DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.16282949
Normalized Enrichment Score (NES)-0.61362296
Nominal p-value0.80040324
FDR q-value0.93694806
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspa91740.7860.0145No
2Atp6v1c18520.5670.0015No
3Dld9230.5570.0140No
4Pdha110710.5350.0227No
5Atp6v0c10790.5330.0373No
6Pmpca14760.4870.0340No
7Vdac115240.4820.0454No
8Gpi115440.4790.0580No
9Dlat23790.4090.0338No
10Lrpprc25450.3980.0379No
11Retsat31110.3610.0239No
12Oat31490.3590.0323No
13Idh3a31650.3580.0417No
14Eci132640.3520.0473No
15Got232820.3510.0564No
16Hccs35960.3320.0523No
17Sucla237530.3230.0546No
18Ndufs140140.3080.0522No
19Mrpl1141220.3040.0561No
20Atp6v1h45200.2840.0470No
21Mtrr46580.2790.0490No
22Tomm70a47640.2720.0521No
23Aco248290.2690.0569No
24Dlst49600.2620.0586No
25Acadsb50660.2560.0613No
26Uqcrq51790.2500.0635No
27Uqcr1152930.2440.0655No
28Slc25a1154080.2380.0673No
29Ndufa457560.2280.0589No
30Timm17a59130.2190.0583No
31Afg3l259350.2180.0635No
32Supv3l160690.2110.0637No
33Glud161110.2090.0678No
34Mtrf161440.2070.0722No
35Ndufs863880.2000.0674No
36Idh165380.1930.0665No
37Atp6v1f68590.1810.0579No
38Immt70550.1720.0544No
39Cox7a2l72780.1640.0495No
40Sdhd72810.1640.0540No
41Mrps3074440.1570.0514No
42Opa175360.1530.0518No
43Pdhx77870.1420.0451No
44Uqcr1078030.1420.0484No
45Polr2f78850.1390.0488No
46Ndufa179260.1370.0510No
47Mdh280580.1320.0491No
48Vdac381900.1270.0470No
49Ndufs282110.1260.0497No
50Bax82400.1250.0520No
51Nqo287190.1140.0348No
52Mfn287720.1110.0357No
53Bdh290330.1020.0274No
54Atp6v1e190380.1020.0301No
55Timm8b91440.0980.0283No
56Ldha91500.0980.0309No
57Timm1091650.0970.0330No
58Ndufa891790.0970.0351No
59Cox7b92900.0920.0330No
60Ndufb292950.0920.0354No
61Mrpl1593540.0900.0354No
62Etfdh94440.0870.0341No
63Cs96240.0800.0287No
64Cox1096780.0780.0286No
65Mdh198430.0720.0236No
66Atp6v0e101060.0630.0142No
67Ndufb3103090.0560.0071No
68Cox17104060.0520.0045No
69Acadm104630.0500.0035No
70Alas1104800.0500.0042No
71Grpel1105000.0490.0047No
72Timm13106660.043-0.0011No
73Ndufs6106930.042-0.0010No
74Tcirg1108280.038-0.0057No
75Oxa1l110400.030-0.0139No
76Ogdh111480.028-0.0176No
77Uqcrfs1113290.021-0.0247No
78Ndufa9113720.019-0.0260No
79Maob114400.017-0.0284No
80Ndufv1114450.017-0.0281No
81Slc25a5116070.011-0.0346No
82Ndufa5116190.010-0.0348No
83Mrpl35116250.010-0.0348No
84Hadha116480.009-0.0354No
85Aldh6a1117400.007-0.0391No
86Gpx412085-0.001-0.0538No
87Cyb5a12118-0.003-0.0551No
88Ndufs412187-0.005-0.0578No
89Pdhb12237-0.007-0.0597No
90Cox4i112256-0.008-0.0603No
91Uqcrc112336-0.011-0.0633No
92Sdha12344-0.011-0.0633No
93Ndufc212458-0.015-0.0677No
94Uqcrh12487-0.016-0.0685No
95Abcb712673-0.022-0.0758No
96Cox1512843-0.028-0.0822No
97Suclg112949-0.032-0.0858No
98Aifm113062-0.035-0.0896No
99Rhot113475-0.051-0.1057No
100Ndufb613497-0.051-0.1052No
101Etfb13580-0.054-0.1072No
102Ech113648-0.057-0.1085No
103Sdhb13682-0.058-0.1082No
104Mpc113983-0.068-0.1192No
105Tomm2214237-0.076-0.1278No
106Mrps2214269-0.078-0.1270No
107Sdhc14369-0.081-0.1289No
108Slc25a1214383-0.082-0.1272No
109Idh214522-0.088-0.1306No
110Por14533-0.088-0.1286No
111Cyc114552-0.089-0.1269No
112Mrps1114587-0.090-0.1258No
113Ndufb514599-0.090-0.1238No
114Idh3b14925-0.102-0.1348No
115Htra215271-0.115-0.1463No
116Acaa1a15294-0.117-0.1440No
117Nnt15318-0.117-0.1417No
118Cox6c15443-0.122-0.1436No
119Uqcrc215896-0.138-0.1590Yes
120Acat115925-0.139-0.1563Yes
121Ndufab115944-0.140-0.1531Yes
122Cox7c16009-0.142-0.1519Yes
123Ndufv216076-0.144-0.1507Yes
124Mtx216100-0.145-0.1476Yes
125Rhot216128-0.147-0.1447Yes
126Cox7a216265-0.152-0.1462Yes
127Atp6v1g116279-0.152-0.1426Yes
128Vdac216288-0.152-0.1386Yes
129Mgst316347-0.154-0.1368Yes
130Ndufa716359-0.154-0.1330Yes
131Atp5pb16509-0.161-0.1348Yes
132Acaa216539-0.162-0.1316Yes
133Mrps1216739-0.171-0.1353Yes
134Ndufc116779-0.172-0.1321Yes
135Slc25a417041-0.183-0.1382Yes
136Pdp117044-0.183-0.1332Yes
137Uqcrb17069-0.184-0.1291Yes
138Ndufs317265-0.188-0.1321Yes
139Decr117345-0.191-0.1302Yes
140Cox6b117416-0.193-0.1277Yes
141Cox6a117446-0.195-0.1235Yes
142Ldhb17773-0.207-0.1316Yes
143Cox1118227-0.225-0.1447Yes
144Prdx318364-0.232-0.1440Yes
145Etfa18490-0.237-0.1427Yes
146Cpt1a18678-0.244-0.1439Yes
147Ndufs718710-0.246-0.1383Yes
148Slc25a318807-0.251-0.1354Yes
149Mrpl3418960-0.257-0.1347Yes
150Atp6v0b18992-0.259-0.1288Yes
151Echs119060-0.264-0.1243Yes
152Ndufb719072-0.264-0.1174Yes
153Timm5019288-0.275-0.1189Yes
154Timm919510-0.284-0.1204Yes
155Acadvl19513-0.284-0.1125Yes
156Cox5b19515-0.284-0.1047Yes
157Fh119727-0.296-0.1054Yes
158Mrps1519774-0.299-0.0990Yes
159Atp6ap119945-0.309-0.0976Yes
160Hadhb20110-0.313-0.0959Yes
161Cox5a20213-0.320-0.0913Yes
162Slc25a2020866-0.360-0.1091Yes
163Casp720915-0.363-0.1010Yes
164Phb221076-0.375-0.0973Yes
165Atp1b121116-0.377-0.0885Yes
166Hsd17b1021237-0.387-0.0828Yes
167Ndufa621245-0.387-0.0723Yes
168Ndufa221252-0.388-0.0617Yes
169Fxn21257-0.388-0.0511Yes
170Ndufa321262-0.389-0.0404Yes
171Atp6v1d21285-0.390-0.0305Yes
172Cox8a21566-0.412-0.0309Yes
173Idh3g21686-0.423-0.0242Yes
174Phyh21689-0.423-0.0125Yes
175Ndufb822163-0.462-0.0197Yes
176Bckdha22461-0.495-0.0186Yes
177Surf122754-0.537-0.0160Yes
178Iscu22802-0.543-0.0029Yes
179Fdx122952-0.5740.0068Yes
180Cyb5r323493-0.7820.0056Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION