Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group2.GMP.neu_Pheno.cls #Group1_versus_Group2_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_GLYCOLYSIS
Enrichment Score (ES)	-0.24371661
Normalized Enrichment Score (NES)	-1.1549511
Nominal p-value	0.23260869
FDR q-value	0.6440483
FWER p-Value	0.946

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Sdc2	16	1.158	0.0279	No
2	Capn5	63	0.978	0.0498	No
3	Ndst3	459	0.664	0.0463	No
4	Idua	532	0.642	0.0586	No
5	Rragd	625	0.617	0.0692	No
6	Pgls	774	0.580	0.0761	No
7	Gal3st1	1421	0.477	0.0554	No
8	Angptl4	1437	0.476	0.0664	No
9	Nt5e	1682	0.445	0.0652	No
10	Col5a1	1769	0.433	0.0716	No
11	Egfr	1989	0.412	0.0707	No
12	Ang	2093	0.405	0.0756	No
13	Eno2	2349	0.383	0.0722	No
14	Gapdhs	2499	0.371	0.0739	No
15	Glce	2923	0.339	0.0610	No
16	Gpc1	3012	0.333	0.0648	No
17	Gnpda1	3093	0.328	0.0689	No
18	Gmppa	3195	0.320	0.0717	No
19	Cd44	3267	0.315	0.0760	No
20	Plod2	3972	0.268	0.0471	No
21	Pcx	4028	0.266	0.0510	No
22	Cxcr4	4054	0.265	0.0563	No
23	Ier3	4162	0.258	0.0573	No
24	Tgfbi	4338	0.248	0.0546	No
25	Phka2	4459	0.242	0.0545	No
26	Glrx	4666	0.232	0.0499	No
27	Pygl	4794	0.226	0.0491	No
28	Paxip1	4864	0.222	0.0511	No
29	Fam162a	4887	0.221	0.0555	No
30	Met	4983	0.218	0.0561	No
31	Stc2	4999	0.217	0.0607	No
32	Hk2	5001	0.217	0.0661	No
33	Plod1	5046	0.214	0.0691	No
34	Tpst1	5248	0.205	0.0641	No
35	Hs6st2	5271	0.204	0.0680	No
36	Gpc4	5289	0.203	0.0722	No
37	Ak4	5505	0.191	0.0661	No
38	Ext1	5577	0.186	0.0671	No
39	Agrn	5624	0.184	0.0694	No
40	Pgk1	6092	0.162	0.0498	No
41	Agl	6234	0.157	0.0466	No
42	Sdhc	6682	0.138	0.0275	No
43	Gale	6800	0.133	0.0249	No
44	Galk2	6821	0.133	0.0272	No
45	Aldh7a1	6986	0.126	0.0221	No
46	Vcan	7078	0.121	0.0205	No
47	Homer1	7257	0.114	0.0143	No
48	Kdelr3	7289	0.113	0.0156	No
49	Med24	7341	0.110	0.0157	No
50	Lhpp	7435	0.106	0.0137	No
51	Chst12	7472	0.104	0.0144	No
52	Cdk1	7655	0.097	0.0077	No
53	Depdc1a	7757	0.093	0.0049	No
54	Gpr87	7895	0.088	0.0001	No
55	G6pdx	8010	0.082	-0.0036	No
56	Stmn1	8026	0.082	-0.0023	No
57	B3galt6	8047	0.081	-0.0013	No
58	Srd5a3	8054	0.081	0.0004	No
59	Pmm2	8297	0.071	-0.0100	No
60	Egln3	8364	0.069	-0.0116	No
61	Slc25a10	8419	0.067	-0.0127	No
62	Tpi1	8523	0.064	-0.0163	No
63	Kif20a	8571	0.062	-0.0171	No
64	Slc16a3	8761	0.055	-0.0253	No
65	Fut8	9154	0.039	-0.0441	No
66	Pam	9176	0.038	-0.0442	No
67	Cog2	9365	0.031	-0.0529	No
68	Cited2	9536	0.025	-0.0608	No
69	Bpnt1	9879	0.012	-0.0778	No
70	Slc25a13	10031	0.007	-0.0852	No
71	Qsox1	10059	0.007	-0.0864	No
72	Xylt2	10061	0.007	-0.0863	No
73	Galk1	10142	0.004	-0.0902	No
74	Gfus	10362	-0.003	-0.1012	No
75	Dcn	10628	-0.011	-0.1142	No
76	Alg1	10684	-0.014	-0.1167	No
77	Fbp2	10875	-0.021	-0.1257	No
78	Pgam1	11122	-0.028	-0.1374	No
79	Hax1	11183	-0.031	-0.1397	No
80	Adora2b	11227	-0.033	-0.1410	No
81	B4galt2	11235	-0.033	-0.1406	No
82	Tgfa	11372	-0.038	-0.1465	No
83	Rpe	11399	-0.039	-0.1468	No
84	Hs2st1	11485	-0.041	-0.1501	No
85	Lct	11663	-0.048	-0.1578	No
86	Prps1	11957	-0.058	-0.1711	No
87	Ankzf1	12025	-0.060	-0.1730	No
88	Cln6	12048	-0.061	-0.1726	No
89	Gne	12195	-0.066	-0.1783	No
90	Akr1a1	12244	-0.068	-0.1791	No
91	Eno1b	12304	-0.071	-0.1803	No
92	Aldh9a1	12384	-0.073	-0.1824	No
93	Pfkfb1	12772	-0.088	-0.1998	No
94	Ext2	13146	-0.102	-0.2160	No
95	Ppp2cb	13169	-0.103	-0.2146	No
96	Ppfia4	13228	-0.105	-0.2149	No
97	Kif2a	13243	-0.105	-0.2130	No
98	Slc35a3	13454	-0.111	-0.2208	No
99	Mpi	13479	-0.113	-0.2193	No
100	Gmppb	13512	-0.114	-0.2181	No
101	Zfp292	13513	-0.114	-0.2152	No
102	Vegfa	13536	-0.114	-0.2135	No
103	Nasp	13590	-0.117	-0.2133	No
104	Pdk3	13618	-0.118	-0.2117	No
105	Gclc	13818	-0.125	-0.2187	No
106	Mdh1	13824	-0.125	-0.2158	No
107	Isg20	13833	-0.126	-0.2131	No
108	Pgm2	13839	-0.126	-0.2102	No
109	Slc37a4	13854	-0.127	-0.2078	No
110	Rbck1	14108	-0.137	-0.2171	No
111	Arpp19	14187	-0.140	-0.2176	No
112	B4galt1	14306	-0.144	-0.2200	No
113	Casp6	14314	-0.144	-0.2168	No
114	Cyb5a	14350	-0.146	-0.2149	No
115	Mdh2	14366	-0.147	-0.2120	No
116	Mxi1	14383	-0.148	-0.2092	No
117	Mertk	14443	-0.150	-0.2084	No
118	Chpf2	14478	-0.151	-0.2064	No
119	Mif	14632	-0.157	-0.2102	No
120	Cth	14884	-0.169	-0.2187	No
121	Gpc3	14990	-0.173	-0.2197	No
122	Gys1	15030	-0.174	-0.2173	No
123	Abcb6	15249	-0.183	-0.2238	No
124	Pygb	15265	-0.184	-0.2200	No
125	Me2	15266	-0.184	-0.2154	No
126	Ero1a	15285	-0.185	-0.2117	No
127	B4galt7	15588	-0.197	-0.2221	No
128	Copb2	15665	-0.200	-0.2210	No
129	Ppia	15710	-0.202	-0.2182	No
130	Fkbp4	15846	-0.207	-0.2199	No
131	Cenpa	15952	-0.212	-0.2199	No
132	Taldo1	16095	-0.220	-0.2216	No
133	Ecd	16227	-0.226	-0.2226	No
134	Irs2	16647	-0.247	-0.2376	Yes
135	Hdlbp	16678	-0.248	-0.2330	Yes
136	Pkm	16683	-0.249	-0.2270	Yes
137	Aurka	16713	-0.251	-0.2223	Yes
138	Polr3k	16818	-0.256	-0.2212	Yes
139	Vldlr	16843	-0.258	-0.2160	Yes
140	Pgam2	17197	-0.277	-0.2269	Yes
141	Got2	17225	-0.279	-0.2214	Yes
142	Gusb	17301	-0.283	-0.2182	Yes
143	Dld	17436	-0.292	-0.2177	Yes
144	Cacna1h	17439	-0.292	-0.2106	Yes
145	Spag4	17492	-0.295	-0.2059	Yes
146	Idh1	17515	-0.296	-0.1996	Yes
147	Pfkp	17593	-0.303	-0.1960	Yes
148	Nsdhl	17680	-0.309	-0.1927	Yes
149	Sap30	17813	-0.318	-0.1915	Yes
150	Me1	17827	-0.319	-0.1842	Yes
151	Chst1	17944	-0.327	-0.1820	Yes
152	Sdc1	18006	-0.331	-0.1769	Yes
153	Aldoa	18110	-0.338	-0.1737	Yes
154	Gfpt1	18117	-0.339	-0.1656	Yes
155	Txn1	18234	-0.347	-0.1628	Yes
156	Hmmr	18237	-0.348	-0.1543	Yes
157	Ugp2	18262	-0.351	-0.1469	Yes
158	B3gat3	18444	-0.368	-0.1469	Yes
159	Psmc4	18497	-0.372	-0.1403	Yes
160	Ndufv3	18505	-0.373	-0.1314	Yes
161	Lhx9	18755	-0.400	-0.1340	Yes
162	Nanp	18817	-0.406	-0.1270	Yes
163	Bik	18838	-0.408	-0.1179	Yes
164	B4galt4	18900	-0.414	-0.1107	Yes
165	Ak3	18928	-0.418	-0.1017	Yes
166	P4ha1	19004	-0.427	-0.0950	Yes
167	Got1	19086	-0.436	-0.0882	Yes
168	Sod1	19236	-0.456	-0.0844	Yes
169	B3gnt3	19250	-0.460	-0.0737	Yes
170	Chpf	19315	-0.469	-0.0653	Yes
171	Ldha	19331	-0.472	-0.0544	Yes
172	Pkp2	19547	-0.522	-0.0523	Yes
173	Hspa5	19713	-0.571	-0.0464	Yes
174	Il13ra1	19747	-0.580	-0.0337	Yes
175	Ddit4	19775	-0.595	-0.0204	Yes
176	Sdc3	19883	-0.662	-0.0094	Yes
177	Ldhc	19890	-0.667	0.0069	Yes