DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group3.GMP.neu_Pheno.cls
#Group1_versus_Group3_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_BILE_ACID_METABOLISM
Enrichment Score (ES)-0.27602693
Normalized Enrichment Score (NES)-1.1510981
Nominal p-value0.2188755
FDR q-value0.8697825
FWER p-Value0.932
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_BILE_ACID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Pfkm1800.7500.0247No
2Abca8b2760.6710.0502No
3Hao18070.5000.0461No
4Abca111240.4440.0503No
5Abca317310.3710.0366No
6Nr1h418670.3560.0458No
7Abca623460.3190.0362No
8Npc124820.3060.0432No
9Abca526630.2920.0473No
10Rbp128670.2780.0496No
11Gnpat31620.2600.0466No
12Abcd233710.2460.0472No
13Gnmt36320.2330.0447No
14Slc23a239860.2170.0367No
15Slc35b241000.2130.0407No
16Abca443870.1990.0353No
17Aldh9a147730.1820.0242No
18Slc29a149200.1750.0247No
19Pex1951040.1680.0231No
20Akr1d151110.1670.0303No
21Paox52320.1610.0316No
22Aqp954340.1530.0284No
23Bcar356000.1460.0267No
24Crot56870.1430.0288No
25Optn56900.1420.0351No
26Slc22a1857680.1380.0375No
27Hsd17b459920.1290.0321No
28Nr3c262650.1180.0237No
29Abcd363550.1140.0244No
30Fdxr65080.1080.0217No
31Acsl567120.1000.0160No
32Pxmp272250.081-0.0060No
33Abca980520.052-0.0451No
34Cyp46a183690.039-0.0592No
35Dhcr2484100.038-0.0595No
36Idi187350.027-0.0746No
37Gstk189590.018-0.0849No
38Gc94930.000-0.1117No
39Lonp29569-0.001-0.1154No
40Abcg410207-0.022-0.1464No
41Abcd110227-0.023-0.1463No
42Hsd17b1110405-0.029-0.1538No
43Acsl110443-0.031-0.1543No
44Dio210914-0.048-0.1757No
45Aldh1a110949-0.049-0.1752No
46Fads110963-0.050-0.1736No
47Pex611234-0.059-0.1845No
48Isoc111380-0.063-0.1890No
49Scp211595-0.071-0.1965No
50Pex711775-0.079-0.2019No
51Idh111935-0.085-0.2061No
52Pex11a12128-0.091-0.2116No
53Cyp7b112134-0.092-0.2077No
54Nedd412239-0.096-0.2086No
55Pex1612542-0.108-0.2189No
56Pnpla812621-0.112-0.2178No
57Cyp39a112628-0.112-0.2131No
58Lck12684-0.114-0.2107No
59Aldh8a112821-0.119-0.2122No
60Slc27a212967-0.122-0.2139No
61Pex113279-0.135-0.2235No
62Atxn113429-0.140-0.2246No
63Ephx213799-0.155-0.2362No
64Ar13912-0.159-0.2346No
65Fads214136-0.169-0.2382No
66Retsat14434-0.181-0.2450No
67Cyp27a114966-0.204-0.2624No
68Pex1314989-0.205-0.2543No
69Pecr15127-0.212-0.2516No
70Hsd3b715169-0.214-0.2441No
71Sod115622-0.236-0.2561No
72Slc23a115989-0.253-0.2631Yes
73Gclm16155-0.262-0.2596Yes
74Pex2616192-0.263-0.2495Yes
75Slc27a516408-0.277-0.2479Yes
76Idh216727-0.294-0.2506Yes
77Abca217042-0.313-0.2523Yes
78Cat17361-0.331-0.2533Yes
79Phyh17815-0.364-0.2597Yes
80Nudt1217957-0.376-0.2498Yes
81Pex11g18094-0.388-0.2392Yes
82Efhc118241-0.402-0.2284Yes
83Hacl118321-0.410-0.2139Yes
84Rxra18388-0.416-0.1985Yes
85Bmp618677-0.448-0.1928Yes
86Pex1218986-0.486-0.1864Yes
87Lipe19106-0.504-0.1697Yes
88Soat219136-0.508-0.1483Yes
89Tfcp2l119266-0.532-0.1308Yes
90Mlycd19492-0.581-0.1159Yes
91Amacr19529-0.590-0.0912Yes
92Klf119609-0.613-0.0676Yes
93Nr0b219614-0.613-0.0401Yes
94Sult2b119652-0.628-0.0137Yes
95Prdx519840-0.7210.0093Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_BILE_ACID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_BILE_ACID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for HALLMARK_BILE_ACID_METABOLISM