DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.2190906
Normalized Enrichment Score (NES)-0.9577902
Nominal p-value0.53846157
FDR q-value1.0
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rasgrp161.2150.0263No
2Stab1750.8940.0429No
3Msr13960.6820.0442No
4Klf65500.6310.0515No
5Cxcl107210.5900.0571No
6Nod27700.5810.0678No
7Il18rap9510.5530.0722No
8Cybb10350.5400.0804No
9Slc4a410460.5380.0918No
10Pdpn19960.4400.0609No
11Kcnj221140.4320.0654No
12Rnf144b21160.4320.0748No
13Adora2b21540.4280.0826No
14Ldlr22130.4230.0893No
15Itgb824150.4070.0897No
16Il4ra27420.3860.0842No
17Ifitm128510.3800.0879No
18Osmr30030.3670.0895No
19Gnai330210.3670.0968No
20Ptgir31620.3580.0987No
21Chst231830.3560.1056No
22Il1b32010.3560.1126No
23Atp2a233040.3480.1159No
24Lif33430.3460.1218No
25Sgms234460.3400.1249No
26Il1034600.3400.1318No
27Il1836540.3290.1308No
28Fzd538000.3190.1315No
29Timp139520.3100.1319No
30Cd6942650.2950.1250No
31Scarf142660.2950.1315No
32Cd8243070.2930.1362No
33Clec5a44580.2880.1361No
34Npffr245480.2820.1384No
35Il18r146190.2810.1416No
36Atp2b147380.2740.1425No
37Atp2c147400.2740.1485No
38Lck49090.2650.1471No
39Inhba50970.2550.1447No
40Rtp453170.2430.1407No
41Irf755600.2310.1354No
42Adrm155930.2300.1390No
43Il2rb56270.2290.1426No
44Slc31a159010.2200.1358No
45Nampt61790.2060.1285No
46Ros166240.1900.1137No
47Icam167690.1850.1116No
48Aqp968280.1820.1131No
49Ifnar169480.1770.1119No
50Itga570630.1720.1108No
51Kif1b71810.1680.1095No
52Acvr1b72210.1660.1114No
53Slc11a272320.1660.1146No
54Pik3r572910.1630.1157No
55Rgs178520.1400.0949No
56Il15ra79940.1340.0918No
57Raf184780.1230.0739No
58P2ry285020.1220.0756No
59Irf185860.1180.0747No
60Itgb387250.1130.0713No
61Sema4d87540.1120.0725No
62Dcbld290690.1010.0613No
63Mefv92030.0950.0577No
64Selenos92650.0930.0572No
65Il7r94650.0860.0506No
66Pcdh794740.0860.0521No
67Hif1a94750.0860.0540No
68F399720.0680.0343No
69Hrh199880.0670.0351No
70Plaur100860.0630.0324No
71Rhog102530.0570.0266No
72Ffar2102630.0570.0274No
73Tacr3103920.0530.0231No
74Slc31a2105840.0460.0160No
75Abi1108060.0380.0074No
76Psen1109100.0350.0038No
77Olr1110010.0320.0006No
78Eif2ak2111550.027-0.0053No
79Best1117550.006-0.0307No
80Slamf112179-0.004-0.0487No
81Cd4012327-0.010-0.0547No
82Cdkn1a12342-0.011-0.0550No
83Kcnmb212345-0.011-0.0549No
84Sell12413-0.013-0.0575No
85Hpn12704-0.023-0.0693No
86Mmp1412866-0.029-0.0756No
87Slc7a112903-0.030-0.0764No
88Tnfaip613087-0.036-0.0834No
89Tapbp13171-0.039-0.0861No
90Nfkbia13235-0.042-0.0879No
91Ccl2413377-0.047-0.0929No
92Ifngr213402-0.048-0.0928No
93Slc1a213498-0.051-0.0958No
94Slc7a214245-0.077-0.1259No
95Tlr214268-0.078-0.1251No
96Nlrp314633-0.091-0.1387No
97Cd1414679-0.093-0.1385No
98Btg214863-0.099-0.1442No
99Acvr2a14909-0.102-0.1439No
100Icam415489-0.124-0.1659No
101Cxcr615771-0.133-0.1749No
102Met15774-0.134-0.1721No
103Lcp216112-0.146-0.1833No
104Rela16476-0.159-0.1953No
105Lyn16548-0.162-0.1947No
106Il1r116757-0.171-0.1999No
107Cmklr116981-0.180-0.2054No
108Icosl17294-0.189-0.2146Yes
109Sri17319-0.190-0.2115Yes
110Aplnr17324-0.191-0.2075Yes
111Ahr17383-0.193-0.2057Yes
112Calcrl17448-0.195-0.2042Yes
113Nmi17624-0.202-0.2072Yes
114Lpar117776-0.208-0.2091Yes
115Nfkb117895-0.213-0.2095Yes
116Slc28a218024-0.218-0.2102Yes
117Csf3r18233-0.226-0.2142Yes
118Nmur118248-0.226-0.2098Yes
119Tnfrsf1b18294-0.229-0.2067Yes
120P2rx718495-0.237-0.2101Yes
121Ccr718682-0.245-0.2127Yes
122Gch118734-0.248-0.2094Yes
123Axl18825-0.252-0.2078Yes
124Csf118969-0.258-0.2082Yes
125Sele18970-0.258-0.2026Yes
126Osm19064-0.264-0.2008Yes
127Gp1ba19166-0.269-0.1992Yes
128Ccrl219584-0.287-0.2107Yes
129Ebi319695-0.294-0.2090Yes
130Ripk219696-0.294-0.2026Yes
131Pde4b19697-0.294-0.1961Yes
132Cx3cl119706-0.294-0.1900Yes
133Tacr119712-0.295-0.1838Yes
134Il1519802-0.301-0.1810Yes
135Gna1519907-0.307-0.1788Yes
136Lamp319983-0.310-0.1752Yes
137Tnfsf1019999-0.310-0.1690Yes
138Abca120184-0.318-0.1699Yes
139Il10ra20287-0.324-0.1672Yes
140Irak220396-0.329-0.1646Yes
141Ptger420458-0.334-0.1599Yes
142Gabbr120465-0.334-0.1529Yes
143Cd4820489-0.335-0.1465Yes
144Gpr18320543-0.338-0.1414Yes
145Emp320559-0.339-0.1346Yes
146Tnfsf1520836-0.358-0.1385Yes
147Ly6e20897-0.362-0.1332Yes
148Mxd120975-0.368-0.1284Yes
149Ccl521030-0.372-0.1226Yes
150Ptpre21355-0.395-0.1278Yes
151Myc21678-0.422-0.1323Yes
152Gpr13221912-0.441-0.1326Yes
153Tlr122002-0.447-0.1266Yes
154Pvr22041-0.451-0.1184Yes
155Hbegf22162-0.462-0.1134Yes
156Scn1b22205-0.467-0.1050Yes
157Tlr322328-0.482-0.0996Yes
158Ptafr22394-0.489-0.0917Yes
159Kcna322458-0.494-0.0836Yes
160P2rx422654-0.521-0.0805Yes
161Tnfrsf922920-0.564-0.0795Yes
162Adgre123117-0.614-0.0744Yes
163Rgs1623156-0.623-0.0624Yes
164Gpc323298-0.670-0.0538Yes
165Ptger223388-0.709-0.0421Yes
166Tnfsf923435-0.736-0.0280Yes
167Bst223495-0.786-0.0133Yes
168Sphk123549-0.8600.0032Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE