DatasetGMP.GMP.mono_Pheno.cls
#Group3_versus_Group4.GMP.mono_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)-0.54380447
Normalized Enrichment Score (NES)-1.6366441
Nominal p-value0.024193548
FDR q-value0.31349322
FWER p-Value0.194
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Trim2110690.495-0.0242No
2Txnip16400.431-0.0300No
3Rtp416500.430-0.0120No
4Procr23410.372-0.0254No
5Cxcl1027970.335-0.0304No
6Gmpr28690.328-0.0193No
7Lap348700.230-0.0945No
8Ccrl264330.171-0.1535No
9Samd9l70230.148-0.1722No
10Cd7478340.120-0.2015No
11Tmem14079680.115-0.2022No
12Stat280270.113-0.1998No
13Lamp386440.096-0.2219No
14Il4ra89000.088-0.2289No
15Ifitm189530.087-0.2274No
16Ifi2792340.080-0.2359No
17Irf296170.070-0.2492No
18Casp899760.060-0.2618No
19Psmb9101650.055-0.2674No
20Cnp108770.037-0.2961No
21Batf2111530.029-0.3065No
22Elf1111570.029-0.3054No
23Wars1113360.025-0.3119No
24Ifi30114560.022-0.3160No
25Nub1118450.012-0.3320No
26Plscr113041-0.010-0.3824No
27Irf713233-0.015-0.3899No
28Casp113553-0.023-0.4024No
29Sell13774-0.028-0.4106No
30Cd4714409-0.044-0.4356No
31Psma314621-0.050-0.4425No
32Tap114978-0.059-0.4551No
33Csf115104-0.063-0.4577No
34Uba715309-0.068-0.4634No
35Ube2l615379-0.069-0.4634No
36Ncoa715638-0.076-0.4711No
37Ly6e15941-0.084-0.4804No
38Adar16177-0.092-0.4864No
39B2m16742-0.107-0.5058No
40Psmb816940-0.113-0.5093No
41Pnpt117232-0.123-0.5165No
42Rnf3117236-0.123-0.5113No
43Mvb12a17709-0.137-0.5255No
44Trim1417842-0.142-0.5250No
45Tent5a18057-0.150-0.5277No
46Slc25a2818118-0.152-0.5237No
47Psme218465-0.166-0.5313No
48Nmi18479-0.166-0.5248No
49Ifit218737-0.178-0.5281No
50Irf119108-0.193-0.5355Yes
51Il1519259-0.200-0.5333Yes
52Ifitm219282-0.201-0.5257Yes
53Trim2619286-0.201-0.5172Yes
54Ifit319573-0.214-0.5202Yes
55Trafd119984-0.228-0.5278Yes
56Psme120138-0.237-0.5242Yes
57Cmtr120176-0.239-0.5155Yes
58Herc620409-0.254-0.5145Yes
59Cmpk220446-0.255-0.5051Yes
60Epsti120664-0.264-0.5030Yes
61Ifih120668-0.264-0.4918Yes
62Lpar620877-0.279-0.4887Yes
63Rsad220906-0.282-0.4778Yes
64Ogfr20913-0.283-0.4659Yes
65Gbp321125-0.293-0.4623Yes
66Dhx5821225-0.300-0.4537Yes
67Il721316-0.306-0.4444Yes
68Trim2521528-0.315-0.4399Yes
69Sp11021617-0.321-0.4299Yes
70Parp1421723-0.330-0.4202Yes
71Eif2ak221870-0.343-0.4117Yes
72Parp1222102-0.365-0.4059Yes
73Isg2022136-0.369-0.3915Yes
74Ripk222155-0.371-0.3764Yes
75Parp922476-0.409-0.3724Yes
76Tdrd722559-0.421-0.3579Yes
77Mov1022639-0.426-0.3430Yes
78Helz222726-0.443-0.3277Yes
79Lgals3bp22940-0.485-0.3160Yes
80Irf922982-0.490-0.2967Yes
81Ifitm322994-0.493-0.2761Yes
82Ifi3523172-0.525-0.2611Yes
83Isg1523239-0.549-0.2404Yes
84Trim12c23422-0.629-0.2212Yes
85Oas1a23449-0.643-0.1948Yes
86Ifi4423475-0.660-0.1675Yes
87Ddx6023477-0.661-0.1393Yes
88Usp1823552-0.745-0.1105Yes
89Bst223555-0.755-0.0783Yes
90Oasl123576-0.803-0.0447Yes
91Mx223614-1.0910.0004Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE