Details for gene set HALLMARK_ALLOGRAFT

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group3.GMP.neu_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	2
GeneSet	HALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)	-0.26597464
Normalized Enrichment Score (NES)	-1.0746038
Nominal p-value	0.35742188
FDR q-value	0.73741686
FWER p-Value	0.974

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Nlrp3	73	0.865	0.0206	No
2	Egfr	460	0.588	0.0177	No
3	Cd1d2	523	0.575	0.0307	No
4	Dyrk3	626	0.547	0.0408	No
5	Cd79a	790	0.504	0.0468	No
6	Ly86	878	0.483	0.0559	No
7	Il4	917	0.476	0.0673	No
8	Ctss	1198	0.434	0.0654	No
9	Rpl3l	1486	0.397	0.0621	No
10	Tlr6	1584	0.387	0.0681	No
11	Ripk2	1739	0.370	0.0707	No
12	Il2ra	1879	0.355	0.0737	No
13	Ltb	2071	0.340	0.0736	No
14	Jak2	2213	0.330	0.0757	No
15	Eif3a	2260	0.326	0.0825	No
16	Cd4	2331	0.320	0.0880	No
17	Il10	2358	0.318	0.0956	No
18	Stat1	2431	0.311	0.1007	No
19	Cd74	2561	0.300	0.1026	No
20	Tapbp	2643	0.294	0.1067	No
21	H2-Aa	2824	0.281	0.1056	No
22	Acvr2a	3086	0.264	0.0999	No
23	Tap2	3398	0.244	0.0911	No
24	Eif4g3	4055	0.215	0.0641	No
25	Ly75	4068	0.215	0.0695	No
26	Ccr5	4285	0.204	0.0644	No
27	Galnt1	4639	0.188	0.0519	No
28	Abce1	4770	0.182	0.0505	No
29	Brca1	4859	0.178	0.0510	No
30	Flna	4923	0.175	0.0528	No
31	Traf2	4960	0.174	0.0558	No
32	Zap70	5046	0.170	0.0563	No
33	Cd28	5120	0.167	0.0573	No
34	Wars1	5311	0.157	0.0522	No
35	Itgal	5469	0.152	0.0485	No
36	Il16	5496	0.151	0.0515	No
37	Cd86	5584	0.147	0.0512	No
38	Ets1	5780	0.137	0.0452	No
39	Abi1	5872	0.133	0.0444	No
40	Lcp2	6181	0.122	0.0323	No
41	Tpd52	6366	0.114	0.0262	No
42	Inhba	6383	0.113	0.0286	No
43	Fcgr2b	6492	0.109	0.0262	No
44	Tap1	6509	0.108	0.0285	No
45	Map3k7	6809	0.097	0.0161	No
46	Csf1	6957	0.092	0.0113	No
47	Hcls1	7190	0.082	0.0020	No
48	Mrpl3	7404	0.077	-0.0066	No
49	Socs5	7547	0.072	-0.0117	No
50	Cd80	7689	0.066	-0.0170	No
51	Bcl10	7822	0.061	-0.0219	No
52	Was	7953	0.055	-0.0269	No
53	Bcl3	8065	0.052	-0.0310	No
54	Nck1	8308	0.042	-0.0420	No
55	Akt1	8501	0.035	-0.0507	No
56	Tlr2	8773	0.026	-0.0636	No
57	Eif3j1	8818	0.024	-0.0652	No
58	Capg	9448	0.001	-0.0968	No
59	Il2	9490	0.000	-0.0989	No
60	Ube2n	10309	-0.026	-0.1393	No
61	H2-Ob	10326	-0.026	-0.1393	No
62	Il18	10351	-0.027	-0.1398	No
63	Prkcb	10370	-0.028	-0.1399	No
64	Elf4	10488	-0.032	-0.1449	No
65	Cfp	10700	-0.040	-0.1544	No
66	Hif1a	10775	-0.043	-0.1569	No
67	Irf4	11019	-0.052	-0.1677	No
68	Ptprc	11223	-0.058	-0.1763	No
69	Rps3a1	11271	-0.060	-0.1769	No
70	Map4k1	11323	-0.062	-0.1778	No
71	Ikbkb	11507	-0.068	-0.1851	No
72	Il15	11752	-0.078	-0.1952	No
73	Stab1	12100	-0.090	-0.2101	No
74	F2r	12120	-0.091	-0.2085	No
75	Ncf4	12174	-0.093	-0.2086	No
76	Tnf	12224	-0.095	-0.2083	No
77	Cd247	12272	-0.097	-0.2080	No
78	Ccr2	12371	-0.101	-0.2101	No
79	Lyn	12372	-0.101	-0.2073	No
80	Lck	12684	-0.114	-0.2197	No
81	Ube2d1	12759	-0.117	-0.2201	No
82	Npm1	12766	-0.117	-0.2172	No
83	Stat4	13100	-0.128	-0.2303	No
84	Irf8	13703	-0.150	-0.2564	No
85	Rpl9	13718	-0.151	-0.2529	No
86	Spi1	13831	-0.156	-0.2541	No
87	Cd96	13883	-0.158	-0.2522	No
88	Cd47	13955	-0.161	-0.2513	No
89	St8sia4	13986	-0.163	-0.2483	No
90	Glmn	14046	-0.165	-0.2466	No
91	Degs1	14204	-0.172	-0.2497	No
92	Tlr3	14220	-0.172	-0.2456	No
93	Irf7	14309	-0.175	-0.2451	No
94	Mtif2	14376	-0.178	-0.2434	No
95	Tgfb2	14387	-0.179	-0.2389	No
96	Psmb10	14512	-0.184	-0.2400	No
97	Eif5a	14746	-0.193	-0.2463	No
98	Csk	14882	-0.200	-0.2475	No
99	Ccnd3	14901	-0.201	-0.2428	No
100	Igsf6	15031	-0.207	-0.2435	No
101	Eif3d	15080	-0.210	-0.2400	No
102	Icam1	15313	-0.222	-0.2455	No
103	Ifngr2	15722	-0.240	-0.2592	Yes
104	Ptpn6	15769	-0.243	-0.2548	Yes
105	Srgn	15884	-0.249	-0.2535	Yes
106	Pf4	15942	-0.251	-0.2494	Yes
107	Il4ra	16029	-0.255	-0.2465	Yes
108	Socs1	16103	-0.259	-0.2430	Yes
109	Ifngr1	16159	-0.262	-0.2384	Yes
110	Crtam	16183	-0.263	-0.2322	Yes
111	Prkcg	16223	-0.265	-0.2267	Yes
112	Icosl	16356	-0.274	-0.2257	Yes
113	Tlr1	16451	-0.280	-0.2225	Yes
114	Ifnar2	16678	-0.292	-0.2257	Yes
115	Ccnd2	16936	-0.307	-0.2301	Yes
116	Il7	17011	-0.311	-0.2251	Yes
117	Fgr	17268	-0.326	-0.2288	Yes
118	Tgfb1	17328	-0.329	-0.2225	Yes
119	Il12rb1	17379	-0.333	-0.2157	Yes
120	Itgb2	17454	-0.337	-0.2100	Yes
121	Bcat1	17582	-0.346	-0.2067	Yes
122	Il18rap	17636	-0.350	-0.1996	Yes
123	Itk	17780	-0.360	-0.1967	Yes
124	H2-Oa	17809	-0.363	-0.1879	Yes
125	Nme1	17932	-0.374	-0.1836	Yes
126	Il12a	18011	-0.380	-0.1768	Yes
127	Hdac9	18117	-0.390	-0.1712	Yes
128	Gcnt1	18196	-0.397	-0.1640	Yes
129	Thy1	18574	-0.434	-0.1708	Yes
130	H2-DMb2	18712	-0.451	-0.1650	Yes
131	Trat1	18870	-0.470	-0.1597	Yes
132	Elane	19071	-0.498	-0.1558	Yes
133	Rps9	19088	-0.499	-0.1426	Yes
134	Il2rg	19233	-0.526	-0.1352	Yes
135	Ache	19238	-0.526	-0.1206	Yes
136	Fas	19313	-0.541	-0.1092	Yes
137	B2m	19493	-0.582	-0.1019	Yes
138	Il27ra	19504	-0.584	-0.0860	Yes
139	Il11	19636	-0.624	-0.0751	Yes
140	H2-DMa	19677	-0.636	-0.0593	Yes
141	Cd40	19682	-0.638	-0.0416	Yes
142	Gpr65	19730	-0.655	-0.0256	Yes
143	C2	19832	-0.715	-0.0107	Yes
144	Ccr1	19845	-0.727	0.0091	Yes