DatasetGMP.GMP.mono_Pheno.cls
#Group6_versus_Group8.GMP.mono_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeGMP.mono_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class5
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.2610871
Normalized Enrichment Score (NES)-1.0699424
Nominal p-value0.39615384
FDR q-value0.70641583
FWER p-Value0.994
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Ifit31970.9020.0153No
2Marchf12440.8430.0354No
3Serping16870.6450.0335No
4Irf57350.6260.0479No
5Tnfaip38850.5820.0568No
6Ifi3010190.5670.0660No
7Cfb14660.5170.0606No
8Ciita15590.4980.0697No
9Fas17060.4680.0758No
10Cd4017920.4510.0840No
11Mx222400.4050.0755No
12Nod127630.3780.0632No
13Bank128050.3750.0713No
14Lats230820.3540.0688No
15Il733140.3320.0677No
16Tdrd735520.3110.0657No
17Arl4a36760.3010.0684No
18Lcp236870.3010.0758No
19Tnfaip641620.2710.0628No
20Il2rb43770.2610.0605No
21Ccl547780.2440.0498No
22Pml48460.2400.0532No
23Oas248800.2370.0581No
24Il18bp52800.2230.0469No
25Cd3852820.2230.0527No
26Irf754730.2160.0503No
27Socs155580.2120.0523No
28Znfx157380.2030.0499No
29Xaf157630.2010.0542No
30Cmtr161950.1870.0407No
31Ptgs265140.1730.0317No
32Samhd166830.1670.0289No
33Sod267490.1650.0305No
34Nup9368520.1610.0303No
35Ptpn268570.1610.0344No
36Wars168760.1600.0378No
37Fcgr169270.1580.0398No
38Cd8674360.1380.0218No
39Cd6975390.1340.0209No
40Samd9l79900.1180.0048No
41Stat382720.110-0.0043No
42Jak283850.107-0.0062No
43Pfkp84390.105-0.0057No
44H2-Aa84460.105-0.0032No
45Il1587730.094-0.0147No
46Ncoa389360.089-0.0193No
47Vcam190830.085-0.0232No
48Batf291050.085-0.0219No
49Nfkb191960.082-0.0236No
50Helz292450.081-0.0235No
51Itgb793560.077-0.0262No
52Stat193670.077-0.0246No
53Trafd193810.076-0.0231No
54Irf294670.074-0.0248No
55Casp796650.068-0.0314No
56Eif2ak298200.064-0.0363No
57Il10ra99630.060-0.0408No
58Ptpn6100910.056-0.0448No
59Rapgef6100920.056-0.0433No
60Adar103100.049-0.0513No
61Ogfr103910.047-0.0535No
62Trim14104140.046-0.0532No
63Pla2g4a104870.045-0.0551No
64Sspn104900.045-0.0540No
65Pnpt1107050.039-0.0621No
66St8sia4108400.035-0.0669No
67Nampt109870.031-0.0723No
68Isg20111990.024-0.0807No
69Mvp113990.018-0.0887No
70Arid5b114280.017-0.0895No
71H2-DMa114610.016-0.0904No
72Ripk1116670.010-0.0989No
73Ifih112463-0.004-0.1327No
74Auts212481-0.004-0.1333No
75Hif1a12503-0.005-0.1341No
76Ube2l612548-0.006-0.1358No
77Parp1412654-0.008-0.1400No
78Fgl212796-0.012-0.1457No
79Casp812989-0.018-0.1534No
80Rsad213269-0.026-0.1647No
81Ripk213393-0.029-0.1692No
82Trim2613664-0.037-0.1797No
83Psmb913851-0.042-0.1865No
84Cd7413892-0.043-0.1871No
85Zbp114096-0.050-0.1944No
86Psma314407-0.058-0.2061No
87Btg114408-0.058-0.2046No
88Oas314430-0.058-0.2040No
89Gch114797-0.069-0.2178No
90Ptpn115105-0.079-0.2288No
91Il15ra15216-0.083-0.2313No
92Irf815289-0.086-0.2321No
93Isg1515336-0.087-0.2318No
94Sppl2a15383-0.089-0.2314No
95Il4ra15393-0.089-0.2295No
96Irf415447-0.090-0.2294No
97Peli115584-0.094-0.2327No
98Ifit215691-0.097-0.2347No
99Nlrc515759-0.099-0.2349No
100Rnf21315938-0.105-0.2398No
101Ido115950-0.105-0.2375No
102Trim2516009-0.107-0.2371No
103Psma216107-0.110-0.2384No
104Mthfd216122-0.111-0.2361No
105Cfh16154-0.112-0.2345No
106Dhx5816241-0.115-0.2351No
107Sp11016248-0.115-0.2323No
108Slamf716288-0.117-0.2310No
109Ifi3516369-0.119-0.2312No
110Sri16475-0.123-0.2325No
111Stat216559-0.127-0.2327No
112Txnip16646-0.130-0.2330No
113Tnfaip216675-0.131-0.2307No
114Isoc116680-0.131-0.2275No
115Rbck116691-0.131-0.2244No
116Cxcl1016716-0.132-0.2220No
117Psmb216728-0.133-0.2190No
118Plscr116799-0.135-0.2185No
119Herc616802-0.135-0.2150No
120Usp1817055-0.144-0.2220No
121Icam117106-0.146-0.2203No
122Pnp17124-0.146-0.2172No
123Cmklr117163-0.148-0.2149No
124Epsti117338-0.154-0.2183No
125Pde4b17530-0.161-0.2222No
126St3gal517549-0.162-0.2187No
127Irf117602-0.164-0.2166No
128Stat417618-0.165-0.2130No
129Tor1b18106-0.182-0.2290No
130Rnf3118289-0.189-0.2318No
131Slc25a2818363-0.191-0.2299No
132Irf918431-0.195-0.2276No
133Pim118467-0.196-0.2239No
134Casp118513-0.198-0.2207No
135Bst218564-0.200-0.2175No
136Psmb1019129-0.223-0.2357No
137Trim2119199-0.226-0.2327No
138Lap319555-0.243-0.2415No
139Psme120015-0.268-0.2541Yes
140Cmpk220104-0.274-0.2506Yes
141Ifitm220220-0.280-0.2482Yes
142Sectm1a20349-0.288-0.2461Yes
143Ifnar220428-0.290-0.2418Yes
144Bpgm20503-0.294-0.2373Yes
145Gbp320556-0.298-0.2317Yes
146Psme220627-0.302-0.2267Yes
147Gpr1820630-0.302-0.2189Yes
148Parp1220649-0.303-0.2117Yes
149Vamp520651-0.303-0.2038Yes
150Tap120864-0.317-0.2045Yes
151Casp421261-0.340-0.2125Yes
152Lysmd221332-0.344-0.2064Yes
153P2ry1421387-0.349-0.1996Yes
154Ifi4421397-0.350-0.1908Yes
155Eif4e321542-0.357-0.1876Yes
156Rigi21566-0.359-0.1791Yes
157Nmi21722-0.371-0.1760Yes
158Casp321760-0.375-0.1677Yes
159Oasl121765-0.375-0.1581Yes
160Ddx6022105-0.408-0.1618Yes
161Ifi2722197-0.419-0.1547Yes
162Ifitm322256-0.425-0.1460Yes
163Tapbp22368-0.437-0.1393Yes
164Tnfsf1022439-0.446-0.1306Yes
165Cd27422482-0.452-0.1205Yes
166Selp22503-0.455-0.1094Yes
167Vamp822632-0.474-0.1024Yes
168Myd8822650-0.476-0.0907Yes
169Nfkbia22674-0.479-0.0791Yes
170Ly6e22692-0.481-0.0672Yes
171Psmb822759-0.492-0.0571Yes
172Rtp422864-0.509-0.0482Yes
173B2m23299-0.618-0.0504Yes
174Cdkn1a23508-0.752-0.0396Yes
175Lgals3bp23521-0.763-0.0201Yes
176Socs323587-0.9310.0016Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE