Details for gene set HALLMARK_APICAL

Table: GSEA Results Summary

Dataset	GMP.GMP.neu_Pheno.cls #Group1_versus_Group2.GMP.neu_Pheno.cls #Group1_versus_Group2_repos
Phenotype	GMP.neu_Pheno.cls#Group1_versus_Group2_repos
Upregulated in class	0
GeneSet	HALLMARK_APICAL_JUNCTION
Enrichment Score (ES)	0.21300256
Normalized Enrichment Score (NES)	0.9862095
Nominal p-value	0.49239543
FDR q-value	1.0
FWER p-Value	0.998

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Bmp1	198	0.797	0.0116	Yes
2	Cdh11	214	0.788	0.0321	Yes
3	Nectin4	286	0.740	0.0486	Yes
4	Shroom2	325	0.722	0.0662	Yes
5	Baiap2	362	0.704	0.0834	Yes
6	Adamts5	485	0.657	0.0951	Yes
7	Amigo1	798	0.572	0.0948	Yes
8	Actn2	892	0.554	0.1051	Yes
9	Wnk4	1122	0.516	0.1075	Yes
10	Pbx2	1184	0.506	0.1181	Yes
11	Rras	1230	0.501	0.1294	Yes
12	Adra1b	1417	0.478	0.1330	Yes
13	Cd274	1463	0.473	0.1435	Yes
14	Mvd	1656	0.449	0.1460	Yes
15	Gamt	1945	0.417	0.1428	Yes
16	Egfr	1989	0.412	0.1517	Yes
17	Pkd1	2025	0.410	0.1611	Yes
18	Atp1a3	2230	0.392	0.1614	Yes
19	Nectin2	2258	0.390	0.1706	Yes
20	Cldn14	2350	0.383	0.1764	Yes
21	Kcnh2	2409	0.378	0.1837	Yes
22	Ptk2	2509	0.371	0.1887	Yes
23	Nrtn	2545	0.369	0.1970	Yes
24	Col16a1	2614	0.364	0.2034	Yes
25	Pals1	2619	0.363	0.2130	Yes
26	Ikbkg	3141	0.324	0.1955	No
27	Lamb3	3384	0.307	0.1917	No
28	Layn	3436	0.304	0.1973	No
29	Tspan4	3549	0.297	0.1997	No
30	Col17a1	3657	0.289	0.2022	No
31	Cercam	3730	0.283	0.2062	No
32	Itgb4	4025	0.266	0.1986	No
33	Plcg1	4260	0.252	0.1936	No
34	Tgfbi	4338	0.248	0.1965	No
35	Calb2	4352	0.247	0.2025	No
36	Nf1	4718	0.230	0.1903	No
37	Src	4755	0.228	0.1947	No
38	Icam2	4894	0.221	0.1937	No
39	Rac2	5148	0.210	0.1867	No
40	Nectin1	5240	0.205	0.1876	No
41	Amigo2	5334	0.200	0.1884	No
42	Ldlrap1	5362	0.199	0.1924	No
43	Akt2	5787	0.176	0.1758	No
44	Tubg1	5823	0.174	0.1788	No
45	Nfasc	6298	0.154	0.1591	No
46	Tmem8b	6376	0.150	0.1593	No
47	Mdk	6450	0.147	0.1596	No
48	Nlgn2	6489	0.146	0.1616	No
49	Ctnna1	6886	0.130	0.1452	No
50	Cdh1	7043	0.123	0.1406	No
51	Nexn	7055	0.122	0.1434	No
52	Vcan	7078	0.121	0.1456	No
53	Evl	7159	0.118	0.1447	No
54	Thbs3	7166	0.118	0.1476	No
55	Rsu1	7224	0.115	0.1479	No
56	Myl12b	7231	0.115	0.1507	No
57	Vav2	7286	0.113	0.1510	No
58	Irs1	7458	0.105	0.1452	No
59	Mapk13	7500	0.103	0.1460	No
60	Nf2	7509	0.103	0.1483	No
61	Stx4a	7519	0.102	0.1506	No
62	Pik3cb	7530	0.102	0.1529	No
63	Akt3	7707	0.095	0.1466	No
64	Cntn1	7890	0.088	0.1398	No
65	Map3k20	8309	0.071	0.1207	No
66	Itga2	8329	0.070	0.1216	No
67	Cap1	8815	0.053	0.0986	No
68	Dlg1	8922	0.048	0.0946	No
69	Lima1	8926	0.048	0.0958	No
70	Rasa1	9030	0.044	0.0918	No
71	Arpc2	9254	0.035	0.0815	No
72	Tial1	9361	0.031	0.0770	No
73	Pard6g	9402	0.030	0.0758	No
74	Adam23	9735	0.018	0.0596	No
75	Cd34	9829	0.014	0.0553	No
76	Exoc4	9963	0.009	0.0488	No
77	Negr1	10040	0.007	0.0452	No
78	Myl9	10269	0.000	0.0337	No
79	Mapk14	10385	-0.004	0.0280	No
80	Sirpa	10465	-0.005	0.0242	No
81	Wasl	10513	-0.007	0.0220	No
82	Zyx	10842	-0.019	0.0060	No
83	Nrxn2	10851	-0.020	0.0062	No
84	Pten	10867	-0.021	0.0060	No
85	Dhx16	10981	-0.024	0.0009	No
86	Sorbs3	11042	-0.026	-0.0014	No
87	Icam5	11192	-0.031	-0.0080	No
88	Itga9	11373	-0.038	-0.0161	No
89	Shc1	11558	-0.044	-0.0242	No
90	Fbn1	11662	-0.048	-0.0280	No
91	Mpzl1	11738	-0.051	-0.0304	No
92	Map4k2	11797	-0.053	-0.0319	No
93	Icam4	11805	-0.053	-0.0308	No
94	Actn3	12041	-0.061	-0.0410	No
95	Slit2	12044	-0.061	-0.0395	No
96	Jup	12055	-0.061	-0.0383	No
97	Taok2	12069	-0.062	-0.0373	No
98	Nrap	12214	-0.067	-0.0427	No
99	Tjp1	12302	-0.071	-0.0452	No
100	Traf1	12436	-0.076	-0.0499	No
101	Myh9	12441	-0.076	-0.0480	No
102	Rhof	12600	-0.082	-0.0538	No
103	Syk	12769	-0.088	-0.0598	No
104	Pecam1	12821	-0.090	-0.0600	No
105	Arhgef6	12897	-0.092	-0.0612	No
106	Crat	12920	-0.093	-0.0598	No
107	Pfn1	13307	-0.107	-0.0764	No
108	Pik3r3	13325	-0.108	-0.0743	No
109	Gnai2	13345	-0.109	-0.0723	No
110	Itgb1	13693	-0.121	-0.0865	No
111	Adam9	13907	-0.129	-0.0938	No
112	Actn1	13980	-0.131	-0.0938	No
113	Cadm3	14082	-0.136	-0.0953	No
114	Nlgn3	14106	-0.137	-0.0927	No
115	Ywhah	14230	-0.142	-0.0951	No
116	B4galt1	14306	-0.144	-0.0950	No
117	Sympk	14398	-0.148	-0.0955	No
118	Cx3cl1	14444	-0.150	-0.0937	No
119	Cnn2	14488	-0.151	-0.0918	No
120	Inppl1	14582	-0.156	-0.0923	No
121	Itga3	14718	-0.161	-0.0947	No
122	Actn4	15031	-0.174	-0.1057	No
123	Ptprc	15044	-0.175	-0.1016	No
124	Alox8	15052	-0.175	-0.0972	No
125	Cd86	15110	-0.178	-0.0953	No
126	Myh10	15593	-0.197	-0.1142	No
127	Vcam1	15709	-0.202	-0.1146	No
128	Tsc1	15777	-0.205	-0.1124	No
129	Mmp2	15969	-0.213	-0.1163	No
130	Lama3	16007	-0.215	-0.1123	No
131	Skap2	16377	-0.235	-0.1245	No
132	Insig1	16788	-0.254	-0.1383	No
133	Jam3	16945	-0.264	-0.1390	No
134	Amh	17013	-0.267	-0.1351	No
135	Cdh6	17029	-0.268	-0.1286	No
136	Gnai1	17068	-0.270	-0.1233	No
137	Adam15	17074	-0.270	-0.1162	No
138	Gtf2f1	17312	-0.283	-0.1205	No
139	Parva	17334	-0.285	-0.1138	No
140	Ctnnd1	17413	-0.290	-0.1099	No
141	Actg1	17420	-0.291	-0.1023	No
142	Cdh8	17433	-0.291	-0.0951	No
143	Epb41l2	17610	-0.305	-0.0957	No
144	Vwf	17954	-0.328	-0.1041	No
145	Msn	18069	-0.336	-0.1007	No
146	Cldn15	18235	-0.347	-0.0997	No
147	Hadh	18242	-0.348	-0.0905	No
148	Vasp	18322	-0.356	-0.0849	No
149	Actb	18696	-0.394	-0.0930	No
150	Sgce	18699	-0.394	-0.0824	No
151	Nectin3	18731	-0.397	-0.0733	No
152	Cdh4	19231	-0.456	-0.0861	No
153	Thy1	19374	-0.480	-0.0802	No
154	Cdk8	19457	-0.497	-0.0709	No
155	Icam1	19562	-0.526	-0.0619	No
156	Hras	19600	-0.538	-0.0492	No
157	Vcl	19810	-0.609	-0.0433	No
158	Cadm2	19849	-0.637	-0.0280	No
159	Sdc3	19883	-0.662	-0.0117	No
160	Itga10	19923	-0.698	0.0052	No