DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_P53_PATHWAY
Enrichment Score (ES)-0.20174508
Normalized Enrichment Score (NES)-0.8836221
Nominal p-value0.626327
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_P53_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hexim1241.0300.0195No
2Stom1090.8380.0327No
3Plk21610.7940.0464No
4Osgin12800.7320.0560No
5Hmox16260.6100.0534No
6Slc7a118290.5690.0562No
7H1f28460.5670.0668No
8Zmat38600.5650.0775No
9Gadd45a11940.5190.0737No
10Tax1bp313080.5030.0789No
11Ccp11014690.4880.0818No
12Apaf114720.4880.0915No
13Fos14970.4840.1001No
14Tgfa16310.4680.1038No
15Nudt1518690.4510.1027No
16Gls221390.4300.0998No
17App21530.4280.1078No
18Tchh21790.4260.1152No
19Slc3a222050.4230.1226No
20Nupr122930.4160.1272No
21Cdkn2a24310.4060.1295No
22Trp6325670.3960.1316No
23Jun27210.3870.1328No
24Slc35d129220.3750.1318No
25Retsat31110.3610.1310No
26S100a1031410.3590.1369No
27Zfp36l132710.3510.1384No
28Lif33430.3460.1423No
29Pmm133720.3450.1480No
30H2ac2534190.3410.1529No
31Ctsd35530.3350.1539No
32Plxnb235720.3340.1598No
33Tspyl235830.3330.1660No
34Sertad336620.3280.1692No
35Hspa4l40720.3070.1579No
36Tpd52l141600.3010.1602No
37Ifi3042750.2940.1612No
38Cd8243070.2930.1657No
39Perp43960.2890.1677No
40Klf445240.2830.1680No
41Aen46600.2780.1678No
42Txnip46940.2760.1719No
43Elp147680.2720.1742No
44Ier549560.2620.1714No
45Rhbdf250030.2600.1747No
46Polh51420.2520.1738No
47Foxo351530.2520.1784No
48Sdc152030.2480.1813No
49Trib353190.2430.1812No
50Plk355950.2290.1741No
51Fdxr59100.2190.1651No
52Abat61020.2090.1611No
53Itgb462450.2030.1591No
54Procr67460.1860.1415No
55Ip6k267670.1850.1443No
56Rad51c70370.1730.1363No
57Rnf19b70910.1710.1374No
58Ninj171480.1690.1384No
59Acvr1b72210.1660.1386No
60Fas73010.1630.1385No
61Rap2b76900.1460.1249No
62Sp176960.1460.1276No
63Ak177720.1430.1272No
64Fbxw778680.1390.1260No
65Mapkapk381200.1300.1179No
66Ccng182300.1250.1157No
67Bax82400.1250.1178No
68Rab40c82620.1240.1194No
69Csrnp284950.1230.1120No
70Pcna89800.1040.0934No
71Vwa5a92670.0930.0830No
72Ercc592840.0930.0842No
73Hras93400.0900.0837No
74Mknk295050.0850.0784No
75Xpc95590.0830.0777No
76Rps27l96140.0810.0770No
77Fam162a96830.0780.0757No
78S100a498360.0720.0707No
79Ddit498510.0710.0715No
80Klk899000.0700.0708No
81Tob1100850.0630.0642No
82Rxra103320.0550.0548No
83Casp1103420.0540.0555No
84Ddit3104020.0520.0541No
85Cdk5r1106360.0440.0450No
86Ier3107370.0410.0415No
87Sat1107970.0390.0398No
88Traf4112530.0240.0209No
89Tnni1115450.0130.0087No
90Ppm1d116940.0080.0025No
91Nol8117050.0080.0023No
92Pvt1117510.0060.0005No
93Ppp1r15a118870.002-0.0052No
94Cd81118980.001-0.0056No
95Ctsf12109-0.002-0.0146No
96Mdm212265-0.008-0.0210No
97Atf312314-0.010-0.0229No
98Cdkn1a12342-0.011-0.0238No
99Zfp36512352-0.011-0.0240No
100Ddb212368-0.012-0.0244No
101Blcap12699-0.023-0.0380No
