DatasetGMP.GMP.neu_Pheno.cls
#Group1_versus_Group2.GMP.neu_Pheno.cls
#Group1_versus_Group2_repos
PhenotypeGMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class1
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.29462585
Normalized Enrichment Score (NES)-1.1279215
Nominal p-value0.36575875
FDR q-value0.5526238
FWER p-Value0.967
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Aldh6a13380.7180.0014No
2Fdx14990.6530.0100No
3Ldhb5900.6260.0215No
4Pdp17480.5860.0286No
5Mrps1211520.5110.0214No
6Ndufb314500.4750.0186No
7Sdhb14570.4740.0304No
8Bax15420.4630.0381No
9Idh3g15520.4630.0495No
10Ndufc119300.4180.0412No
11Iscu20100.4110.0477No
12Cyb5r320830.4050.0545No
13Fxn25470.3690.0406No
14Slc25a1126130.3640.0466No
15Ndufa526750.3580.0527No
16Atp6v1g128230.3470.0542No
17Atp6v0c29860.3350.0546No
18Timm930660.3290.0591No
19Atp1b133360.3110.0535No
20Ndufa634140.3060.0574No
21Bdh234880.3010.0615No
22Mpc140270.2660.0412No
23Cox7a242290.2540.0375No
24Cox1042850.2510.0412No
25Uqcrc243170.2490.0460No
26Timm5048590.2230.0245No
27Mgst349590.2190.0251No
28Hadhb60080.165-0.0235No
29Ogdh64050.149-0.0396No
30Supv3l166240.141-0.0470No
31Sdhc66820.138-0.0464No
32Mrps1168300.132-0.0504No
33Ndufv270210.124-0.0568No
34Fh171950.116-0.0625No
35Nnt74140.107-0.0708No
36Ndufa974420.106-0.0694No
37Gpx475720.100-0.0734No
38Atp6ap177560.093-0.0802No
39Bckdha77790.092-0.0789No
40Timm8b78050.091-0.0779No
41Ndufa778160.091-0.0760No
42Echs180230.082-0.0843No
43Atp6v0e81760.076-0.0900No
44Casp782410.073-0.0914No
45Cox6b184680.066-0.1011No
46Ndufa386830.058-0.1104No
47Sdha87080.057-0.1101No
48Sucla287480.055-0.1107No
49Mtx289930.046-0.1218No
50Dlst90150.045-0.1217No
51Phyh91270.040-0.1263No
52Idh292200.036-0.1300No
53Etfa92590.035-0.1310No
54Uqcrfs192620.035-0.1302No
55Surf194130.029-0.1370No
56Atp6v1e195660.024-0.1441No
57Decr195730.023-0.1438No
58Mrps1596660.021-0.1479No
59Cox8a97040.019-0.1492No
60Slc25a1297110.019-0.1490No
61Slc25a398930.012-0.1579No
62Mrpl1110738-0.016-0.2000No
63Ndufs310785-0.017-0.2019No
64Mrps2210956-0.023-0.2098No
65Atp6v1f11076-0.027-0.2151No
66Hadha11248-0.033-0.2229No
67Cyc111259-0.034-0.2226No
68Pdhx11275-0.035-0.2224No
69Ndufs411279-0.035-0.2217No
70Cox7b11418-0.039-0.2276No
71Oxa1l11632-0.046-0.2372No
72Mtrr11729-0.051-0.2407No
73Acadsb11754-0.052-0.2406No
74Ech111876-0.055-0.2453No
75Afg3l212132-0.064-0.2565No
76Atp6v0b12140-0.064-0.2552No
77Uqcrq12180-0.066-0.2555No
78Por12232-0.068-0.2563No
79Tcirg112363-0.073-0.2610No
80Etfdh12427-0.075-0.2622No
81Tomm70a12526-0.079-0.2652No
82Atp6v1c112581-0.081-0.2658No
83Pdhb12585-0.081-0.2639No
84Opa112750-0.088-0.2699No
85Polr2f12779-0.089-0.2690No
86Alas113141-0.102-0.2846No
87Etfb13200-0.104-0.2849No
88Ndufb513226-0.105-0.2835No
89Timm1013365-0.109-0.2876No
90Immt13505-0.114-0.2917Yes
91Oat13550-0.115-0.2910Yes
92Cox5b13569-0.116-0.2889Yes
93Nqo213628-0.118-0.2888Yes
94Vdac213729-0.122-0.2907Yes
95Idh3a13736-0.122-0.2879Yes
96Mfn213738-0.122-0.2848Yes
97Glud113742-0.122-0.2818Yes
98Cox5a13784-0.124-0.2807Yes
99Abcb713820-0.125-0.2793Yes
100Mdh113824-0.125-0.2762Yes
101Cox6c13960-0.131-0.2797Yes
102Cox7a2l14021-0.133-0.2793Yes
103Ndufab114229-0.141-0.2861Yes
104Cox1114302-0.144-0.2861Yes
105Cyb5a14350-0.146-0.2847Yes
106Ndufa114360-0.147-0.2814Yes
107Mdh214366-0.147-0.2779Yes
108Rhot114469-0.150-0.2792Yes
109Aifm114480-0.151-0.2758Yes
110Cs14519-0.153-0.2738Yes
111Acadm14651-0.159-0.2764Yes
112Mrpl3514725-0.162-0.2759Yes
113Cox4i114929-0.171-0.2818Yes
114Ndufc215055-0.175-0.2836Yes
115Slc25a415137-0.179-0.2831Yes
116Hccs15152-0.179-0.2792Yes
117Timm17a15206-0.181-0.2772Yes
118Mtrf115334-0.188-0.2788Yes
119Gpi115531-0.194-0.2837Yes
120Lrpprc15545-0.194-0.2794Yes
121Ndufb715591-0.197-0.2766Yes
122Ndufa415622-0.198-0.2731Yes
123Ndufs115814-0.206-0.2774Yes
124Maob15815-0.206-0.2722Yes
125Slc25a515849-0.207-0.2685Yes
126Ndufs215881-0.209-0.2647Yes
127Uqcr1115996-0.214-0.2650Yes
128Acat116073-0.219-0.2632Yes
129Mrps3016077-0.219-0.2577Yes
130Dlat16106-0.220-0.2535Yes
131Atp6v1h16113-0.221-0.2482Yes
132Vdac316272-0.229-0.2503Yes
133Ndufa216327-0.232-0.2471Yes
134Atp6v1d16446-0.238-0.2469Yes
135Mrpl1516499-0.240-0.2434Yes
136Cox1716579-0.243-0.2411Yes
137Pdha116718-0.251-0.2417Yes
138Rhot216738-0.252-0.2362Yes
139Tomm2216812-0.256-0.2333Yes
140Uqcrh16906-0.262-0.2313Yes
141Mrpl3417016-0.267-0.2299Yes
142Acaa217084-0.270-0.2264Yes
143Ndufs817194-0.276-0.2248Yes
144Idh3b17204-0.277-0.2182Yes
145Got217225-0.279-0.2120Yes
146Uqcr1017242-0.280-0.2057Yes
147Atp5pb17320-0.284-0.2023Yes
148Vdac117338-0.285-0.1958Yes
149Cox6a117354-0.287-0.1893Yes
150Dld17436-0.292-0.1859Yes
151Idh117515-0.296-0.1822Yes
152Phb217655-0.308-0.1813Yes
153Hsd17b1017678-0.309-0.1745Yes
154Suclg117864-0.321-0.1756Yes
155Ndufv117949-0.327-0.1715Yes
156Ndufs718010-0.331-0.1660Yes
157Ndufb618066-0.335-0.1602Yes
158Aco218132-0.340-0.1548Yes
159Uqcrb18210-0.346-0.1498Yes
160Hspa918298-0.354-0.1451Yes
161Timm1318353-0.359-0.1386Yes
162Uqcrc118388-0.362-0.1311Yes
163Ndufa818443-0.368-0.1244Yes
164Cox1518520-0.375-0.1186Yes
165Retsat18694-0.394-0.1172Yes
166Htra218710-0.395-0.1079Yes
167Acadvl18748-0.399-0.0995Yes
168Ndufb818763-0.400-0.0900Yes
169Sdhd18902-0.415-0.0863Yes
170Cpt1a19003-0.427-0.0804Yes
171Cox7c19100-0.437-0.0741Yes
172Acaa1a19172-0.446-0.0662Yes
173Grpel119249-0.460-0.0583Yes
174Ndufs619328-0.472-0.0501Yes
175Ldha19331-0.472-0.0381Yes
176Pmpca19338-0.473-0.0263Yes
177Slc25a2019499-0.509-0.0213Yes
178Prdx319693-0.563-0.0167Yes
179Eci119859-0.643-0.0085Yes
180Ndufb219879-0.6580.0074Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION