Details for gene set HALLMARK_DNA

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group2.GMP.neu_Pheno.cls #Group1_versus_Group2_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	1
GeneSet	HALLMARK_DNA_REPAIR
Enrichment Score (ES)	-0.28790817
Normalized Enrichment Score (NES)	-1.2797894
Nominal p-value	0.16269842
FDR q-value	0.5198378
FWER p-Value	0.791

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Polr2g	322	0.724	0.0100	No
2	Brf2	632	0.615	0.0167	No
3	Usp11	1005	0.533	0.0173	No
4	Rpa3	1324	0.489	0.0189	No
5	Pde4b	1425	0.476	0.0311	No
6	Ell	1490	0.470	0.0449	No
7	Gmpr2	2018	0.410	0.0332	No
8	Rev3l	2129	0.402	0.0423	No
9	Rad51	2395	0.379	0.0426	No
10	Tk2	2901	0.340	0.0295	No
11	Ddb2	3197	0.320	0.0263	No
12	Rfc2	3350	0.310	0.0298	No
13	Vps28	3641	0.290	0.0258	No
14	Gtf3c5	3697	0.286	0.0334	No
15	Cda	3891	0.274	0.0335	No
16	Stx3	4533	0.238	0.0099	No
17	Snapc5	4931	0.220	-0.0021	No
18	Ccno	4958	0.219	0.0045	No
19	Zwint	5158	0.209	0.0021	No
20	Pold1	5281	0.203	0.0033	No
21	Gsdme	5564	0.187	-0.0041	No
22	Taf13	5601	0.186	0.0008	No
23	Trp53	5795	0.176	-0.0026	No
24	Upf3b	5956	0.168	-0.0045	No
25	Zfp707	5990	0.166	-0.0002	No
26	Smad5	6057	0.163	0.0024	No
27	Ago4	6500	0.145	-0.0146	No
28	Pde6g	7039	0.123	-0.0372	No
29	Ercc8	7145	0.119	-0.0382	No
30	Aaas	7258	0.114	-0.0397	No
31	Pola2	7282	0.113	-0.0368	No
32	Umps	7308	0.112	-0.0340	No
33	Polr2c	7421	0.107	-0.0358	No
34	Guk1	7537	0.101	-0.0379	No
35	Gpx4	7572	0.100	-0.0360	No
36	Taf12	7608	0.099	-0.0342	No
37	Rfc3	7652	0.097	-0.0328	No
38	Tsg101	7681	0.096	-0.0307	No
39	Xpc	7797	0.092	-0.0332	No
40	Rfc5	7867	0.089	-0.0335	No
41	Pola1	7924	0.086	-0.0332	No
42	Adcy6	8218	0.074	-0.0452	No
43	Polb	8229	0.074	-0.0431	No
44	Nt5c3	8234	0.073	-0.0406	No
45	Taf10	8327	0.070	-0.0427	No
46	Rnmt	8420	0.067	-0.0449	No
47	Srsf6	8516	0.064	-0.0474	No
48	Tyms	8517	0.064	-0.0450	No
49	Dgcr8	9066	0.043	-0.0710	No
50	Snapc4	9393	0.030	-0.0864	No
51	Surf1	9413	0.029	-0.0863	No
52	Rpa2	9484	0.026	-0.0888	No
53	Cetn2	9535	0.025	-0.0904	No
54	Pom121	9558	0.024	-0.0907	No
55	Rae1	9608	0.022	-0.0923	No
56	Polr3gl	9634	0.021	-0.0928	No
57	Supt5	9721	0.019	-0.0965	No
58	Rala	9762	0.017	-0.0979	No
59	Dut	9935	0.010	-0.1062	No
60	Rfc4	10026	0.008	-0.1104	No
61	Prim1	10138	0.004	-0.1158	No
62	Lig1	10218	0.001	-0.1198	No
63	Rrm2b	10251	0.000	-0.1214	No
64	Tarbp2	10298	-0.000	-0.1237	No
65	Ercc5	10326	-0.002	-0.1250	No
66	Nfx1	10356	-0.002	-0.1264	No
67	Nme4	10365	-0.003	-0.1267	No
68	Gtf2h5	10409	-0.004	-0.1287	No
69	Cmpk2	10487	-0.006	-0.1323	No
70	Polr2i	10498	-0.007	-0.1326	No
71	Poll	10515	-0.007	-0.1331	No
72	Ercc4	10662	-0.012	-0.1400	No
73	Taf1c	10772	-0.017	-0.1449	No
74	Cstf3	10927	-0.022	-0.1518	No
75	Ercc1	10970	-0.023	-0.1531	No
76	Sdcbp	11034	-0.025	-0.1554	No
77	Taf6	11052	-0.026	-0.1553	No
78	Rbx1	11083	-0.027	-0.1558	No
79	Pold3	11244	-0.033	-0.1626	No
80	Polh	11356	-0.038	-0.1669	No
81	Pole4	11510	-0.042	-0.1730	No
82	Eloa	11730	-0.051	-0.1822	No
83	Rad52	12091	-0.062	-0.1981	No
84	Ada	12411	-0.075	-0.2114	No
85	Polr1h	12490	-0.078	-0.2125	No
86	Adrm1	12533	-0.079	-0.2118	No
87	Dad1	12751	-0.088	-0.2195	No
88	Polr2f	12779	-0.089	-0.2177	No
89	Mpc2	12786	-0.089	-0.2148	No
90	Npr2	13026	-0.097	-0.2233	No
91	Ncbp2	13154	-0.102	-0.2260	No
92	Nelfcd	13242	-0.105	-0.2265	No
93	Alyref	13405	-0.110	-0.2307	No
94	Polr1d	13510	-0.114	-0.2318	No
95	Ercc3	13737	-0.122	-0.2388	No
96	Bcap31	13866	-0.127	-0.2406	No
97	Nudt21	14150	-0.138	-0.2499	No
98	Sac3d1	14509	-0.152	-0.2624	No
99	Mrpl40	15018	-0.174	-0.2816	Yes
100	Supt4a	15033	-0.174	-0.2760	Yes
101	Polr2a	15081	-0.176	-0.2720	Yes
102	Ddb1	15088	-0.177	-0.2659	Yes
103	Polr2k	15154	-0.179	-0.2627	Yes
104	Itpa	15174	-0.180	-0.2571	Yes
105	Sf3a3	15342	-0.188	-0.2587	Yes
106	Polr3c	15480	-0.192	-0.2587	Yes
107	Dctn4	15928	-0.211	-0.2736	Yes
108	Polr2h	15955	-0.212	-0.2672	Yes
109	Gtf2a2	16224	-0.226	-0.2725	Yes
110	Fen1	16246	-0.227	-0.2653	Yes
111	Polr2j	16278	-0.229	-0.2586	Yes
112	Arl6ip1	16557	-0.242	-0.2638	Yes
113	Cox17	16579	-0.243	-0.2561	Yes
114	Ssrp1	16671	-0.248	-0.2517	Yes
115	Gtf2h1	16780	-0.254	-0.2480	Yes
116	Hcls1	16826	-0.257	-0.2410	Yes
117	Nme1	16893	-0.261	-0.2348	Yes
118	Ak1	16923	-0.262	-0.2268	Yes
119	Nelfb	16947	-0.264	-0.2184	Yes
120	Nelfe	17072	-0.270	-0.2149	Yes
121	Gtf2f1	17312	-0.283	-0.2167	Yes
122	Nme3	17571	-0.301	-0.2188	Yes
123	Dguok	17582	-0.303	-0.2083	Yes
124	Pcna	17745	-0.313	-0.2052	Yes
125	Cant1	17760	-0.314	-0.1945	Yes
126	Taf9	17794	-0.316	-0.1847	Yes
127	Edf1	17861	-0.321	-0.1764	Yes
128	Polr2d	17916	-0.325	-0.1674	Yes
129	Polr2e	18096	-0.337	-0.1642	Yes
130	Mpg	18351	-0.359	-0.1640	Yes
131	Clp1	18364	-0.360	-0.1516	Yes
132	Nt5c	18379	-0.361	-0.1392	Yes
133	Gtf2b	18395	-0.362	-0.1269	Yes
134	Ak3	18928	-0.418	-0.1385	Yes
135	Vps37b	18962	-0.422	-0.1249	Yes
136	Eif1b	18997	-0.426	-0.1112	Yes
137	Ercc2	19067	-0.434	-0.0990	Yes
138	Nudt9	19114	-0.439	-0.0855	Yes
139	Gtf2h3	19121	-0.439	-0.0699	Yes
140	Polr1c	19355	-0.476	-0.0644	Yes
141	Pnp	19409	-0.488	-0.0494	Yes
142	Impdh2	19417	-0.490	-0.0320	Yes
143	Sec61a1	19536	-0.519	-0.0192	Yes
144	Pold4	19796	-0.604	-0.0104	Yes
145	Aprt	19800	-0.605	0.0114	Yes