Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group2.GMP.neu_Pheno.cls #Group1_versus_Group2_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.19616015
Normalized Enrichment Score (NES)	0.7946576
Nominal p-value	0.8713235
FDR q-value	0.7729541
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Clcf1	120	0.880	0.0152	Yes
2	Trib1	299	0.732	0.0239	Yes
3	Ccnd1	461	0.663	0.0318	Yes
4	F3	490	0.656	0.0462	Yes
5	Gem	578	0.629	0.0570	Yes
6	Il18	600	0.624	0.0710	Yes
7	Slc2a3	676	0.605	0.0818	Yes
8	Icosl	949	0.544	0.0812	Yes
9	Pmepa1	1003	0.534	0.0914	Yes
10	Fosl1	1014	0.532	0.1037	Yes
11	Nr4a3	1115	0.517	0.1112	Yes
12	Ehd1	1158	0.510	0.1213	Yes
13	Tnfrsf9	1250	0.497	0.1287	Yes
14	Pde4b	1425	0.476	0.1315	Yes
15	Rcan1	1493	0.469	0.1394	Yes
16	Jag1	1708	0.441	0.1393	Yes
17	Cxcl10	1766	0.434	0.1469	Yes
18	Phlda1	1922	0.418	0.1491	Yes
19	Ppp1r15a	2029	0.410	0.1537	Yes
20	Egr1	2168	0.398	0.1563	Yes
21	Ripk2	2213	0.394	0.1636	Yes
22	Tubb2a	2370	0.381	0.1650	Yes
23	Tsc22d1	2732	0.355	0.1553	Yes
24	Ccrl2	2893	0.341	0.1555	Yes
25	Jun	2952	0.337	0.1607	Yes
26	Atf3	3068	0.329	0.1628	Yes
27	Pnrc1	3182	0.321	0.1649	Yes
28	Spsb1	3191	0.321	0.1722	Yes
29	Cd44	3267	0.315	0.1761	Yes
30	Per1	3371	0.309	0.1783	Yes
31	Lamb3	3384	0.307	0.1851	Yes
32	Nfkbie	3409	0.306	0.1913	Yes
33	Kdm6b	3523	0.298	0.1928	Yes
34	Tnfsf9	3598	0.294	0.1962	Yes
35	Tnfaip6	3755	0.281	0.1951	No
36	Ier3	4162	0.258	0.1809	No
37	Olr1	4242	0.253	0.1830	No
38	Marcks	4409	0.245	0.1805	No
39	Tnip1	4410	0.245	0.1864	No
40	Rela	4631	0.234	0.1810	No
41	F2rl1	4841	0.224	0.1759	No
42	Tnc	5252	0.205	0.1602	No
43	Plau	5322	0.201	0.1615	No
44	Fosl2	5589	0.186	0.1526	No
45	Cd80	5865	0.172	0.1429	No
46	Mxd1	5890	0.171	0.1459	No
47	Tap1	5949	0.168	0.1470	No
48	Tlr2	5980	0.167	0.1495	No
49	Nr4a2	5987	0.166	0.1532	No
50	Zbtb10	6137	0.160	0.1496	No
51	Dusp2	6258	0.155	0.1473	No
52	Plaur	6354	0.151	0.1462	No
53	Serpinb2	6419	0.148	0.1465	No
54	Plk2	6561	0.143	0.1429	No
55	Fjx1	6811	0.133	0.1335	No
56	Dnajb4	6916	0.128	0.1314	No
57	Plek	7006	0.125	0.1299	No
58	Dennd5a	7133	0.119	0.1264	No
59	Klf10	7306	0.112	0.1205	No
60	Serpinb8	7329	0.111	0.1221	No
61	Nampt	7396	0.107	0.1213	No
62	Ccnl1	7911	0.087	0.0975	No
63	Ifit2	7953	0.085	0.0975	No
64	Nfkb1	8093	0.080	0.0924	No
65	Birc2	8094	0.079	0.0944	No
66	Irf1	8163	0.077	0.0928	No
67	Tnfaip8	8206	0.075	0.0925	No
68	Ptpre	8220	0.074	0.0936	No
69	Litaf	8323	0.070	0.0901	No
70	Egr2	8514	0.064	0.0821	No
71	Smad3	8767	0.054	0.0707	No
72	Fut4	9379	0.030	0.0407	No
73	Ets2	9416	0.029	0.0396	No
74	Relb	9443	0.028	0.0390	No
75	Nfkb2	9445	0.028	0.0396	No
76	Nfkbia	9478	0.027	0.0386	No
77	Ier5	9504	0.026	0.0380	No
78	Gch1	9817	0.014	0.0226	No
79	Dram1	9912	0.011	0.0181	No
80	B4galt5	9921	0.010	0.0180	No
81	Tnf	10176	0.002	0.0052	No
82	Btg1	10626	-0.011	-0.0171	No
83	Btg2	11063	-0.026	-0.0384	No
84	Tank	11110	-0.028	-0.0401	No
85	Birc3	11148	-0.030	-0.0412	No
86	Il15ra	11454	-0.040	-0.0556	No
87	Rel	11637	-0.046	-0.0636	No
88	Snn	11765	-0.052	-0.0688	No
89	Pfkfb3	11800	-0.053	-0.0692	No
90	Ifih1	11976	-0.059	-0.0766	No
91	Atp2b1	12145	-0.064	-0.0835	No
92	Zc3h12a	12149	-0.065	-0.0821	No
93	Traf1	12436	-0.076	-0.0947	No
94	Gpr183	12445	-0.076	-0.0933	No
95	Klf4	12532	-0.079	-0.0957	No
96	Kynu	12710	-0.086	-0.1025	No
97	Ldlr	12795	-0.089	-0.1046	No
98	Ninj1	12847	-0.091	-0.1050	No
99	Cebpd	12916	-0.093	-0.1062	No
100	Nfat5	13021	-0.097	-0.1090	No
101	Btg3	13322	-0.108	-0.1216	No
102	Rigi	13334	-0.108	-0.1195	No
103	Vegfa	13536	-0.114	-0.1269	No
104	Panx1	13596	-0.117	-0.1270	No
105	Dusp4	13707	-0.121	-0.1296	No
106	Cflar	13814	-0.125	-0.1320	No
107	Tgif1	14088	-0.136	-0.1424	No
108	Socs3	14206	-0.141	-0.1449	No
109	B4galt1	14306	-0.144	-0.1464	No
110	Nr4a1	14374	-0.147	-0.1463	No
111	Sgk1	14577	-0.156	-0.1527	No
112	Tiparp	14618	-0.157	-0.1509	No
113	Sod2	14636	-0.158	-0.1480	No
114	Klf2	14826	-0.166	-0.1535	No
115	Eif1	14844	-0.167	-0.1503	No
116	Plpp3	14866	-0.168	-0.1473	No
117	Id2	14882	-0.169	-0.1440	No
118	Slc2a6	14913	-0.170	-0.1414	No
119	Klf9	14939	-0.171	-0.1385	No
120	Myc	15084	-0.176	-0.1415	No
121	Pdlim5	15135	-0.179	-0.1397	No
122	Trip10	15291	-0.186	-0.1430	No
123	Nfe2l2	15300	-0.186	-0.1390	No
124	Gadd45a	15311	-0.187	-0.1350	No
125	Bcl2a1d	15396	-0.189	-0.1346	No
126	Cdkn1a	15413	-0.189	-0.1309	No
127	Rhob	15671	-0.200	-0.1390	No
128	Map2k3	15755	-0.203	-0.1383	No
129	Abca1	15867	-0.208	-0.1388	No
130	Sphk1	15899	-0.210	-0.1353	No
131	Maff	15933	-0.211	-0.1319	No
132	Cd69	15964	-0.213	-0.1283	No
133	Stat5a	16191	-0.224	-0.1343	No
134	Ptgs2	16330	-0.232	-0.1356	No
135	Yrdc	16398	-0.236	-0.1333	No
136	Sat1	16632	-0.245	-0.1391	No
137	Inhba	16638	-0.246	-0.1334	No
138	Irs2	16647	-0.247	-0.1279	No
139	Klf6	16658	-0.247	-0.1224	No
140	Rnf19b	16698	-0.250	-0.1184	No
141	Ptger4	16760	-0.253	-0.1154	No
142	Tnip2	16911	-0.262	-0.1166	No
143	Map3k8	17157	-0.275	-0.1223	No
144	Slc16a6	17167	-0.275	-0.1161	No
145	Cebpb	17217	-0.278	-0.1119	No
146	Ier2	17448	-0.292	-0.1164	No
147	Tnfaip3	17506	-0.296	-0.1122	No
148	Bcl6	17660	-0.308	-0.1124	No
149	Il6st	17686	-0.309	-0.1062	No
150	Zfp36	17703	-0.310	-0.0996	No
151	Hbegf	17742	-0.313	-0.0939	No
152	Sqstm1	17979	-0.329	-0.0979	No
153	Gadd45b	18116	-0.339	-0.0966	No
154	G0s2	18376	-0.361	-0.1009	No
155	Dusp1	18403	-0.364	-0.0934	No
156	Il7r	18617	-0.385	-0.0949	No
157	Junb	18894	-0.414	-0.0988	No
158	Dusp5	18993	-0.426	-0.0935	No
159	Fos	19006	-0.427	-0.0838	No
160	Nfil3	19041	-0.431	-0.0751	No
161	Gfpt2	19154	-0.443	-0.0701	No
162	Ifngr2	19300	-0.467	-0.0661	No
163	Bhlhe40	19475	-0.502	-0.0627	No
164	Icam1	19562	-0.526	-0.0544	No
165	Mcl1	19714	-0.571	-0.0482	No
166	Bcl3	19787	-0.600	-0.0374	No
167	Csf1	19795	-0.604	-0.0232	No
168	Fosb	19876	-0.655	-0.0114	No
169	Tnfaip2	19974	-0.784	0.0026	No