| Dataset | GMP.GMP.mono_Pheno.cls #Group2_versus_Group4.GMP.mono_Pheno.cls #Group2_versus_Group4_repos |
| Phenotype | GMP.mono_Pheno.cls#Group2_versus_Group4_repos |
| Upregulated in class | 3 |
| GeneSet | HALLMARK_DNA_REPAIR |
| Enrichment Score (ES) | -0.23013774 |
| Normalized Enrichment Score (NES) | -0.96351236 |
| Nominal p-value | 0.5151515 |
| FDR q-value | 1.0 |
| FWER p-Value | 0.999 |

| SYMBOL | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|
| 1 | Gtf2h3 | 392 | 0.682 | 0.0049 | No |
| 2 | Vps37b | 590 | 0.619 | 0.0161 | No |
| 3 | Npr2 | 855 | 0.566 | 0.0228 | No |
| 4 | Srsf6 | 1059 | 0.537 | 0.0311 | No |
| 5 | Taf1c | 1280 | 0.509 | 0.0378 | No |
| 6 | Ssrp1 | 1321 | 0.502 | 0.0520 | No |
| 7 | Ercc3 | 1604 | 0.470 | 0.0549 | No |
| 8 | Taf9 | 1896 | 0.448 | 0.0567 | No |
| 9 | Ccno | 2070 | 0.435 | 0.0631 | No |
| 10 | Nelfcd | 2987 | 0.368 | 0.0357 | No |
| 11 | Ddb1 | 3110 | 0.361 | 0.0419 | No |
| 12 | Umps | 3528 | 0.336 | 0.0348 | No |
| 13 | Sf3a3 | 4139 | 0.303 | 0.0184 | No |
| 14 | Gtf2f1 | 4339 | 0.291 | 0.0191 | No |
| 15 | Polr2i | 4860 | 0.268 | 0.0054 | No |
| 16 | Rad51 | 4877 | 0.267 | 0.0132 | No |
| 17 | Polh | 5142 | 0.252 | 0.0099 | No |
| 18 | Gtf2h5 | 5490 | 0.234 | 0.0026 | No |
| 19 | Dgcr8 | 5506 | 0.234 | 0.0093 | No |
| 20 | Rfc4 | 5540 | 0.232 | 0.0153 | No |
| 21 | Mrpl40 | 5587 | 0.230 | 0.0206 | No |
| 22 | Adrm1 | 5593 | 0.230 | 0.0276 | No |
| 23 | Pde6g | 5752 | 0.228 | 0.0281 | No |
| 24 | Gtf2h1 | 5770 | 0.227 | 0.0346 | No |
| 25 | Polr1c | 5811 | 0.225 | 0.0400 | No |
| 26 | Sdcbp | 5891 | 0.220 | 0.0436 | No |
| 27 | Polr2a | 6085 | 0.211 | 0.0420 | No |
| 28 | Polr2k | 6240 | 0.203 | 0.0419 | No |
| 29 | Bcap31 | 6754 | 0.185 | 0.0259 | No |
| 30 | Rpa3 | 6851 | 0.181 | 0.0275 | No |
| 31 | Polr3c | 7170 | 0.168 | 0.0193 | No |
| 32 | Snapc4 | 7347 | 0.161 | 0.0169 | No |
| 33 | Cstf3 | 7382 | 0.160 | 0.0205 | No |
| 34 | Polr1d | 7632 | 0.149 | 0.0146 | No |
| 35 | Gtf2b | 7746 | 0.144 | 0.0144 | No |
| 36 | Ak1 | 7772 | 0.143 | 0.0178 | No |
| 37 | Hcls1 | 7790 | 0.142 | 0.0216 | No |
| 38 | Nelfb | 7800 | 0.142 | 0.0257 | No |
| 39 | Fen1 | 7804 | 0.142 | 0.0301 | No |
| 40 | Polr2f | 7885 | 0.139 | 0.0310 | No |
| 41 | Rrm2b | 7917 | 0.137 | 0.0341 | No |
| 42 | Impdh2 | 8229 | 0.125 | 0.0248 | No |
| 43 | Usp11 | 8659 | 0.115 | 0.0102 | No |
| 44 | Cetn2 | 8726 | 0.113 | 0.0109 | No |
| 45 | Polr2d | 8940 | 0.106 | 0.0052 | No |
