Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	GMP.GMP.mono_Pheno.cls #Group3_versus_Group4.GMP.mono_Pheno.cls #Group3_versus_Group4_repos
Phenotype	GMP.mono_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class	3
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.182395
Normalized Enrichment Score (NES)	-0.75288886
Nominal p-value	0.8956693
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Nr4a3	32	1.062	0.0268	No
2	Tnfaip3	122	0.850	0.0455	No
3	Ccnd1	222	0.756	0.0613	No
4	Lif	336	0.686	0.0747	No
5	Plk2	425	0.653	0.0882	No
6	F2rl1	447	0.646	0.1045	No
7	Sqstm1	648	0.578	0.1113	No
8	Spsb1	697	0.570	0.1243	No
9	Relb	1272	0.467	0.1122	No
10	Il18	1781	0.414	0.1016	No
11	Ier3	1858	0.406	0.1091	No
12	Tnip1	1883	0.403	0.1187	No
13	Stat5a	2397	0.365	0.1066	No
14	Trib1	2415	0.364	0.1155	No
15	Nfkbia	2463	0.363	0.1231	No
16	Ets2	2495	0.361	0.1313	No
17	Rhob	2555	0.354	0.1382	No
18	Cxcl10	2797	0.335	0.1368	No
19	Cd80	2811	0.334	0.1451	No
20	Gem	2965	0.321	0.1471	No
21	Dusp5	3087	0.314	0.1502	No
22	Il23a	3091	0.313	0.1584	No
23	Fosl1	3126	0.312	0.1652	No
24	Ier2	3149	0.310	0.1725	No
25	Plau	3251	0.303	0.1762	No
26	Tnip2	3472	0.292	0.1746	No
27	Hes1	3934	0.271	0.1621	No
28	Egr2	4073	0.267	0.1633	No
29	Jag1	4243	0.256	0.1629	No
30	Pmepa1	4257	0.255	0.1691	No
31	Klf2	4493	0.246	0.1656	No
32	Il6st	4790	0.234	0.1592	No
33	Pnrc1	4894	0.229	0.1609	No
34	Tnf	5557	0.199	0.1379	No
35	Rel	5800	0.188	0.1326	No
36	Slc2a3	5813	0.188	0.1370	No
37	Nfkbie	5871	0.186	0.1395	No
38	Maff	6001	0.181	0.1388	No
39	Pde4b	6021	0.180	0.1428	No
40	Klf6	6070	0.178	0.1454	No
41	Bcl6	6229	0.172	0.1433	No
42	Ccrl2	6433	0.171	0.1391	No
43	Dusp4	6485	0.169	0.1414	No
44	Plek	6669	0.160	0.1379	No
45	Nfat5	6706	0.159	0.1406	No
46	Olr1	6758	0.157	0.1425	No
47	Serpinb8	6865	0.153	0.1421	No
48	Plaur	6892	0.152	0.1450	No
49	Fjx1	6940	0.150	0.1470	No
50	Junb	7003	0.149	0.1483	No
51	Nr4a1	7140	0.143	0.1463	No
52	Ldlr	7141	0.143	0.1500	No
53	Socs3	7152	0.143	0.1534	No
54	Birc3	7180	0.141	0.1560	No
55	Smad3	7189	0.141	0.1594	No
56	Ninj1	7229	0.140	0.1614	No
57	Rnf19b	7619	0.126	0.1482	No
58	Gadd45a	7789	0.121	0.1442	No
59	Fosb	7874	0.118	0.1437	No
60	Per1	7899	0.118	0.1458	No
61	Cflar	8034	0.113	0.1431	No
62	Dennd5a	8398	0.104	0.1304	No
63	Nfe2l2	8560	0.099	0.1261	No
64	Zbtb10	8646	0.096	0.1251	No
65	Jun	8686	0.095	0.1259	No
66	Birc2	8862	0.090	0.1208	No
67	Sod2	9001	0.085	0.1172	No
68	Map2k3	9184	0.081	0.1116	No
69	Il7r	9235	0.080	0.1115	No
70	Zc3h12a	9484	0.073	0.1029	No
71	Cdkn1a	9572	0.071	0.1011	No
72	Sdc4	9610	0.070	0.1014	No
73	Mxd1	9907	0.062	0.0904	No
74	Dram1	9991	0.060	0.0884	No
75	Gpr183	10007	0.059	0.0893	No
76	Yrdc	10201	0.054	0.0825	No
77	Litaf	10294	0.051	0.0800	No
78	Ptpre	10695	0.041	0.0640	No
79	Cebpd	10727	0.041	0.0638	No
80	Ier5	10921	0.036	0.0565	No
81	Nfil3	10954	0.035	0.0560	No
82	Bcl2a1d	11005	0.033	0.0548	No
83	Btg2	11164	0.029	0.0488	No
84	Gch1	11210	0.028	0.0476	No
85	Cd69	11241	0.027	0.0470	No
86	Nfkb1	11319	0.025	0.0444	No
87	B4galt1	11412	0.023	0.0411	No
88	Icosl	11692	0.016	0.0296	No
89	Inhba	11756	0.014	0.0273	No
90	Dusp1	11763	0.014	0.0274	No
91	Slc16a6	11767	0.014	0.0277	No
92	Btg3	12007	0.008	0.0177	No
93	Dnajb4	12166	0.004	0.0110	No
94	Il1b	12347	0.000	0.0034	No
95	Atp2b1	12669	-0.000	-0.0103	No
96	Pdlim5	12884	-0.006	-0.0193	No
97	Klf4	12885	-0.006	-0.0191	No
98	Tnfaip8	12927	-0.007	-0.0207	No
99	Fos	12979	-0.008	-0.0227	No
100	Ifngr2	13136	-0.012	-0.0290	No
101	Tubb2a	13383	-0.018	-0.0390	No
102	Klf10	13978	-0.033	-0.0635	No
103	Tiparp	14138	-0.037	-0.0693	No
104	Ptger4	14449	-0.045	-0.0813	No
105	Rela	14598	-0.049	-0.0863	No
106	Myc	14639	-0.050	-0.0867	No
107	Fosl2	14645	-0.050	-0.0856	No
108	F3	14720	-0.052	-0.0873	No
109	Plpp3	14804	-0.054	-0.0894	No
110	Lamb3	14806	-0.055	-0.0880	No
111	Nr4a2	14846	-0.056	-0.0882	No
112	Dusp2	14943	-0.058	-0.0908	No
113	Tap1	14978	-0.059	-0.0907	No
114	Bcl3	15064	-0.062	-0.0927	No
115	Csf1	15104	-0.063	-0.0927	No
116	Ccnl1	15724	-0.078	-0.1170	No
117	Cd44	15844	-0.081	-0.1199	No
118	Serpinb2	15877	-0.082	-0.1191	No
119	Efna1	16219	-0.093	-0.1312	No
120	Il15ra	16380	-0.096	-0.1355	No
121	Mcl1	16420	-0.097	-0.1346	No
122	Irs2	16596	-0.102	-0.1393	No
123	B4galt5	16743	-0.107	-0.1427	No
124	Pfkfb3	16821	-0.109	-0.1431	No
125	Ppp1r15a	17032	-0.116	-0.1490	No
126	Trip10	17520	-0.132	-0.1663	No
127	Traf1	17597	-0.134	-0.1659	No
128	Ehd1	17873	-0.143	-0.1739	No
129	Klf9	17903	-0.145	-0.1713	No
130	Eif1	18152	-0.153	-0.1778	No
131	Rcan1	18234	-0.156	-0.1771	No
132	Phlda1	18354	-0.161	-0.1779	Yes
133	Snn	18452	-0.165	-0.1777	Yes
134	Map3k8	18551	-0.170	-0.1774	Yes
135	Fut4	18670	-0.175	-0.1778	Yes
136	Gadd45b	18694	-0.176	-0.1741	Yes
137	Ifit2	18737	-0.178	-0.1712	Yes
138	Tnfrsf9	18747	-0.178	-0.1668	Yes
139	Tnfaip2	18785	-0.180	-0.1636	Yes
140	Tnfsf9	18981	-0.188	-0.1669	Yes
141	Atf3	18982	-0.188	-0.1620	Yes
142	Tank	19019	-0.189	-0.1585	Yes
143	Irf1	19108	-0.193	-0.1571	Yes
144	Tnfaip6	19170	-0.196	-0.1545	Yes
145	Ptgs2	19582	-0.214	-0.1664	Yes
146	Clcf1	19593	-0.215	-0.1611	Yes
147	Cebpb	19868	-0.223	-0.1669	Yes
148	Kdm6b	19913	-0.225	-0.1628	Yes
149	Tlr2	20084	-0.233	-0.1639	Yes
150	Tgif1	20112	-0.235	-0.1588	Yes
151	Tnc	20237	-0.244	-0.1577	Yes
152	Kynu	20333	-0.249	-0.1551	Yes
153	Nampt	20549	-0.260	-0.1574	Yes
154	Ifih1	20668	-0.264	-0.1554	Yes
155	Nfkb2	20759	-0.271	-0.1521	Yes
156	Sgk1	20782	-0.273	-0.1458	Yes
157	Btg1	20785	-0.273	-0.1386	Yes
158	Panx1	21065	-0.288	-0.1429	Yes
159	Vegfa	21074	-0.288	-0.1356	Yes
160	Zfp36	21085	-0.290	-0.1283	Yes
161	Bhlhe40	21092	-0.291	-0.1209	Yes
162	Sat1	21105	-0.292	-0.1137	Yes
163	Hbegf	21404	-0.311	-0.1182	Yes
164	Slc2a6	21509	-0.313	-0.1143	Yes
165	Egr1	21800	-0.336	-0.1178	Yes
166	Ripk2	22155	-0.371	-0.1230	Yes
167	Rigi	22431	-0.403	-0.1241	Yes
168	Tsc22d1	22478	-0.410	-0.1152	Yes
169	G0s2	22532	-0.420	-0.1063	Yes
170	Cd83	22614	-0.426	-0.0985	Yes
171	Marcks	22816	-0.459	-0.0949	Yes
172	Icam1	22862	-0.467	-0.0844	Yes
173	Gfpt2	23157	-0.521	-0.0831	Yes
174	Ccl5	23192	-0.533	-0.0704	Yes
175	Id2	23263	-0.556	-0.0587	Yes
176	Abca1	23621	-1.335	-0.0385	Yes
177	Sphk1	23624	-1.457	-0.0000	Yes