DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_PI3K_AKT_MTOR_SIGNALING
Enrichment Score (ES)0.2802652
Normalized Enrichment Score (NES)1.2587402
Nominal p-value0.20162933
FDR q-value0.5875996
FWER p-Value0.812
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Akt13680.6900.0167Yes
2Hsp90b14360.6710.0453Yes
3Calr8080.5740.0564Yes
4Cltc9220.5580.0778Yes
5Actr214200.4930.0798Yes
6Prkar2a14610.4890.1010Yes
7Myd8815360.4800.1204Yes
8Traf218000.4550.1305Yes
9Cdkn1b21300.4300.1367Yes
10Akt1s124400.4050.1426Yes
11Arf126320.3920.1528Yes
12Pitx228290.3820.1624Yes
13Cdk128680.3790.1786Yes
14Ngf34880.3380.1681Yes
15Il2rg36160.3310.1782Yes
16Pikfyve36400.3290.1926Yes
17Atf141550.3010.1849Yes
18Mapkap146120.2810.1787Yes
19Map2k348640.2670.1806Yes
20Lck49090.2650.1911Yes
21Ap2m149380.2630.2023Yes
22Ralb50590.2560.2092Yes
23Plcg150650.2560.2210Yes
24Rit151040.2540.2313Yes
25Camk451100.2540.2430Yes
26Sqstm151960.2490.2510Yes
27Cab3952850.2450.2588Yes
28Actr352970.2440.2698Yes
29Trib353190.2430.2803Yes
30Smad259580.2170.2633No
31Gsk3b64150.1980.2532No
32Eif4e64190.1980.2624No
33Nod164920.1950.2685No
34Ube2n69270.1780.2584No
35Pten69980.1750.2636No
36Prkag170660.1720.2688No
37Ppp2r1b72110.1670.2705No
38Ube2d374560.1560.2675No
39Arpc374830.1550.2736No
40Grb276780.1470.2723No
41Tsc277560.1430.2757No
42Stat280720.1320.2685No
43Raf184780.1230.2571No
44Gna1487530.1120.2507No
45Egfr87930.1110.2542No
46Mapk188270.1090.2579No
47Nck188940.1070.2601No
48Ptpn1190240.1020.2595No
49Pak490820.1000.2617No
50Map3k792230.0940.2602No
51Pin192890.0920.2618No
52Hras93400.0900.2639No
53Mknk295050.0850.2609No
54Prkcb99590.0680.2448No
55Ywhab101630.0610.2390No
56Plcb1101820.0600.2411No
57Csnk2b102290.0580.2419No
58Ddit3104020.0520.2370No
59Rac1104960.0490.2353No
60Mknk1107030.0420.2285No
61Mapk9111700.0270.2100No
62Pla2g12a113670.0190.2025No
63Sla12253-0.0070.1653No
64Cdkn1a12342-0.0110.1620No
65Mapk1012918-0.0300.1390No
66Rps6ka312932-0.0310.1399No
67Irak413109-0.0370.1342No
68Ripk113119-0.0370.1355No
69Rps6ka113179-0.0400.1349No
70Pdk113325-0.0450.1308No
71Tbk113551-0.0530.1238No
72Mapk813899-0.0640.1120No
73Cdk413966-0.0670.1124No
74Rptor14000-0.0680.1142No
75Ecsit14376-0.0820.1021No
76Arhgdia14998-0.1050.0806No
77Slc2a115129-0.1100.0802No
78Map2k615407-0.1200.0741No
79Tnfrsf1a15451-0.1220.0780No
80Adcy215593-0.1280.0780No
81Pik3r315730-0.1320.0784No
82Cab39l15826-0.1360.0807No
83Cdk217064-0.1830.0367No
84Ppp1ca17438-0.1950.0300No
85Vav317508-0.1970.0363No
86Grk217580-0.2000.0427No
87Tiam117744-0.2060.0454No
88Them417790-0.2080.0533No
89Acaca18171-0.2220.0475No
90Fgf2218181-0.2230.0576No
91Cfl118401-0.2330.0592No
92Dusp318659-0.2440.0597No
93Cxcr419016-0.2610.0569No
94Sfn19500-0.2840.0496No
95Il419754-0.2980.0528No
96E2f120169-0.3170.0501No
97Pfn120629-0.3450.0467No
98Nfkbib20867-0.3610.0536No
99Prkaa221690-0.4230.0385No
100Itpr222052-0.4530.0443No
101Dapp122304-0.4790.0561No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PI3K_AKT_MTOR_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PI3K_AKT_MTOR_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PI3K_AKT_MTOR_SIGNALING