DatasetGMP.GMP.mono_Pheno.cls
#Group3_versus_Group4.GMP.mono_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.29669183
Normalized Enrichment Score (NES)-1.3142884
Nominal p-value0.0524109
FDR q-value0.91662824
FWER p-Value0.757
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Stab181.2570.0340No
2Lif3360.6860.0388No
3Rasgrp13370.6860.0576No
4Msr13450.6820.0759No
5Cd8210380.4990.0600No
6Rtp416500.4300.0457No
7Il1017660.4170.0522No
8Il1817810.4140.0630No
9Osm17890.4140.0740No
10Npffr220590.3870.0731No
11Il2rb23200.3720.0722No
12Adrm124020.3650.0787No
13Nfkbia24630.3630.0860No
14Slc4a425660.3540.0914No
15Pdpn27110.3410.0946No
16Cxcl1027970.3350.1001No
17Rgs129750.3200.1013No
18Il18r130160.3170.1083No
19Osmr33860.2930.1005No
20Cd4036510.2840.0971No
21Timp139290.2710.0927No
22Slc1a241620.2610.0899No
23Rnf144b45160.2450.0816No
24P2rx746500.2410.0825No
25Itgb346830.2390.0876No
26Sema4d48610.2310.0864No
27Nmur149000.2290.0910No
28Fzd550420.2220.0911No
29Best150690.2200.0960No
30Cybb50770.2200.1017No
31Lck53210.2090.0970No
32Lpar153720.2060.1005No
33Nod257850.1890.0881No
34Pde4b60210.1800.0830No
35Klf660700.1780.0858No
36Rhog64300.1710.0752No
37Ccrl264330.1710.0798No
38Olr167580.1570.0703No
39Plaur68920.1520.0688No
40Cx3cl169100.1510.0722No
41Ldlr71410.1430.0663No
42Hpn71630.1420.0693No
43Atp2a277060.1240.0495No
44Tacr379360.1160.0429No
45Slc28a280100.1140.0429No
46Kcnj282140.1080.0373No
47Ros183060.1070.0363No
48Slc31a284070.1040.0349No
49Lamp386440.0960.0274No
50Slc31a186580.0960.0295No
51Icam486890.0950.0308No
52Ebi387730.0920.0298No
53Acvr1b88630.0900.0284No
54Il4ra89000.0880.0293No
55Ifitm189530.0870.0295No
56Gnai389700.0860.0312No
57Csf3r90230.0850.0312No
58Il1r190250.0850.0335No
59Selenos91190.0820.0318No
60Pcdh791360.0810.0333No
61Il7r92350.0800.0313No
62Cdkn1a95720.0710.0189No
63Il18rap96790.0680.0163No
64Ffar298100.0640.0125No
65Kif1b98610.0630.0121No
66Mxd199070.0620.0119No
67Gpr183100070.0590.0093No
68Sri100380.0580.0096No
69Atp2c1102600.0520.0016No
70Ptpre106950.041-0.0158No
71Ifnar1110160.033-0.0285No
72Btg2111640.029-0.0340No
73Gch1112100.028-0.0352No
74Cd69112410.027-0.0357No
75Nfkb1113190.025-0.0383No
76Cxcr6113890.023-0.0406No
77Ptgir113910.023-0.0400No
78Slamf1115100.020-0.0445No
79Tapbp115140.020-0.0441No
80Icosl116920.016-0.0512No
81Abi1117220.015-0.0520No
82Inhba117560.014-0.0531No
83Dcbld2118810.011-0.0580No
84Psen1122320.002-0.0729No
85Itgb8123430.000-0.0776No
86Il1b123470.000-0.0777No
87Chst2123710.000-0.0787No
88Atp2b112669-0.000-0.0914No
89Irak212835-0.005-0.0983No
90Emp313025-0.010-0.1061No
91Ifngr213136-0.012-0.1104No
92Irf713233-0.015-0.1141No
93P2ry213408-0.019-0.1210No
94Sgms213749-0.027-0.1348No
95Sell13774-0.028-0.1350No
96Calcrl13880-0.031-0.1387No
97Ccl2414028-0.035-0.1440No
98Mmp1414092-0.036-0.1457No
99Raf114261-0.040-0.1518No
100Aqp914432-0.044-0.1578No
101Ptger414449-0.045-0.1573No
102Cd4814481-0.046-0.1573No
103Rela14598-0.049-0.1609No
104Myc14639-0.050-0.1613No
105F314720-0.052-0.1633No
106Gabbr114993-0.059-0.1732No
107Slc7a215009-0.060-0.1722No
108Sele15073-0.062-0.1732No
109Csf115104-0.063-0.1728No
110Ccr715131-0.064-0.1722No
111Slc7a115798-0.080-0.1984No
112Gna1515826-0.081-0.1973No
113Tnfrsf1b15925-0.084-0.1992No
114Ly6e15941-0.084-0.1975No
115P2rx415948-0.085-0.1955No
116Itga516041-0.088-0.1970No
117Il15ra16380-0.096-0.2088No
118Mefv17270-0.124-0.2433No
119Hif1a17565-0.134-0.2522No
120Aplnr17660-0.136-0.2525No
121Lyn17980-0.147-0.2621No
122Lcp218111-0.152-0.2635No
123Ptger218302-0.159-0.2672No
124Nmi18479-0.166-0.2702No
125Slc11a218581-0.171-0.2698No
126Tnfrsf918747-0.178-0.2720No
127Tnfsf918981-0.188-0.2768No
128Clec5a19076-0.192-0.2756No
129Irf119108-0.193-0.2716No
130Tnfaip619170-0.196-0.2688No
131Il1519259-0.200-0.2671No
132Ptafr19313-0.202-0.2639No
133Tlr220084-0.233-0.2903Yes
134Pik3r520128-0.236-0.2857Yes
135Kcnmb220233-0.243-0.2835Yes
136Kcna320352-0.250-0.2817Yes
137Nlrp320376-0.252-0.2758Yes
138Nampt20549-0.260-0.2760Yes
139Il10ra20682-0.266-0.2744Yes
140Scn1b20887-0.280-0.2754Yes
141Met20905-0.282-0.2685Yes
142Acvr2a21260-0.302-0.2753Yes
143Gp1ba21325-0.307-0.2696Yes
144Hbegf21404-0.311-0.2644Yes
145Adgre121576-0.319-0.2630Yes
146Pvr21683-0.327-0.2586Yes
147Cmklr121718-0.329-0.2511Yes
148Tnfsf1021859-0.342-0.2477Yes
149Eif2ak221870-0.343-0.2387Yes
150Gpr13221883-0.345-0.2298Yes
151Scarf122151-0.371-0.2311Yes
152Ripk222155-0.371-0.2210Yes
153Tlr122190-0.374-0.2123Yes
154Adora2b22348-0.392-0.2083Yes
155Tlr322404-0.399-0.1997Yes
156Cd1422413-0.399-0.1892Yes
157Rgs1622505-0.415-0.1817Yes
158Ahr22721-0.442-0.1788Yes
159Icam122862-0.467-0.1720Yes
160Hrh122920-0.481-0.1613Yes
161Axl23173-0.525-0.1576Yes
162Ccl523192-0.533-0.1438Yes
163Tnfsf1523360-0.600-0.1346Yes
164Bst223555-0.755-0.1222Yes
165Gpc323566-0.784-0.1012Yes
166Tacr123607-0.997-0.0757Yes
167Abca123621-1.335-0.0397Yes
168Sphk123624-1.457-0.0000Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE