DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group4.GMP.mono_Pheno.cls
#Group2_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group4_repos
Upregulated in class1
GeneSetHALLMARK_G2M_CHECKPOINT
Enrichment Score (ES)0.44259736
Normalized Enrichment Score (NES)1.6763594
Nominal p-value0.047169812
FDR q-value0.104088016
FWER p-Value0.179
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_G2M_CHECKPOINT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Hspa8780.8880.0155Yes
2Srsf11190.8320.0315Yes
3Kpnb13060.7210.0388Yes
4Aurka3600.6960.0513Yes
5Hnrnpu3800.6870.0651Yes
6Plk16530.6030.0663Yes
7Odc16910.5950.0773Yes
8Racgap17380.5870.0878Yes
9Hmmr7730.5810.0987Yes
10Cdkn2c8170.5730.1090Yes
11Incenp8650.5650.1190Yes
12Upf18930.5620.1298Yes
13Lbr9160.5590.1407Yes
14Ccnf9300.5570.1520Yes
15Hnrnpd9920.5470.1610Yes
16Dr110280.5410.1710Yes
17Ccna210430.5390.1818Yes
18Prc111290.5260.1893Yes
19Kif1111760.5210.1984Yes
20Chmp1a11950.5180.2086Yes
21Lmnb112000.5180.2195Yes
22Nek212380.5130.2288Yes
23Kif2c12520.5120.2391Yes
24Xpo113650.4970.2449Yes
25Espl113950.4950.2541Yes
26Cdc25b15690.4750.2568Yes
27Ddx39a16010.4710.2655Yes
28Smc1a17650.4580.2683Yes
29Kif2317880.4570.2770Yes
30Cenpf17930.4560.2865Yes
31Cenpe18740.4500.2927Yes
32Top2a20190.4400.2958Yes
33Sqle20400.4370.3043Yes
34Cdkn1b21300.4300.3096Yes
35Ttk21840.4260.3164Yes
36Sfpq22310.4220.3234Yes
37Kif422960.4160.3294Yes
38Bcl323230.4130.3371Yes
39Kif2223930.4080.3428Yes
40Tfdp124890.4010.3473Yes
41G3bp126140.3940.3503Yes
42Tpx226200.3930.3585Yes
43Ncl26500.3910.3655Yes
44Cdk128680.3790.3643Yes
45Rad2129490.3720.3688Yes
46Odf230160.3670.3738Yes
47Tacc330760.3640.3790Yes
48Bub132190.3550.3804Yes
49Mki6732610.3520.3862Yes
50Aurkb35220.3370.3822Yes
51Chaf1a35470.3350.3883Yes
52Mcm537410.3240.3869Yes
53Amd138190.3180.3904Yes
54Ndc8038950.3120.3938Yes
55Nsd239340.3100.3988Yes
56Kif20b41100.3050.3978Yes
57Uck241450.3020.4027Yes
58Numa141520.3020.4089Yes
59Syncrip42940.2930.4091Yes
60Birc544400.2890.4090Yes
61Tent4a44470.2890.4149Yes
62Pafah1b146690.2780.4114Yes
63Nup9849120.2650.4067Yes
64Cdc749270.2640.4117Yes
65Plk450200.2590.4132Yes
66Kif1550340.2580.4181Yes
67Ilf352340.2470.4149Yes
68Mcm352820.2450.4181Yes
69E2f253700.2410.4195Yes
70Suv39h153900.2400.4237Yes
71Ccnb254380.2370.4268Yes
72Mybl254450.2370.4315Yes
73Tmpo55080.2340.4338Yes
74Smarcc157490.2280.4284Yes
75Lig359520.2170.4244Yes
76Fbxo559980.2150.4271Yes
77Dbf459990.2150.4316Yes
78Tnpo260700.2110.4331Yes
79Cdc661150.2080.4357Yes
80Cul362550.2030.4340Yes
81Polq64370.1980.4305Yes
82Cdc2764700.1960.4333Yes
83Cks264980.1950.4363Yes
84Nusap165690.1920.4374Yes
85Slc7a566320.1890.4387Yes
86H2az167080.1870.4395Yes
87Traip67760.1840.4406Yes
88Mtf268200.1830.4426Yes
89Cenpa70270.1740.4375No
90Mcm270290.1740.4411No
91Gspt172600.1650.4348No
92Ctcf73420.1610.4348No
93Bard173790.1600.4367No
94Nasp73880.1590.4397No
95Egf74040.1590.4424No
96Rad54l74840.1550.4423No
97H2bc1277630.1430.4335No
98Pbk78140.1410.4344No
99Sap3078530.1400.4357No
100Efna578620.1390.4383No
101Tra2b79360.1370.4381No
102Smc279620.1350.4399No
103Nolc180020.1340.4411No
104Ccnt181450.1290.4378No
105Ewsr181480.1290.4404No
106Stil82450.1250.4390No
107Hira86330.1170.4249No
108Mad2l186460.1160.4269No
109Pds5b86600.1150.4288No
110Cul187040.1140.4294No
111Slc12a288260.1090.4265No
112Nup5088400.1090.4283No
113Kif5b88450.1090.4304No
114Rad23b88610.1080.4321No
115Cul4a88960.1070.4329No
116Chek189590.1050.4325No
117Slc38a190910.1000.4290No
118Notch290960.0990.4309No
119Prpf4b93560.0900.4218No
120Pole93830.0890.4226No
121Katna194520.0870.4215No
122Hif1a94750.0860.4224No
123Map3k2095430.0830.4213No
124Srsf1095670.0830.4221No
125Mcm697050.0770.4179No
126Tle397900.0740.4158No
127Ythdc198160.0730.4163No
128Mapk1499970.0670.4101No
129Knl1102200.0580.4018No
130Smc4103790.0530.3962No
131Hmga1b104140.0520.3958No
132Jpt1104210.0510.3967No
133Fancc104720.0500.3956No
134Meis2104830.0490.3962No
135Orc5106180.0450.3915No
136Rbl1106290.0450.3920No
137E2f3106530.0440.3919No
138Snrpd1106780.0430.3918No
139Top1108890.0360.3836No
140Ss18109970.0320.3797No
141Prmt5111790.0260.3725No
142Cbx1113400.0200.3662No
143Atrx114650.0160.3612No
144Wrn116990.0080.3514No
145Cdc25a117740.0050.3484No
146Cdc20119020.0010.3430No
147Arid4a12053-0.0000.3366No
148Ccnd112071-0.0010.3359No
149Kmt5a12136-0.0030.3332No
150Abl112163-0.0040.3322No
151Ube2s12202-0.0060.3307No
152Dtymk12227-0.0060.3298No
153Atf512261-0.0080.3286No
154Cul512422-0.0140.3220No
155Casp8ap212474-0.0160.3202No
156Mnat112478-0.0160.3204No
157Stmn112581-0.0190.3164No
158Dkc112690-0.0230.3123No
159Stag112718-0.0230.3117No
160Srsf212894-0.0300.3048No
161Slc7a112903-0.0300.3051No
162Exo112986-0.0330.3023No
163Prim213226-0.0420.2930No
164Pola213365-0.0470.2881No
165Pttg113943-0.0660.2649No
166Cdk413966-0.0670.2654No
167Rasal214447-0.0850.2467No
168Troap14478-0.0860.2472No
169Ezh214561-0.0890.2456No
170E2f414743-0.0950.2399No
171Meis114946-0.1030.2335No
172Smad315543-0.1260.2107No
173Ube2c15692-0.1300.2072No
174Orc616821-0.1730.1627No
175Cdc4517193-0.1860.1508No
176Rps6ka517205-0.1860.1543No
177Hus117253-0.1880.1563No
178Hmgb317430-0.1950.1529No
179Cks1b17582-0.2000.1507No
180Bub318168-0.2220.1304No
181Foxn318220-0.2250.1330No
182H2ax18546-0.2380.1242No
183Brca218709-0.2460.1225No
184Rpa218794-0.2500.1243No
185Cdkn320112-0.3130.0747No
186E2f120169-0.3170.0790No
187Dmd20525-0.3380.0710No
188Pura20644-0.3460.0733No
189Pml20661-0.3470.0800No
190Tgfb121120-0.3780.0685No
191H2az221263-0.3890.0707No
192Myc21678-0.4220.0620No
193Marcks22452-0.4940.0395No
194Gins222468-0.4960.0493No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_G2M_CHECKPOINT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_G2M_CHECKPOINT: Random ES distribution   
Gene set null distribution of ES for HALLMARK_G2M_CHECKPOINT