DatasetGMP.GMP.mono_Pheno.cls
#Group3_versus_Group4.GMP.mono_Pheno.cls
#Group3_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group3_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)-0.19861324
Normalized Enrichment Score (NES)-0.828578
Nominal p-value0.654
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Tk24890.6340.0091No
2Dguok10800.4930.0073No
3Pold422410.375-0.0244No
4Adrm124020.365-0.0140No
5Taf1c24640.3630.0006No
6Poll24840.3610.0168No
7Taf927390.3400.0221No
8Srsf628770.3270.0317No
9Usp1132360.3030.0308No
10Xpc46620.240-0.0186No
11Dgcr846790.239-0.0079No
12Ercc347630.235-0.0004No
13Gtf2h550640.220-0.0027No
14Polr1c53320.208-0.0043No
15Ssrp155530.199-0.0042No
16Tarbp256610.1940.0004No
17Nelfb57860.1890.0040No
18Pde4b60210.1800.0026No
19Gtf2h361990.1740.0032No
20Cetn262430.1720.0095No
21Vps37b65650.1650.0037No
22Ercc565720.1650.0112No
23Ncbp265750.1650.0189No
24Rpa366120.1630.0251No
25Nelfcd66850.1590.0295No
26Stx369550.1500.0252No
27Itpa70720.1460.0271No
28Taf1271130.1440.0322No
29Eif1b71190.1440.0388No
30Rfc471790.1410.0430No
31Tsg10179300.1170.0165No
32Mrpl4087070.094-0.0121No
33Rad5187520.093-0.0096No
34Gtf2h190090.085-0.0165No
35Ccno91760.081-0.0197No
36Aaas92860.078-0.0207No
37Polr2j93060.078-0.0178No
38Supt594260.074-0.0194No
39Hcls197000.068-0.0278No
40Rev3l97690.066-0.0276No
41Ell98560.063-0.0283No
42Gtf2b98980.062-0.0271No
43Ercc1101780.055-0.0364No
44Fen1102670.052-0.0376No
45Pold1103120.051-0.0371No
46Rala103150.051-0.0348No
47Zwint105680.045-0.0434No
48Cant1106320.043-0.0441No
49Smad5106420.043-0.0424No
50Cox17106480.043-0.0406No
51Npr2106900.042-0.0404No
52Ercc8107000.041-0.0388No
53Mpg107100.041-0.0373No
54Gmpr2107560.040-0.0373No
55Polr2a109170.036-0.0424No
56Polr2f110950.031-0.0485No
57Pde6g112730.026-0.0548No
58Impdh2114230.022-0.0601No
59Rfc5114630.021-0.0608No
60Nudt9114680.021-0.0599No
61Rrm2b115510.019-0.0625No
62Polr2e115550.019-0.0617No
63Polr2h116420.017-0.0646No
64Cstf3117930.013-0.0704No
65Arl6ip1118890.011-0.0739No
66Nt5c3119270.010-0.0750No
67Clp1120450.007-0.0797No
68Snapc4122010.003-0.0862No
69Umps12889-0.006-0.1151No
70Polr3c12898-0.006-0.1152No
71Polr2i13083-0.011-0.1225No
72Polh13164-0.013-0.1253No
73Rpa213570-0.024-0.1414No
74Ercc413899-0.031-0.1539No
75Sdcbp14034-0.035-0.1580No
76Gtf2a214037-0.035-0.1565No
77Rad5214340-0.042-0.1673No
78Gpx414710-0.052-0.1806No
79Taf1014790-0.054-0.1814No
80Pole414803-0.054-0.1794No
81Sf3a314850-0.056-0.1787No
82Sac3d114959-0.059-0.1805No
83Polr3gl15092-0.062-0.1832No
84Nudt2115455-0.071-0.1953Yes
85Pold315463-0.071-0.1922Yes
86Rnmt15579-0.074-0.1936Yes
87Supt4a15632-0.076-0.1922Yes
88Pom12115645-0.076-0.1891Yes
89Pola215728-0.078-0.1890Yes
90Gtf2f115788-0.080-0.1877Yes
91Trp5315805-0.080-0.1846Yes
92Lig115918-0.083-0.1854Yes
93Rae116045-0.088-0.1867Yes
94Nme316049-0.088-0.1827Yes
95Aprt16063-0.088-0.1790Yes
96Upf3b16116-0.090-0.1770Yes
97Guk116340-0.094-0.1821Yes
98Polr2k16517-0.100-0.1848Yes
99Polb16671-0.104-0.1864Yes
100Dctn416681-0.104-0.1819Yes
101Rbx116782-0.108-0.1810Yes
102Pola116867-0.111-0.1794Yes
103Dut17086-0.118-0.1831Yes
104Prim117112-0.119-0.1786Yes
105Cda17182-0.121-0.1758Yes
106Polr1d17200-0.122-0.1708Yes
107Nt5c17211-0.122-0.1654Yes
108Rfc217220-0.122-0.1600Yes
109Taf617246-0.123-0.1553Yes
110Gtf3c517322-0.126-0.1525Yes
111Vps2817759-0.139-0.1645Yes
112Alyref17874-0.143-0.1626Yes
113Pcna17920-0.145-0.1577Yes
114Ada17951-0.146-0.1520Yes
115Sec61a118012-0.148-0.1476Yes
116Bcap3118430-0.164-0.1576Yes
117Ercc218437-0.165-0.1501Yes
118Ddb118476-0.166-0.1439Yes
119Tyms18623-0.173-0.1419Yes
120Nelfe18709-0.177-0.1372Yes
121Ddb218727-0.177-0.1295Yes
122Nfx118952-0.186-0.1303Yes
123Rfc318953-0.186-0.1215Yes
124Taf1319128-0.194-0.1197Yes
125Ago419279-0.201-0.1166Yes
126Eloa20027-0.230-0.1376Yes
127Zfp70720051-0.232-0.1276Yes
128Polr2c20196-0.240-0.1224Yes
129Dad120201-0.241-0.1112Yes
130Ak120253-0.244-0.1018Yes
131Snapc520327-0.248-0.0932Yes
132Cmpk220446-0.255-0.0862Yes
133Edf120640-0.263-0.0820Yes
134Surf120666-0.264-0.0706Yes
135Nme420669-0.265-0.0581Yes
136Mpc220719-0.268-0.0476Yes
137Gsdme20823-0.275-0.0390Yes
138Nme121538-0.316-0.0545Yes
139Polr1h21556-0.317-0.0402Yes
140Adcy621818-0.338-0.0353Yes
141Brf222066-0.360-0.0289Yes
142Ak322217-0.378-0.0174Yes
143Polr2d22510-0.416-0.0102Yes
144Polr2g22696-0.4390.0027Yes
145Pnp23565-0.7790.0025Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR