1	12496	-0.106	-0.1271	No
100	Prkcd	12525	-0.108	-0.1254	No
101	Csrp1	12539	-0.108	-0.1230	No
102	Lck	12684	-0.114	-0.1269	No
103	Usp15	12729	-0.116	-0.1258	No
104	Pdgfb	12808	-0.119	-0.1264	No
105	C1qc	12948	-0.122	-0.1299	No
106	Stx4a	12954	-0.122	-0.1266	No
107	Gnb4	12957	-0.122	-0.1232	No
108	Casp1	13117	-0.129	-0.1276	No
109	L3mbtl4	13145	-0.129	-0.1252	No
110	Dock9	13158	-0.130	-0.1221	No
111	Dock4	13182	-0.131	-0.1195	No
112	Ehd1	13246	-0.134	-0.1188	No
113	Gca	13322	-0.136	-0.1187	No
114	Msrb1	13604	-0.147	-0.1286	No
115	Prss36	13884	-0.158	-0.1382	No
116	Lgals3	13903	-0.159	-0.1345	No
117	Src	14253	-0.173	-0.1471	No
118	Irf7	14309	-0.175	-0.1449	No
119	Ppp4c	14382	-0.179	-0.1434	No
120	Lipa	14543	-0.184	-0.1461	No
121	Calm1	14879	-0.200	-0.1573	No
122	Cpm	14923	-0.202	-0.1537	No
123	Rasgrp1	15060	-0.208	-0.1545	No
124	Ctsd	15226	-0.217	-0.1566	No
125	Casp4	15265	-0.219	-0.1522	No
126	Ctsc	15400	-0.226	-0.1525	No
127	Anxa5	15412	-0.226	-0.1466	No
128	F10	15556	-0.232	-0.1471	No
129	Xpnpep1	15766	-0.242	-0.1507	No
130	Lgmn	15788	-0.244	-0.1448	No
131	Dgkh	15851	-0.247	-0.1408	No
132	Timp2	15903	-0.250	-0.1362	No
133	Cfh	15912	-0.250	-0.1295	No
134	Hnf4a	16342	-0.272	-0.1433	No
135	Cfb	16392	-0.276	-0.1378	No
136	Ctsb	16511	-0.283	-0.1356	No
137	Apoc1	16684	-0.292	-0.1359	No
138	F7	16778	-0.298	-0.1321	No
139	Pla2g7	16782	-0.298	-0.1237	No
140	Pik3cg	16794	-0.299	-0.1157	No
141	Casp7	17002	-0.310	-0.1172	No
142	Olr1	17024	-0.311	-0.1093	No
143	Pfn1	17343	-0.330	-0.1159	No
144	Psmb9	17360	-0.331	-0.1072	No
145	Zfpm2	17573	-0.345	-0.1080	No
146	Pdp1	17602	-0.347	-0.0995	No
147	Dgkg	18129	-0.391	-0.1147	No
148	Kynu	18310	-0.409	-0.1121	No
149	Rhog	18416	-0.420	-0.1053	No
150	Serpinb2	18448	-0.424	-0.0948	No
151	Casp3	18669	-0.447	-0.0930	No
152	Gngt2	19166	-0.512	-0.1033	No
153	Gnb2	19360	-0.550	-0.0973	No
154	Atox1	19362	-0.551	-0.0815	No
155	Tnfaip3	19457	-0.573	-0.0699	No
156	Fyn	19539	-0.593	-0.0570	No
157	Casp9	19790	-0.683	-0.0500	No
158	Cd46	19825	-0.708	-0.0314	No
159	C2	19832	-0.715	-0.0112	No
160	Car2	19850	-0.731	0.0089	No