DatasetGMP.GMP.mono_Pheno.cls
#Group6_versus_Group8.GMP.mono_Pheno.cls
#Group6_versus_Group8_repos
PhenotypeGMP.mono_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class4
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)0.28675103
Normalized Enrichment Score (NES)1.2810643
Nominal p-value0.062264152
FDR q-value0.52838784
FWER p-Value0.798
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rnf144b91.5090.0311Yes
2Osmr1210.9840.0468Yes
3Pdpn1780.9200.0636Yes
4Kcnmb22580.8360.0777Yes
5Adora2b2640.8280.0947Yes
6Sgms22920.8000.1102Yes
7Tlr16060.6790.1110Yes
8Clec5a6630.6560.1223Yes
9Slc7a28280.5970.1278Yes
10Hrh19220.5770.1358Yes
11Dcbld29470.5750.1468Yes
12Plaur11710.5480.1487Yes
13Rgs113960.5240.1500Yes
14Olr114450.5190.1588Yes
15Cybb14490.5190.1695Yes
16Tnfrsf915040.5070.1777Yes
17Kif1b15440.5000.1865Yes
18Klf615710.4950.1957Yes
19Pik3r516220.4840.2037Yes
20Met17350.4620.2085Yes
21Nmur117890.4520.2157Yes
22Cd4017920.4510.2250Yes
23Ccl2419280.4350.2283Yes
24Ptafr19950.4270.2344Yes
25Stab120580.4200.2405Yes
26Pcdh720680.4180.2488Yes
27Cx3cl123340.4020.2459Yes
28Csf123500.4010.2536Yes
29Adgre125220.3900.2544Yes
30Timp126080.3820.2587Yes
31Hpn27310.3790.2614Yes
32Axl28390.3710.2646Yes
33Irak231560.3470.2584Yes
34Kcnj232490.3390.2615Yes
35Ptgir33990.3240.2619Yes
36Mefv36120.3060.2592Yes
37Lcp236870.3010.2623Yes
38Ldlr36990.3000.2681Yes
39Lamp337610.2970.2717Yes
40Osm40200.2800.2665Yes
41Tacr140210.2800.2724Yes
42Cd8240870.2750.2753Yes
43Tnfaip641620.2710.2778Yes
44Rgs1642440.2660.2799Yes
45Il2rb43770.2610.2797Yes
46Inhba46070.2500.2752Yes
47Ccl547780.2440.2730Yes
48Tnfrsf1b47880.2430.2777Yes
49Adrm148240.2410.2812Yes
50Rela48540.2390.2850Yes
51P2rx749380.2340.2863Yes
52Icosl50400.2280.2868Yes
53Ahr54170.2190.2753No
54Irf754730.2160.2774No
55F355270.2130.2796No
56Scarf156390.2080.2792No
57Atp2c156770.2060.2819No
58Lyn57260.2030.2841No
59Atp2b159560.1970.2785No
60Abi162490.1840.2699No
61Nlrp362820.1820.2723No
62Best164770.1750.2677No
63Btg265120.1740.2698No
64Raf165150.1730.2734No
65Ifnar165850.1710.2740No
66Tnfsf967320.1650.2712No
67Itga573180.1420.2492No
68Acvr2a74890.1360.2448No
69Cd6975390.1340.2455No
70Csf3r76120.1310.2452No
71Gabbr176270.1310.2473No
72Il18r178190.1240.2417No
73Gnai378640.1230.2424No
74Slc31a280820.1160.2356No
75Gpc383130.1090.2280No
76Psen187240.0950.2125No
77Il1587730.0940.2124No
78Scn1b89000.0900.2090No
79Nfkb191960.0820.1981No
80Nod292330.0810.1983No
81Sele92680.0800.1985No
82Aqp994090.0760.1941No
83Cd1494890.0730.1922No
84Rhog97350.0660.1832No
85Ros197820.0650.1826No
86Eif2ak298200.0640.1823No
87Il18rap98350.0630.1830No
88Il10ra99630.0600.1789No
89Lck102050.0520.1697No
90Ifngr2108390.0350.1434No
91Sema4d109310.0320.1402No
92Nampt109870.0310.1385No
93Slc7a1111600.0250.1317No
94Chst2112520.0220.1283No
95Mmp14116760.0100.1105No
96Atp2a2119150.0030.1004No
97Gna15120180.0000.0960No
98Hif1a12503-0.0050.0755No
99Mxd112515-0.0050.0752No
100Tnfsf1512529-0.0060.0747No
101Pvr12712-0.0100.0672No
102Ptger213228-0.0240.0457No
103Ripk213393-0.0290.0393No
104Lif13538-0.0320.0339No
105Cd4813558-0.0330.0337No
106Slc11a213580-0.0340.0335No
107Ptpre13880-0.0430.0217No
108Ptger414247-0.0540.0072No
109Npffr214545-0.062-0.0042No
110Ebi314556-0.062-0.0033No
111Il1814744-0.067-0.0099No
112Gch114797-0.069-0.0106No
113Il15ra15216-0.083-0.0267No
114Il4ra15393-0.089-0.0324No
115Acvr1b15565-0.093-0.0377No
116Slc4a415678-0.097-0.0405No
117Sell15896-0.103-0.0476No
118Aplnr16102-0.110-0.0540No
119Slamf116108-0.110-0.0519No
120Sri16475-0.123-0.0650No
121P2ry216629-0.129-0.0688No
122Tlr216654-0.130-0.0671No
123Cxcl1016716-0.132-0.0670No
124Icam117106-0.146-0.0805No
125Cmklr117163-0.148-0.0798No
126Kcna317345-0.155-0.0843No
127Pde4b17530-0.161-0.0888No
128Irf117602-0.164-0.0884No
129Fzd517738-0.169-0.0907No
130Slc31a117898-0.176-0.0938No
131Il1b18269-0.188-0.1056No
132Il1018432-0.195-0.1085No
133P2rx418563-0.200-0.1099No
134Bst218564-0.200-0.1057No
135Gp1ba19057-0.221-0.1221No
136Rasgrp119119-0.222-0.1200No
137Msr119223-0.228-0.1197No
138Selenos19575-0.244-0.1296No
139Lpar119683-0.250-0.1289No
140Slc28a220165-0.277-0.1437No
141Hbegf20625-0.302-0.1569No
142Tacr320635-0.302-0.1510No
143Itgb320975-0.321-0.1588No
144Tlr321014-0.323-0.1537No
145Gpr18321330-0.344-0.1599No
146Emp321537-0.356-0.1613No
147Nmi21722-0.371-0.1614No
148Ccr721930-0.392-0.1621No
149Sphk122086-0.405-0.1602No
150Il7r22167-0.415-0.1550No
151Slc1a222293-0.429-0.1514No
152Icam422341-0.434-0.1444No
153Tapbp22368-0.437-0.1364No
154Tnfsf1022439-0.446-0.1301No
155Myc22533-0.459-0.1245No
156Calcrl22536-0.459-0.1150No
157Ccrl222628-0.474-0.1090No
158Nfkbia22674-0.479-0.1009No
159Ly6e22692-0.481-0.0916No
160Cxcr622786-0.497-0.0853No
161Rtp422864-0.509-0.0779No
162Abca122949-0.527-0.0705No
163Ifitm123476-0.718-0.0780No
164Il1r123498-0.741-0.0635No
165Cdkn1a23508-0.752-0.0482No
166Gpr13223538-0.793-0.0329No
167Itgb823563-0.845-0.0163No
168Ffar223583-0.9050.0017No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE