| Dataset | GMP.GMP.mono_Pheno.cls #Group3_versus_Group4.GMP.mono_Pheno.cls #Group3_versus_Group4_repos |
| Phenotype | GMP.mono_Pheno.cls#Group3_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_DNA_REPAIR |
| Enrichment Score (ES) | -0.19861324 |
| Normalized Enrichment Score (NES) | -0.828578 |
| Nominal p-value | 0.654 |
| FDR q-value | 1.0 |
| FWER p-Value | 1.0 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Tk2 | 489 | 0.634 | 0.0091 | No |
| 2 | Dguok | 1080 | 0.493 | 0.0073 | No |
| 3 | Pold4 | 2241 | 0.375 | -0.0244 | No |
| 4 | Adrm1 | 2402 | 0.365 | -0.0140 | No |
| 5 | Taf1c | 2464 | 0.363 | 0.0006 | No |
| 6 | Poll | 2484 | 0.361 | 0.0168 | No |
| 7 | Taf9 | 2739 | 0.340 | 0.0221 | No |
| 8 | Srsf6 | 2877 | 0.327 | 0.0317 | No |
| 9 | Usp11 | 3236 | 0.303 | 0.0308 | No |
| 10 | Xpc | 4662 | 0.240 | -0.0186 | No |
| 11 | Dgcr8 | 4679 | 0.239 | -0.0079 | No |
| 12 | Ercc3 | 4763 | 0.235 | -0.0004 | No |
| 13 | Gtf2h5 | 5064 | 0.220 | -0.0027 | No |
| 14 | Polr1c | 5332 | 0.208 | -0.0043 | No |
| 15 | Ssrp1 | 5553 | 0.199 | -0.0042 | No |
| 16 | Tarbp2 | 5661 | 0.194 | 0.0004 | No |
| 17 | Nelfb | 5786 | 0.189 | 0.0040 | No |
| 18 | Pde4b | 6021 | 0.180 | 0.0026 | No |
| 19 | Gtf2h3 | 6199 | 0.174 | 0.0032 | No |
| 20 | Cetn2 | 6243 | 0.172 | 0.0095 | No |
| 21 | Vps37b | 6565 | 0.165 | 0.0037 | No |
| 22 | Ercc5 | 6572 | 0.165 | 0.0112 | No |
| 23 | Ncbp2 | 6575 | 0.165 | 0.0189 | No |
| 24 | Rpa3 | 6612 | 0.163 | 0.0251 | No |
| 25 | Nelfcd | 6685 | 0.159 | 0.0295 | No |
| 26 | Stx3 | 6955 | 0.150 | 0.0252 | No |
| 27 | Itpa | 7072 | 0.146 | 0.0271 | No |
| 28 | Taf12 | 7113 | 0.144 | 0.0322 | No |
| 29 | Eif1b | 7119 | 0.144 | 0.0388 | No |
| 30 | Rfc4 | 7179 | 0.141 | 0.0430 | No |
| 31 | Tsg101 | 7930 | 0.117 | 0.0165 | No |
| 32 | Mrpl40 | 8707 | 0.094 | -0.0121 | No |
| 33 | Rad51 | 8752 | 0.093 | -0.0096 | No |
| 34 | Gtf2h1 | 9009 | 0.085 | -0.0165 | No |
| 35 | Ccno | 9176 | 0.081 | -0.0197 | No |
| 36 | Aaas | 9286 | 0.078 | -0.0207 | No |
| 37 | Polr2j | 9306 | 0.078 | -0.0178 | No |
| 38 | Supt5 | 9426 | 0.074 | -0.0194 | No |
| 39 | Hcls1 | 9700 | 0.068 | -0.0278 | No |
| 40 | Rev3l | 9769 | 0.066 | -0.0276 | No |
| 41 | Ell | 9856 | 0.063 | -0.0283 | No |
| 42 | Gtf2b | 9898 | 0.062 | -0.0271 | No |
| 43 | Ercc1 | 10178 | 0.055 | -0.0364 | No |
| 44 | Fen1 | 10267 | 0.052 | -0.0376 | No |
| 45 | Pold1 | 10312 | 0.051 | -0.0371 | No |
| 46 | Rala | 10315 | 0.051 | -0.0348 | No |
| 47 | Zwint | 10568 | 0.045 | -0.0434 | No |
| 48 | Cant1 | 10632 | 0.043 | -0.0441 | No |
| 49 | Smad5 | 10642 | 0.043 | -0.0424 | No |
| 50 | Cox17 | 10648 | 0.043 | -0.0406 | No |
| 51 | Npr2 | 10690 | 0.042 | -0.0404 | No |
| 52 | Ercc8 | 10700 | 0.041 | -0.0388 | No |
| 53 | Mpg | 10710 | 0.041 | -0.0373 | No |
| 54 | Gmpr2 | 10756 | 0.040 | -0.0373 | No |
| 55 | Polr2a | 10917 | 0.036 | -0.0424 | No |
| 56 | Polr2f | 11095 | 0.031 | -0.0485 | No |
| 57 | Pde6g | 11273 | 0.026 | -0.0548 | No |
| 58 | Impdh2 | 11423 | 0.022 | -0.0601 | No |
| 59 | Rfc5 | 11463 | 0.021 | -0.0608 | No |
| 60 | Nudt9 | 11468 | 0.021 | -0.0599 | No |
| 61 | Rrm2b | 11551 | 0.019 | -0.0625 | No |
| 62 | Polr2e | 11555 | 0.019 | -0.0617 | No |
| 63 | Polr2h | 11642 | 0.017 | -0.0646 | No |
| 64 | Cstf3 | 11793 | 0.013 | -0.0704 | No |
| 65 | Arl6ip1 | 11889 | 0.011 | -0.0739 | No |
| 66 | Nt5c3 | 11927 | 0.010 | -0.0750 | No |
| 67 | Clp1 | 12045 | 0.007 | -0.0797 | No |
| 68 | Snapc4 | 12201 | 0.003 | -0.0862 | No |
| 69 | Umps | 12889 | -0.006 | -0.1151 | No |
| 70 | Polr3c | 12898 | -0.006 | -0.1152 | No |
| 71 | Polr2i | 13083 | -0.011 | -0.1225 | No |
| 72 | Polh | 13164 | -0.013 | -0.1253 | No |
| 73 | Rpa2 | 13570 | -0.024 | -0.1414 | No |
| 74 | Ercc4 | 13899 | -0.031 | -0.1539 | No |
| 75 | Sdcbp | 14034 | -0.035 | -0.1580 | No |
| 76 | Gtf2a2 | 14037 | -0.035 | -0.1565 | No |
| 77 | Rad52 | 14340 | -0.042 | -0.1673 | No |
| 78 | Gpx4 | 14710 | -0.052 | -0.1806 | No |
| 79 | Taf10 | 14790 | -0.054 | -0.1814 | No |
| 80 | Pole4 | 14803 | -0.054 | -0.1794 | No |
| 81 | Sf3a3 | 14850 | -0.056 | -0.1787 | No |
| 82 | Sac3d1 | 14959 | -0.059 | -0.1805 | No |
| 83 | Polr3gl | 15092 | -0.062 | -0.1832 | No |
| 84 | Nudt21 | 15455 | -0.071 | -0.1953 | Yes |
| 85 | Pold3 | 15463 | -0.071 | -0.1922 | Yes |
| 86 | Rnmt | 15579 | -0.074 | -0.1936 | Yes |
| 87 | Supt4a | 15632 | -0.076 | -0.1922 | Yes |
| 88 | Pom121 | 15645 | -0.076 | -0.1891 | Yes |
| 89 | Pola2 | 15728 | -0.078 | -0.1890 | Yes |
| 90 | Gtf2f1 | 15788 | -0.080 | -0.1877 | Yes |
| 91 | Trp53 | 15805 | -0.080 | -0.1846 | Yes |
| 92 | Lig1 | 15918 | -0.083 | -0.1854 | Yes |
| 93 | Rae1 | 16045 | -0.088 | -0.1867 | Yes |
| 94 | Nme3 | 16049 | -0.088 | -0.1827 | Yes |
| 95 | Aprt | 16063 | -0.088 | -0.1790 | Yes |
| 96 | Upf3b | 16116 | -0.090 | -0.1770 | Yes |
| 97 | Guk1 | 16340 | -0.094 | -0.1821 | Yes |
| 98 | Polr2k | 16517 | -0.100 | -0.1848 | Yes |
| 99 | Polb | 16671 | -0.104 | -0.1864 | Yes |
| 100 | Dctn4 | 16681 | -0.104 | -0.1819 | Yes |
| 101 | Rbx1 | 16782 | -0.108 | -0.1810 | Yes |
| 102 | Pola1 | 16867 | -0.111 | -0.1794 | Yes |
| 103 | Dut | 17086 | -0.118 | -0.1831 | Yes |
| 104 | Prim1 | 17112 | -0.119 | -0.1786 | Yes |
| 105 | Cda | 17182 | -0.121 | -0.1758 | Yes |
| 106 | Polr1d | 17200 | -0.122 | -0.1708 | Yes |
| 107 | Nt5c | 17211 | -0.122 | -0.1654 | Yes |
| 108 | Rfc2 | 17220 | -0.122 | -0.1600 | Yes |
| 109 | Taf6 | 17246 | -0.123 | -0.1553 | Yes |
| 110 | Gtf3c5 | 17322 | -0.126 | -0.1525 | Yes |
| 111 | Vps28 | 17759 | -0.139 | -0.1645 | Yes |
| 112 | Alyref | 17874 | -0.143 | -0.1626 | Yes |
| 113 | Pcna | 17920 | -0.145 | -0.1577 | Yes |
| 114 | Ada | 17951 | -0.146 | -0.1520 | Yes |
| 115 | Sec61a1 | 18012 | -0.148 | -0.1476 | Yes |
| 116 | Bcap31 | 18430 | -0.164 | -0.1576 | Yes |
| 117 | Ercc2 | 18437 | -0.165 | -0.1501 | Yes |
| 118 | Ddb1 | 18476 | -0.166 | -0.1439 | Yes |
| 119 | Tyms | 18623 | -0.173 | -0.1419 | Yes |
| 120 | Nelfe | 18709 | -0.177 | -0.1372 | Yes |
| 121 | Ddb2 | 18727 | -0.177 | -0.1295 | Yes |
| 122 | Nfx1 | 18952 | -0.186 | -0.1303 | Yes |
| 123 | Rfc3 | 18953 | -0.186 | -0.1215 | Yes |
| 124 | Taf13 | 19128 | -0.194 | -0.1197 | Yes |
| 125 | Ago4 | 19279 | -0.201 | -0.1166 | Yes |
| 126 | Eloa | 20027 | -0.230 | -0.1376 | Yes |
| 127 | Zfp707 | 20051 | -0.232 | -0.1276 | Yes |
| 128 | Polr2c | 20196 | -0.240 | -0.1224 | Yes |
| 129 | Dad1 | 20201 | -0.241 | -0.1112 | Yes |
| 130 | Ak1 | 20253 | -0.244 | -0.1018 | Yes |
| 131 | Snapc5 | 20327 | -0.248 | -0.0932 | Yes |
| 132 | Cmpk2 | 20446 | -0.255 | -0.0862 | Yes |
| 133 | Edf1 | 20640 | -0.263 | -0.0820 | Yes |
| 134 | Surf1 | 20666 | -0.264 | -0.0706 | Yes |
| 135 | Nme4 | 20669 | -0.265 | -0.0581 | Yes |
| 136 | Mpc2 | 20719 | -0.268 | -0.0476 | Yes |
| 137 | Gsdme | 20823 | -0.275 | -0.0390 | Yes |
| 138 | Nme1 | 21538 | -0.316 | -0.0545 | Yes |
| 139 | Polr1h | 21556 | -0.317 | -0.0402 | Yes |
| 140 | Adcy6 | 21818 | -0.338 | -0.0353 | Yes |
| 141 | Brf2 | 22066 | -0.360 | -0.0289 | Yes |
| 142 | Ak3 | 22217 | -0.378 | -0.0174 | Yes |
| 143 | Polr2d | 22510 | -0.416 | -0.0102 | Yes |
| 144 | Polr2g | 22696 | -0.439 | 0.0027 | Yes |
| 145 | Pnp | 23565 | -0.779 | 0.0025 | Yes |