102Rb112976-0.033-0.0491No
103Wwp113068-0.036-0.0523No
104Steap313134-0.038-0.0543No
105Prmt213286-0.044-0.0599No
106Fuca113408-0.048-0.0641No
107Tcn213614-0.055-0.0717No
108Ei2413820-0.062-0.0792No
109Btg113869-0.063-0.0800No
110Ephx113970-0.067-0.0829No
111Ada14119-0.072-0.0878No
112Cyfip214135-0.072-0.0870No
113Rps1214286-0.078-0.0918No
114Tap114358-0.081-0.0933No
115H2aj14515-0.087-0.0982No
116Irag214569-0.089-0.0986No
117Abcc514596-0.090-0.0980No
118Fgf1314747-0.095-0.1024No
119Btg214863-0.099-0.1054No
120Ccnk14943-0.103-0.1067No
121Dnttip214984-0.104-0.1063No
122Prkab115058-0.107-0.1073No
123Rad9a15302-0.117-0.1153No
124Rpl3615655-0.129-0.1278No
125Tm7sf315962-0.141-0.1380No
126Sesn115986-0.142-0.1362No
127Dram116022-0.143-0.1348No
128Baiap216064-0.144-0.1337No
129Trp5316102-0.145-0.1324No
130Sec61a116130-0.147-0.1306No
131Hdac316223-0.150-0.1315No
132Ptpn1416272-0.152-0.1305No
133Trafd116508-0.160-0.1374No
134Phlda316530-0.162-0.1350No
135Triap116745-0.171-0.1407No
136Slc19a216749-0.171-0.1375No
137Epha216796-0.172-0.1360No
138Clca216803-0.173-0.1328No
139Cdh1316922-0.178-0.1343No
140Kif13b17015-0.181-0.1346No
141Ccnd217240-0.187-0.1404No
142Cebpa17422-0.194-0.1442No
143Rrad17647-0.203-0.1497No
144Ldhb17773-0.207-0.1509No
145Ralgds18456-0.236-0.1753No
146Jag218467-0.236-0.1710No
147Bak118534-0.238-0.1691No
148Rpl1818559-0.239-0.1653No
149Rack118638-0.243-0.1638No
150Alox818685-0.245-0.1609No
151Dgka19129-0.267-0.1745No
152Rrp819179-0.270-0.1712No
153Ankra219423-0.280-0.1760No
154Rchy119491-0.283-0.1732No
155Sfn19500-0.284-0.1678No
156Vdr19970-0.309-0.1817No
157Coq8a20193-0.319-0.1848No
158Hint120513-0.337-0.1917No
159Pom12120750-0.353-0.1947Yes
160Def620773-0.355-0.1885Yes
161Mxd120975-0.368-0.1898Yes
162Ccnd321072-0.374-0.1864Yes
163Tgfb121120-0.378-0.1809Yes
164Cdkn2aip21206-0.384-0.1768Yes
165Ndrg121313-0.392-0.1735Yes
166Ptpre21355-0.395-0.1674Yes
167Dcxr21591-0.413-0.1691Yes
168Abhd422000-0.447-0.1776Yes
169Pidd122081-0.456-0.1719Yes
170Notch122095-0.457-0.1634Yes
171Eps8l222147-0.461-0.1563Yes
172Hbegf22162-0.462-0.1477Yes
173Gm2a22184-0.464-0.1393Yes
174Tprkb22270-0.475-0.1335Yes
175Wrap7322273-0.475-0.1241Yes
176Pdgfa22322-0.481-0.1165Yes
177Cgrrf122345-0.483-0.1078Yes
178Irak122356-0.484-0.0986Yes
179Pitpnc122509-0.502-0.0950Yes
180Mxd422739-0.534-0.0941Yes
181Iscu22802-0.543-0.0859Yes
182Socs122945-0.569-0.0806Yes
183St1423127-0.616-0.0760Yes
184Vamp823154-0.622-0.0647Yes
185Rgs1623156-0.623-0.0523Yes
186Zbtb1623243-0.652-0.0430Yes
187Tsc22d123287-0.667-0.0315Yes
188F2r23363-0.694-0.0208Yes
189Tnfsf923435-0.736-0.0092Yes
190Sphk123549-0.8600.0032Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_P53_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_P53_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_P53_PATHWAY