DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.315951
Normalized Enrichment Score (NES)1.4636317
Nominal p-value0.10358566
FDR q-value0.24282362
FWER p-Value0.487
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gla2570.7400.0272Yes
2Ctsc4910.6540.0511Yes
3Cltc9220.5580.0615Yes
4Atp1a113120.5030.0709Yes
5Uso118110.4540.0732Yes
6Copb221310.4300.0818Yes
7Adam1023810.4090.0923Yes
8Lamp225800.3950.1042Yes
9Ap2b126150.3940.1231Yes
10Arf126320.3920.1426Yes
11Tmx126880.3880.1603Yes
12Arcn127320.3860.1784Yes
13Lman132920.3490.1727Yes
14Anp32e36440.3290.1747Yes
15Golga437430.3230.1872Yes
16Ykt641380.3030.1861Yes
17Igf2r41410.3020.2016Yes
18Dst42840.2940.2107Yes
19M6pr44910.2860.2166Yes
20Atp6v1h45200.2840.2301Yes
21Cope47650.2720.2337Yes
22Arfgef249140.2650.2411Yes
23Ap2m149380.2630.2536Yes
24Copb150770.2560.2609Yes
25Bnip351630.2510.2703Yes
26Cln552370.2470.2799Yes
27Stx1655590.2310.2782Yes
28Ap1g157930.2250.2799Yes
29Tpd5259910.2150.2826Yes
30Zw1061180.2080.2880Yes
31Mon261630.2060.2968Yes
32Sec31a61820.2060.3066Yes
33Scamp166970.1880.2944Yes
34Arfip167720.1850.3008Yes
35Galc68470.1820.3070Yes
36Sec22b68570.1810.3160Yes
37Kif1b71810.1680.3109No
38Snx275570.1520.3028No
39Cog277730.1430.3010No
40Tmed1080060.1330.2980No
41Atp6v1b180150.1330.3045No
42Sec24d80550.1320.3097No
43Sspn82790.1240.3066No
44Tspan886350.1170.2975No
45Egfr87930.1110.2965No
46Snap2388050.1100.3017No
47Mapk188270.1090.3065No
48Dnm1l90580.1010.3019No
49Ap3b190630.1010.3070No
50Scamp390920.1000.3109No
51Yipf692110.0950.3108No
52Clcn393500.0900.3096No
53Ppt198380.0720.2926No
54Cav298900.0700.2940No
55Rab5a99520.0680.2949No
56Rab14101850.0600.2882No
57Vps4b102600.0570.2880No
58Rab9103530.0540.2868No
59Rab2a104640.0500.2847No
60Arfgef1107080.0420.2766No
61Gosr2111310.0280.2601No
62Vamp4113590.0200.2515No
63Stx12113650.0200.2522No
64Napg115750.0120.2440No
65Atp7a116620.0090.2408No
66Rab22a117600.0060.2370No
67Stam117640.0060.2371No
68Pam119030.0010.2314No
69Gbf112238-0.0070.2175No
70Stx712624-0.0200.2022No
71Rps6ka312932-0.0310.1907No
72Clta13111-0.0370.1851No
73Vamp313526-0.0520.1702No
74Ap3s114332-0.0800.1401No
75Sh3gl214346-0.0800.1437No
76Rer114414-0.0830.1451No
77Sod115144-0.1110.1199No
78Krt1815240-0.1140.1217No
79Arfgap315307-0.1170.1249No
80Tom1l116113-0.1460.0982No
81Ap2s116503-0.1600.0899No
82Bet116644-0.1670.0926No
83Tsg10116684-0.1690.0996No
84Napa17433-0.1950.0779No
85Ergic319066-0.2640.0221No
86Dop1a19414-0.2790.0218No
87Gnas19633-0.2900.0275No
88Vps4519801-0.3010.0359No
89Scrn119831-0.3030.0502No
90Ica119832-0.3030.0658No
91Abca120184-0.3180.0673No
92Ocrl21005-0.3700.0515No
93Sgms122111-0.4580.0282No
94Cd6323377-0.7000.0105No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION