| Dataset | GMP.GMP.mono_Pheno.cls #Group3_versus_Group4.GMP.mono_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | GMP.mono_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_ESTROGEN_RESPONSE_LATE |
| Enrichment Score (ES) | -0.19463626 |
| Normalized Enrichment Score (NES) | -0.96254826 |
| Nominal p-value | 0.5743381 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Ccnd1 | 222 | 0.756 | 0.0170 | No |
| 2 | Clic3 | 453 | 0.642 | 0.0296 | No |
| 3 | Slc1a4 | 858 | 0.535 | 0.0311 | No |
| 4 | Cd9 | 966 | 0.512 | 0.0444 | No |
| 5 | Gale | 1361 | 0.457 | 0.0436 | No |
| 6 | Hr | 1525 | 0.444 | 0.0522 | No |
| 7 | Ovol2 | 2428 | 0.364 | 0.0264 | No |
| 8 | Ugdh | 2569 | 0.354 | 0.0328 | No |
| 9 | Car2 | 2584 | 0.353 | 0.0446 | No |
| 10 | Homer2 | 2730 | 0.340 | 0.0503 | No |
| 11 | Fdft1 | 2752 | 0.339 | 0.0612 | No |
| 12 | Slc2a8 | 2948 | 0.323 | 0.0642 | No |
| 13 | Ptges | 2954 | 0.322 | 0.0753 | No |
| 14 | Kif20a | 3066 | 0.314 | 0.0815 | No |
| 15 | Tpd52l1 | 3067 | 0.314 | 0.0925 | No |
| 16 | Xbp1 | 3224 | 0.304 | 0.0965 | No |
| 17 | Slc22a5 | 3321 | 0.297 | 0.1028 | No |
| 18 | Pgr | 3365 | 0.294 | 0.1113 | No |
| 19 | Gla | 3437 | 0.293 | 0.1185 | No |
| 20 | Perp | 3852 | 0.272 | 0.1103 | No |
| 21 | Scube2 | 3930 | 0.271 | 0.1165 | No |
| 22 | Cxcl12 | 4316 | 0.254 | 0.1090 | No |
| 23 | Flnb | 4391 | 0.252 | 0.1146 | No |
| 24 | Ptger3 | 4393 | 0.252 | 0.1234 | No |
| 25 | Il6st | 4790 | 0.234 | 0.1147 | No |
| 26 | Il17rb | 4881 | 0.230 | 0.1189 | No |
| 27 | Blvrb | 5011 | 0.223 | 0.1212 | No |
| 28 | Tjp3 | 5346 | 0.207 | 0.1142 | No |
| 29 | Add3 | 5814 | 0.188 | 0.1009 | No |
| 30 | Dlg5 | 5981 | 0.182 | 0.1002 | No |
| 31 | S100a9 | 6296 | 0.171 | 0.0928 | No |
| 32 | Farp1 | 6715 | 0.159 | 0.0805 | No |
| 33 | Top2a | 6760 | 0.157 | 0.0841 | No |
| 34 | Slc16a1 | 6774 | 0.156 | 0.0890 | No |
| 35 | Fkbp4 | 6785 | 0.156 | 0.0940 | No |
| 36 | Sema3b | 6979 | 0.150 | 0.0910 | No |
| 37 | Tfpi2 | 7043 | 0.147 | 0.0935 | No |
| 38 | Ppif | 7161 | 0.142 | 0.0935 | No |
| 39 | Aldh3a2 | 7243 | 0.139 | 0.0949 | No |
| 40 | Amfr | 7271 | 0.138 | 0.0986 | No |
| 41 | Dynlt3 | 7651 | 0.125 | 0.0868 | No |
| 42 | Sult2b1 | 7985 | 0.115 | 0.0766 | No |
| 43 | Foxc1 | 8242 | 0.108 | 0.0695 | No |
| 44 | Tspan13 | 8416 | 0.103 | 0.0657 | No |
| 45 | Pdcd4 | 8427 | 0.103 | 0.0689 | No |
| 46 | Stil | 8687 | 0.095 | 0.0612 | No |
| 47 | Scarb1 | 8713 | 0.094 | 0.0634 | No |
| 48 | Ass1 | 8885 | 0.089 | 0.0592 | No |
| 49 | Cdc20 | 9100 | 0.082 | 0.0529 | No |
| 50 | Pkp3 | 9339 | 0.077 | 0.0455 | No |
| 51 | Bcl2 | 9513 | 0.072 | 0.0406 | No |
| 52 | Mapt | 9599 | 0.070 | 0.0395 | No |
| 53 | Atp2b4 | 9611 | 0.070 | 0.0414 | No |
| 54 | Jak1 | 9967 | 0.060 | 0.0284 | No |
| 55 | Nab2 | 10335 | 0.050 | 0.0145 | No |
| 56 | Calcr | 10502 | 0.046 | 0.0091 | No |
| 57 | Plk4 | 10593 | 0.044 | 0.0068 | No |
| 58 | Rps6ka2 | 10640 | 0.043 | 0.0063 | No |
| 59 | Plac1 | 10804 | 0.039 | 0.0007 | No |
| 60 | St14 | 11012 | 0.033 | -0.0070 | No |
| 61 | Xrcc3 | 11386 | 0.023 | -0.0221 | No |
| 62 | Rab31 | 11604 | 0.018 | -0.0307 | No |
| 63 | Car12 | 11658 | 0.017 | -0.0324 | No |
| 64 | Plxnb1 | 11690 | 0.016 | -0.0331 | No |
| 65 | Slc7a5 | 11874 | 0.011 | -0.0405 | No |
| 66 | Cish | 11875 | 0.011 | -0.0402 | No |
| 67 | Rabep1 | 11888 | 0.011 | -0.0403 | No |
| 68 | Btg3 | 12007 | 0.008 | -0.0451 | No |
| 69 | Cav1 | 12013 | 0.008 | -0.0450 | No |
| 70 | Nrip1 | 12124 | 0.005 | -0.0495 | No |
| 71 | Mocs2 | 12223 | 0.002 | -0.0536 | No |
| 72 | Gal | 12342 | 0.000 | -0.0586 | No |
| 73 | Pdlim3 | 12367 | 0.000 | -0.0597 | No |
| 74 | Tst | 12718 | -0.001 | -0.0745 | No |
| 75 | Klf4 | 12885 | -0.006 | -0.0814 | No |
| 76 | Prkar2b | 12928 | -0.007 | -0.0830 | No |
| 77 | Wfs1 | 12953 | -0.008 | -0.0837 | No |
| 78 | Elovl5 | 12961 | -0.008 | -0.0837 | No |
| 79 | Hspa4l | 12975 | -0.008 | -0.0840 | No |
| 80 | Fos | 12979 | -0.008 | -0.0838 | No |
| 81 | Mapk13 | 13058 | -0.011 | -0.0868 | No |
| 82 | Fabp5 | 13108 | -0.012 | -0.0885 | No |
| 83 | Abca3 | 13286 | -0.016 | -0.0955 | No |
| 84 | Abhd2 | 13306 | -0.016 | -0.0957 | No |
| 85 | Nxt1 | 13314 | -0.017 | -0.0954 | No |
| 86 | Ncor2 | 13395 | -0.019 | -0.0982 | No |
| 87 | Jak2 | 13404 | -0.019 | -0.0979 | No |
| 88 | Aff1 | 13490 | -0.021 | -0.1007 | No |
| 89 | Mettl3 | 13563 | -0.023 | -0.1030 | No |
| 90 | Cdh1 | 13699 | -0.026 | -0.1078 | No |
| 91 | Aldh3b1 | 13776 | -0.028 | -0.1101 | No |
| 92 | Idh2 | 13821 | -0.030 | -0.1109 | No |
| 93 | Ckb | 13887 | -0.031 | -0.1126 | No |
| 94 | Gjb3 | 14291 | -0.041 | -0.1284 | No |
| 95 | Large1 | 14435 | -0.044 | -0.1329 | No |
| 96 | Cpe | 14684 | -0.051 | -0.1417 | No |
| 97 | Slc24a3 | 14704 | -0.052 | -0.1407 | No |
| 98 | Dusp2 | 14943 | -0.058 | -0.1488 | No |
| 99 | Tmprss3 | 14961 | -0.059 | -0.1475 | No |
| 100 | Itpk1 | 14980 | -0.059 | -0.1462 | No |
| 101 | Pdzk1 | 15032 | -0.061 | -0.1462 | No |
| 102 | Dnajc1 | 15080 | -0.062 | -0.1461 | No |
| 103 | Myb | 15126 | -0.064 | -0.1458 | No |
| 104 | Dcxr | 15206 | -0.066 | -0.1468 | No |
| 105 | Acox2 | 15586 | -0.075 | -0.1604 | No |
| 106 | Hmgcs2 | 15593 | -0.075 | -0.1580 | No |
| 107 | Pcp4 | 15667 | -0.076 | -0.1585 | No |
| 108 | Cd44 | 15844 | -0.081 | -0.1631 | No |
| 109 | Mdk | 15859 | -0.082 | -0.1609 | No |
| 110 | Opn3 | 16024 | -0.087 | -0.1648 | No |
| 111 | Gfus | 16039 | -0.088 | -0.1624 | No |
| 112 | Rnaseh2a | 16135 | -0.090 | -0.1633 | No |
| 113 | Dhcr7 | 16160 | -0.091 | -0.1611 | No |
| 114 | Ptpn6 | 16230 | -0.093 | -0.1608 | No |
| 115 | Sfn | 16515 | -0.100 | -0.1694 | No |
| 116 | Etfb | 16952 | -0.113 | -0.1840 | No |
| 117 | Fkbp5 | 17007 | -0.115 | -0.1823 | No |
| 118 | Tnnc1 | 17103 | -0.118 | -0.1822 | No |
| 119 | Snx10 | 17104 | -0.118 | -0.1781 | No |
| 120 | Papss2 | 17332 | -0.126 | -0.1834 | No |
| 121 | Cyp26b1 | 17335 | -0.126 | -0.1790 | No |
| 122 | Kcnk5 | 17689 | -0.137 | -0.1893 | Yes |
| 123 | Emp2 | 17705 | -0.137 | -0.1851 | Yes |
| 124 | Rbbp8 | 17864 | -0.143 | -0.1869 | Yes |
| 125 | Fgfr3 | 17882 | -0.144 | -0.1826 | Yes |
| 126 | Igfbp4 | 17922 | -0.145 | -0.1792 | Yes |
| 127 | Sord | 17933 | -0.145 | -0.1745 | Yes |
| 128 | Bag1 | 18072 | -0.151 | -0.1751 | Yes |
| 129 | Gper1 | 18148 | -0.153 | -0.1730 | Yes |
| 130 | Celsr2 | 18453 | -0.165 | -0.1801 | Yes |
| 131 | Tiam1 | 18554 | -0.170 | -0.1785 | Yes |
| 132 | Impa2 | 18690 | -0.176 | -0.1781 | Yes |
| 133 | Myof | 18774 | -0.180 | -0.1753 | Yes |
| 134 | Cox6c | 18869 | -0.184 | -0.1729 | Yes |
| 135 | Ret | 19048 | -0.191 | -0.1738 | Yes |
| 136 | Chst8 | 19387 | -0.206 | -0.1810 | Yes |
| 137 | Mest | 19676 | -0.218 | -0.1857 | Yes |
| 138 | Cdc6 | 19887 | -0.224 | -0.1868 | Yes |
| 139 | Batf | 19993 | -0.229 | -0.1833 | Yes |
| 140 | Slc26a2 | 20187 | -0.240 | -0.1831 | Yes |
| 141 | St6galnac2 | 20383 | -0.252 | -0.1826 | Yes |
| 142 | Plaat3 | 20389 | -0.252 | -0.1740 | Yes |
| 143 | Lsr | 20520 | -0.259 | -0.1705 | Yes |
| 144 | Tob1 | 20608 | -0.261 | -0.1651 | Yes |
| 145 | Llgl2 | 20641 | -0.263 | -0.1573 | Yes |
| 146 | Sgk1 | 20782 | -0.273 | -0.1537 | Yes |
| 147 | Anxa9 | 20799 | -0.274 | -0.1448 | Yes |
| 148 | Arl3 | 20934 | -0.284 | -0.1406 | Yes |
| 149 | Zfp36 | 21085 | -0.290 | -0.1369 | Yes |
| 150 | Dnajc12 | 21089 | -0.290 | -0.1269 | Yes |
| 151 | Cacna2d2 | 21090 | -0.290 | -0.1167 | Yes |
| 152 | Unc13b | 21135 | -0.295 | -0.1083 | Yes |
| 153 | Scnn1a | 21352 | -0.310 | -0.1067 | Yes |
| 154 | Siah2 | 21812 | -0.337 | -0.1145 | Yes |
| 155 | Lamc2 | 21974 | -0.352 | -0.1090 | Yes |
| 156 | Slc29a1 | 21987 | -0.353 | -0.0972 | Yes |
| 157 | Prlr | 21992 | -0.354 | -0.0850 | Yes |
| 158 | Ltf | 22032 | -0.357 | -0.0741 | Yes |
| 159 | Olfm1 | 22122 | -0.368 | -0.0651 | Yes |
| 160 | Isg20 | 22136 | -0.369 | -0.0527 | Yes |
| 161 | Rapgefl1 | 22150 | -0.371 | -0.0403 | Yes |
| 162 | Frk | 22463 | -0.407 | -0.0394 | Yes |
| 163 | Chpt1 | 23194 | -0.534 | -0.0519 | Yes |
| 164 | Id2 | 23263 | -0.556 | -0.0353 | Yes |
| 165 | Gins2 | 23425 | -0.631 | -0.0201 | Yes |
| 166 | Slc27a2 | 23582 | -0.817 | 0.0018 | Yes |

