Details for gene set HALLMARK

Table: GSEA Results Summary

Dataset	GMP.GMP.mono_Pheno.cls #Group6_versus_Group8.GMP.mono_Pheno.cls #Group6_versus_Group8_repos
Phenotype	GMP.mono_Pheno.cls#Group6_versus_Group8_repos
Upregulated in class	4
GeneSet	HALLMARK_APOPTOSIS
Enrichment Score (ES)	0.25481522
Normalized Enrichment Score (NES)	1.0693696
Nominal p-value	0.36419752
FDR q-value	0.60558933
FWER p-Value	0.992

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Lgals3	3	1.760	0.0534	Yes
2	Bik	60	1.099	0.0845	Yes
3	Anxa1	856	0.589	0.0686	Yes
4	Fez1	1055	0.559	0.0772	Yes
5	App	1532	0.502	0.0722	Yes
6	Gucy2e	1560	0.498	0.0862	Yes
7	Cth	1646	0.480	0.0972	Yes
8	Fas	1706	0.468	0.1089	Yes
9	Gsr	1856	0.444	0.1161	Yes
10	Tnfrsf12a	1857	0.444	0.1296	Yes
11	Clu	1883	0.439	0.1419	Yes
12	Lef1	1909	0.437	0.1541	Yes
13	Gpx3	1919	0.435	0.1669	Yes
14	Nedd9	2195	0.406	0.1676	Yes
15	Mcl1	2526	0.390	0.1654	Yes
16	Timp1	2608	0.382	0.1736	Yes
17	Bgn	2705	0.380	0.1811	Yes
18	Hmox1	2812	0.374	0.1879	Yes
19	Lmna	2842	0.371	0.1980	Yes
20	Bmf	2872	0.369	0.2080	Yes
21	Ppp2r5b	2876	0.368	0.2190	Yes
22	Tnf	3059	0.357	0.2221	Yes
23	Rhob	3154	0.347	0.2287	Yes
24	Jun	3385	0.324	0.2288	Yes
25	Atf3	3388	0.324	0.2385	Yes
26	Bid	3634	0.305	0.2374	Yes
27	Psen2	3734	0.298	0.2422	Yes
28	Bax	3815	0.293	0.2477	Yes
29	Smad7	3857	0.290	0.2548	Yes
30	Timp3	4059	0.277	0.2547	No
31	Rela	4854	0.239	0.2282	No
32	Cd38	5282	0.223	0.2167	No
33	Dcn	5583	0.211	0.2104	No
34	Ier3	5931	0.198	0.2016	No
35	Btg3	6049	0.194	0.2026	No
36	Plcb2	6458	0.175	0.1905	No
37	Btg2	6512	0.174	0.1935	No
38	Madd	6628	0.169	0.1938	No
39	Sod2	6749	0.165	0.1937	No
40	Sptan1	6855	0.161	0.1941	No
41	Gadd45a	7019	0.154	0.1918	No
42	Cd44	7139	0.149	0.1913	No
43	Tgfb2	7272	0.144	0.1900	No
44	Cd69	7539	0.134	0.1828	No
45	Cav1	7686	0.129	0.1805	No
46	Retsat	7866	0.123	0.1766	No
47	Eno2	8186	0.112	0.1664	No
48	Gpx4	8308	0.109	0.1646	No
49	Ddit3	8311	0.109	0.1678	No
50	Psen1	8724	0.095	0.1532	No
51	Casp9	8986	0.088	0.1447	No
52	Ank	9069	0.086	0.1438	No
53	Gsn	9316	0.079	0.1358	No
54	Cd14	9489	0.073	0.1307	No
55	Casp7	9665	0.068	0.1253	No
56	Crebbp	10271	0.051	0.1011	No
57	Xiap	10502	0.044	0.0926	No
58	Ppp3r1	10539	0.043	0.0924	No
59	Rara	10588	0.042	0.0916	No
60	Isg20	11199	0.024	0.0664	No
61	Slc20a1	11287	0.022	0.0633	No
62	Wee1	11369	0.019	0.0605	No
63	Cdkn1b	11452	0.017	0.0575	No
64	Cyld	11900	0.004	0.0386	No
65	Dnm1l	12006	0.001	0.0341	No
66	Gna15	12018	0.000	0.0336	No
67	Bcl2l2	12457	-0.004	0.0151	No
68	Rhot2	12474	-0.004	0.0145	No
69	Krt18	12647	-0.008	0.0075	No
70	Cflar	12822	-0.013	0.0005	No
71	Brca1	12829	-0.013	0.0006	No
72	Casp8	12989	-0.018	-0.0056	No
73	Cdk2	13027	-0.018	-0.0066	No
74	Sqstm1	13045	-0.019	-0.0068	No
75	Pak1	13134	-0.022	-0.0099	No
76	Ctnnb1	13353	-0.028	-0.0183	No
77	Birc3	13770	-0.040	-0.0348	No
78	Ccnd1	13886	-0.043	-0.0384	No
79	Ifngr1	13890	-0.043	-0.0372	No
80	Aifm3	14117	-0.050	-0.0453	No
81	Erbb3	14259	-0.054	-0.0497	No
82	Add1	14299	-0.055	-0.0496	No
83	Ppt1	14382	-0.057	-0.0514	No
84	Dffa	14450	-0.059	-0.0525	No
85	Cdc25b	14501	-0.060	-0.0528	No
86	Il18	14744	-0.067	-0.0610	No
87	Gch1	14797	-0.069	-0.0611	No
88	Igf2r	14972	-0.075	-0.0663	No
89	Bcap31	15020	-0.076	-0.0659	No
90	Rock1	15317	-0.087	-0.0759	No
91	Bcl2l1	15361	-0.088	-0.0750	No
92	Pmaip1	15524	-0.092	-0.0791	No
93	Vdac2	15576	-0.094	-0.0785	No
94	Emp1	15626	-0.095	-0.0777	No
95	Top2a	15907	-0.104	-0.0864	No
96	Hmgb2	16067	-0.109	-0.0899	No
97	Dap	16083	-0.110	-0.0872	No
98	Dnajc3	16194	-0.113	-0.0884	No
99	Sat1	16498	-0.124	-0.0976	No
100	Diablo	16531	-0.125	-0.0951	No
101	Txnip	16646	-0.130	-0.0960	No
102	Casp2	16878	-0.137	-0.1017	No
103	Dap3	17136	-0.147	-0.1081	No
104	Mgmt	17178	-0.149	-0.1054	No
105	H1f0	17482	-0.159	-0.1134	No
106	Dpyd	17491	-0.159	-0.1089	No
107	Irf1	17602	-0.164	-0.1086	No
108	Etf1	17673	-0.167	-0.1065	No
109	Fdxr	18093	-0.182	-0.1189	No
110	Bcl2l11	18224	-0.186	-0.1187	No
111	Il1b	18269	-0.188	-0.1149	No
112	Pea15a	18468	-0.196	-0.1173	No
113	Casp1	18513	-0.198	-0.1132	No
114	Sod1	18830	-0.210	-0.1202	No
115	Dnaja1	18888	-0.213	-0.1162	No
116	Pdcd4	18941	-0.216	-0.1118	No
117	Tspo	19285	-0.230	-0.1194	No
118	Bnip3l	19454	-0.238	-0.1193	No
119	Gadd45b	19571	-0.244	-0.1168	No
120	Tgfbr3	19762	-0.254	-0.1172	No
121	Ebp	20308	-0.285	-0.1317	No
122	Bcl10	20554	-0.297	-0.1331	No
123	Sc5d	20690	-0.305	-0.1296	No
124	Tap1	20864	-0.317	-0.1273	No
125	F2	20913	-0.319	-0.1196	No
126	Gstm2	20970	-0.320	-0.1122	No
127	Ptk2	21011	-0.323	-0.1041	No
128	Casp4	21261	-0.340	-0.1044	No
129	F2r	21273	-0.341	-0.0945	No
130	Hgf	21294	-0.342	-0.0849	No
131	Mmp2	21353	-0.346	-0.0769	No
132	Gpx1	21573	-0.360	-0.0752	No
133	Timp2	21620	-0.363	-0.0661	No
134	Casp3	21760	-0.375	-0.0607	No
135	Ccnd2	21852	-0.384	-0.0528	No
136	Pdgfrb	21894	-0.388	-0.0428	No
137	Ifitm3	22256	-0.425	-0.0452	No
138	Tnfsf10	22439	-0.446	-0.0394	No
139	Nefh	22447	-0.447	-0.0261	No
140	Satb1	22913	-0.520	-0.0300	No
141	Rnasel	23260	-0.606	-0.0263	No
142	Casp6	23313	-0.621	-0.0097	No
143	Cdkn1a	23508	-0.752	0.0049	No