DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INTERFERON_GAMMA_RESPONSE
Enrichment Score (ES)-0.21258049
Normalized Enrichment Score (NES)-0.8605071
Nominal p-value0.620229
FDR q-value0.99628055
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cd861570.8020.0121No
2Fcgr12990.7240.0231No
3Ido14730.6570.0311No
4Cxcl107210.5900.0344No
5Trim219380.5560.0383No
6Pim110250.5410.0473No
7Myd8815360.4800.0368No
8Pfkp17740.4580.0374No
9Znfx119730.4410.0393No
10Mthfd220450.4370.0466No
11Tnfaip321420.4290.0525No
12Nup9322300.4220.0587No
13Selp22320.4220.0686No
14Itgb723850.4090.0717No
15Lap326670.3910.0688No
16Il4ra27420.3860.0747No
17Cd3834180.3420.0540No
18Socs334630.3400.0600No
19Serping136760.3280.0587No
20Ptpn142510.2960.0412No
21Cd6942650.2950.0475No
22Ifi3042750.2940.0541No
23Il18bp42980.2930.0600No
24Stat346500.2790.0516No
25Parp1446920.2760.0563No
26Txnip46940.2760.0627No
27Plscr151290.2530.0502No
28Ncoa352010.2490.0530No
29Sppl2a52920.2450.0549No
30Jak253120.2430.0598No
31Rtp453170.2430.0653No
32Cd7453640.2410.0690No
33Irf755600.2310.0661No
34Il2rb56270.2290.0686No
35Pla2g4a58890.2200.0627No
36Ifih159020.2200.0673No
37Fgl260040.2150.0680No
38Nampt61790.2060.0654No
39Samd9l63110.2010.0646No
40Sod264510.1970.0633No
41Nod164920.1950.0661No
42Icam167690.1850.0587No
43Fas73010.1630.0399No
44Arl4a73060.1630.0435No
45Pnpt173200.1620.0468No
46Zbp173300.1620.0502No
47Isoc173450.1610.0534No
48Casp474280.1580.0536No
49Parp1275160.1530.0535No
50Psma275280.1530.0566No
51Trim2576410.1480.0553No
52Il15ra79940.1340.0434No
53Stat280720.1320.0432No
54Sspn82790.1240.0374No
55Irf185860.1180.0271No
56Ptgs286500.1160.0271No
57Bpgm87330.1130.0263No
58Gbp389960.1030.0175No
59Rnf21392380.0940.0095No
60Hif1a94750.0860.0014No
61Lysmd296490.079-0.0041No
62Wars199490.068-0.0153No
63Cmtr1102680.057-0.0275No
64Casp1103420.054-0.0293No
65Psmb2109430.034-0.0541No
66Mvp109470.034-0.0535No
67Ptpn2110930.029-0.0589No
68Eif2ak2111550.027-0.0609No
69Ogfr111680.027-0.0608No
70Adar112510.024-0.0637No
71Ciita113280.021-0.0665No
72Psmb10114560.017-0.0715No
73Samhd1114720.016-0.0718No
74Cfb117320.007-0.0827No
75Ifitm212252-0.007-0.1046No
76Cd4012327-0.010-0.1075No
77Cdkn1a12342-0.011-0.1079No
78Nlrc512355-0.011-0.1081No
79Oas212528-0.017-0.1151No
80St8sia412695-0.023-0.1216No
81Peli112762-0.025-0.1238No
82Ifit213080-0.036-0.1365No
83Tnfaip613087-0.036-0.1359No
84Ripk113119-0.037-0.1363No
85Tapbp13171-0.039-0.1376No
86Nfkbia13235-0.042-0.1393No
87Helz213584-0.054-0.1529No
88Irf413751-0.059-0.1586No
89Casp313810-0.061-0.1596No
90Btg113869-0.063-0.1606No
91Il714078-0.070-0.1678No
92Psma314189-0.075-0.1708No
93Ptpn614299-0.079-0.1735No
94Vamp514300-0.079-0.1717No
95Tap114358-0.081-0.1722No
96Casp814559-0.089-0.1787No
97Vcam114734-0.095-0.1839No
98Arid5b14758-0.096-0.1826No
99Rapgef614799-0.097-0.1820No
100Psme215076-0.107-0.1913No
101Rnf3115425-0.121-0.2033No
102Slamf715541-0.125-0.2052No
103Slc25a2815545-0.126-0.2024No
104Tnfaip215652-0.129-0.2039No
105Tor1b15728-0.132-0.2040No
106Tdrd715840-0.136-0.2056No
107Ifit315859-0.137-0.2031No
108Cfh15928-0.140-0.2027No
109Irf916052-0.144-0.2046No
110Trim2616075-0.144-0.2022No
111Lcp216112-0.146-0.2003No
112P2ry1416236-0.151-0.2020No
113Stat116349-0.154-0.2032No
114Trafd116508-0.160-0.2061No
115Irf516611-0.166-0.2066No
116Lats216744-0.171-0.2082No
117Ifi4416847-0.174-0.2085Yes
118Irf216906-0.177-0.2068Yes
119Herc616927-0.179-0.2035Yes
120Cmklr116981-0.180-0.2015Yes
121Rsad217189-0.186-0.2060Yes
122Sri17319-0.190-0.2070Yes
123St3gal517375-0.192-0.2048Yes
124Isg1517495-0.197-0.2053Yes
125B2m17524-0.198-0.2018Yes
126Oas317592-0.201-0.2000Yes
127Nmi17624-0.202-0.1966Yes
128Cmpk217837-0.211-0.2007Yes
129Ifi2717879-0.212-0.1974Yes
130Nfkb117895-0.213-0.1931Yes
131Ifitm318018-0.217-0.1932Yes
132Sp11018128-0.221-0.1927Yes
133Rbck118257-0.227-0.1928Yes
134Psmb818290-0.228-0.1888Yes
135Rigi18303-0.229-0.1839Yes
136Ube2l618322-0.230-0.1793Yes
137Irf818399-0.233-0.1771Yes
138Gch118734-0.248-0.1855Yes
139Oasl118889-0.254-0.1861Yes
140Psme119118-0.267-0.1896Yes
141Psmb919392-0.279-0.1947Yes
142Ripk219696-0.294-0.2007Yes
143Pde4b19697-0.294-0.1938Yes
144Il1519802-0.301-0.1912Yes
145Eif4e319996-0.310-0.1922Yes
146Tnfsf1019999-0.310-0.1850Yes
147Il10ra20287-0.324-0.1896Yes
148Sectm1a20450-0.333-0.1887Yes
149Pml20661-0.347-0.1895Yes
150Ly6e20897-0.362-0.1911Yes
151Casp720915-0.363-0.1833Yes
152Trim1420937-0.365-0.1756Yes
153Marchf120968-0.367-0.1683Yes
154Epsti120996-0.369-0.1608Yes
155Auts221004-0.369-0.1524Yes
156Ccl521030-0.372-0.1447Yes
157Dhx5821136-0.379-0.1403Yes
158Gpr1821229-0.386-0.1352Yes
159Mx221511-0.407-0.1376Yes
160Ddx6021572-0.412-0.1305Yes
161Bank121748-0.428-0.1279Yes
162H2-Aa22377-0.487-0.1433Yes
163Stat422447-0.494-0.1347Yes
164H2-DMa22598-0.514-0.1290Yes
165Ifi3522722-0.530-0.1218Yes
166Xaf122757-0.538-0.1106Yes
167Batf222759-0.538-0.0980Yes
168Socs122945-0.569-0.0926Yes
169Ifnar223024-0.590-0.0821Yes
170Usp1823060-0.600-0.0695Yes
171Cd27423061-0.600-0.0554Yes
172Vamp823154-0.622-0.0447Yes
173Isg2023159-0.624-0.0302Yes
174Pnp23242-0.651-0.0185Yes
175Lgals3bp23360-0.692-0.0072Yes
176Bst223495-0.7860.0055Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_GAMMA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_GAMMA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_GAMMA_RESPONSE