DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group2.GMP.neu_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_PI3K_AKT_MTOR_SIGNALING
Enrichment Score (ES)-0.31230143
Normalized Enrichment Score (NES)-1.6306797
Nominal p-value0.0
FDR q-value0.1345492
FWER p-Value0.178
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Il43760.7000.0126No
2Fgf226270.6160.0277No
3Prkaa211480.5120.0246No
4Prkcb15680.4610.0243No
5Egfr19890.4120.0218No
6Adcy225390.3690.0108No
7Sfn27230.3560.0176No
8Itpr229580.3370.0210No
9Grk240390.265-0.0213No
10Cxcr440540.265-0.0101No
11Rit142510.252-0.0086No
12Plcg142600.2520.0023No
13Map2k645810.235-0.0032No
14Slc2a151530.209-0.0225No
15E2f153130.202-0.0214No
16Irak454220.196-0.0180No
17Raf158520.173-0.0318No
18Nod160650.163-0.0351No
19Tiam161340.161-0.0313No
20Cab39l65080.145-0.0435No
21Csnk2b65510.144-0.0391No
22Ppp2r1b69250.128-0.0521No
23Pak469480.127-0.0475No
24Vav369740.126-0.0431No
25Mknk172160.116-0.0500No
26Akt1s173300.111-0.0507No
27Cdk176550.097-0.0626No
28Nfkbib77590.093-0.0636No
29Camk478630.089-0.0647No
30Rptor79430.086-0.0649No
31Map3k784430.066-0.0869No
32Prkar2a86040.061-0.0922No
33Dapp190580.043-0.1130No
34Stat299370.010-0.1566No
35Pin1100370.007-0.1613No
36Ywhab102110.001-0.1699No
37Rps6ka110444-0.005-0.1813No
38Grb210503-0.007-0.1839No
39Pten10867-0.021-0.2012No
40Tsc210950-0.023-0.2043No
41Mapk111312-0.036-0.2208No
42Pikfyve11358-0.038-0.2214No
43Cab3911657-0.047-0.2342No
44Traf211829-0.054-0.2403No
45Ptpn1111917-0.057-0.2422No
46Ripk112071-0.062-0.2471No
47Smad212094-0.063-0.2453No
48Tbk112238-0.068-0.2495No
49Ddit312250-0.068-0.2469No
50Mapk812275-0.069-0.2450No
51Trib312350-0.072-0.2455No
52Dusp312602-0.082-0.2544No
53Mapkap112656-0.084-0.2533No
54Mapk912812-0.090-0.2571No
55Nck113263-0.106-0.2749No
56Pfn113307-0.107-0.2722No
57Pik3r313325-0.108-0.2682No
58Cdk413759-0.123-0.2845No
59Mknk213841-0.126-0.2829No
60Them414073-0.135-0.2884No
61Gsk3b14091-0.136-0.2831No
62Eif4e14158-0.139-0.2802No
63Arhgdia14232-0.142-0.2775No
64Tnfrsf1a14361-0.147-0.2773No
65Gna1414525-0.153-0.2786No
66Pla2g12a14673-0.160-0.2788No
67Actr315341-0.188-0.3039Yes
68Cdkn1a15413-0.189-0.2989Yes
69Pdk115584-0.196-0.2986Yes
70Prkag115672-0.200-0.2940Yes
71Ube2n15747-0.203-0.2886Yes
72Map2k315755-0.203-0.2798Yes
73Atf116021-0.216-0.2834Yes
74Il2rg16027-0.216-0.2740Yes
75Cdk216050-0.217-0.2653Yes
76Cltc16062-0.218-0.2561Yes
77Ecsit16337-0.232-0.2594Yes
78Acaca16848-0.258-0.2734Yes
79Ube2d317026-0.268-0.2702Yes
80Arpc317181-0.276-0.2656Yes
81Rac117212-0.278-0.2546Yes
82Actr217243-0.280-0.2435Yes
83Sla17409-0.290-0.2388Yes
84Sqstm117979-0.329-0.2525Yes
85Calr18093-0.337-0.2430Yes
86Ap2m118373-0.361-0.2408Yes
87Mapk1018559-0.379-0.2331Yes
88Cfl118869-0.411-0.2301Yes
89Akt119183-0.448-0.2257Yes
90Lck19233-0.456-0.2077Yes
91Plcb119238-0.457-0.1873Yes
92Cdkn1b19306-0.468-0.1697Yes
93Arf119401-0.485-0.1526Yes
94Hsp90b119466-0.500-0.1334Yes
95Ralb19495-0.508-0.1119Yes
96Ppp1ca19543-0.521-0.0909Yes
97Hras19600-0.538-0.0695Yes
98Rps6ka319911-0.688-0.0542Yes
99Myd8820020-1.3330.0003Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PI3K_AKT_MTOR_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PI3K_AKT_MTOR_SIGNALING