| 46 | Pcna | 8980 | 0.104 | 0.0068 | No |
| 47 | Polr2h | 9017 | 0.103 | 0.0086 | No |
| 48 | Tk2 | 9126 | 0.098 | 0.0071 | No |
| 49 | Ncbp2 | 9188 | 0.096 | 0.0075 | No |
| 50 | Ercc5 | 9284 | 0.093 | 0.0064 | No |
| 51 | Supt5 | 9360 | 0.090 | 0.0060 | No |
| 52 | Xpc | 9559 | 0.083 | 0.0002 | No |
| 53 | Eloa | 9604 | 0.081 | 0.0009 | No |
| 54 | Lig1 | 9720 | 0.076 | -0.0016 | No |
| 55 | Zwint | 9805 | 0.074 | -0.0028 | No |
| 56 | Pold4 | 9907 | 0.070 | -0.0049 | No |
| 57 | Rfc5 | 10110 | 0.062 | -0.0115 | No |
| 58 | Pole4 | 10152 | 0.061 | -0.0114 | No |
| 59 | Cox17 | 10406 | 0.052 | -0.0205 | No |
| 60 | Ercc4 | 10633 | 0.045 | -0.0287 | No |
| 61 | Nme3 | 10712 | 0.042 | -0.0307 | No |
| 62 | Clp1 | 10773 | 0.039 | -0.0320 | No |
| 63 | Taf10 | 10815 | 0.038 | -0.0326 | No |
| 64 | Prim1 | 10983 | 0.032 | -0.0386 | No |
| 65 | Alyref | 11095 | 0.029 | -0.0424 | No |
| 66 | Guk1 | 11539 | 0.013 | -0.0609 | No |
| 67 | Nfx1 | 11569 | 0.012 | -0.0617 | No |
| 68 | Gtf3c5 | 11587 | 0.012 | -0.0621 | No |
| 69 | Ercc8 | 11868 | 0.002 | -0.0740 | No |
| 70 | Dut | 11928 | 0.001 | -0.0764 | No |
| 71 | Rala | 12044 | -0.000 | -0.0813 | No |
| 72 | Gpx4 | 12085 | -0.001 | -0.0830 | No |
| 73 | Ddb2 | 12368 | -0.012 | -0.0946 | No |
| 74 | Nelfe | 12406 | -0.013 | -0.0958 | No |
| 75 | Eif1b | 12719 | -0.023 | -0.1084 | No |
| 76 | Edf1 | 13057 | -0.035 | -0.1216 | No |
| 77 | Nt5c3 | 13222 | -0.042 | -0.1273 | No |
| 78 | Smad5 | 13331 | -0.045 | -0.1304 | No |
| 79 | Pola2 | 13365 | -0.047 | -0.1304 | No |
| 80 | Supt4a | 13647 | -0.056 | -0.1405 | No |
| 81 | Tarbp2 | 13813 | -0.061 | -0.1456 | No |
| 82 | Taf13 | 13850 | -0.063 | -0.1452 | No |
| 83 | Rev3l | 13868 | -0.063 | -0.1439 | No |
| 84 | Poll | 14036 | -0.068 | -0.1488 | No |
| 85 | Ada | 14119 | -0.072 | -0.1501 | No |
| 86 | Pola1 | 14132 | -0.072 | -0.1483 | No |
| 87 | Taf12 | 14259 | -0.077 | -0.1512 | No |
| 88 | Gmpr2 | 14578 | -0.090 | -0.1619 | No |
| 89 | Nt5c | 15029 | -0.106 | -0.1777 | No |
| 90 | Rnmt | 15103 | -0.109 | -0.1774 | No |
| 91 | Pold3 | 15198 | -0.112 | -0.1778 | No |
| 92 | Aaas | 15205 | -0.113 | -0.1745 | No |
| 93 | Dguok | 15251 | -0.115 | -0.1728 | No |
| 94 | Nme1 | 15267 | -0.115 | -0.1698 | No |
| 95 | Nudt9 | 15284 | -0.116 | -0.1668 | No |
| 96 | Rad52 | 15285 | -0.116 | -0.1632 | No |
| 97 | Taf6 | 15405 | -0.120 | -0.1644 | No |
| 98 | Mpg | 15584 | -0.127 | -0.1680 | No |
| 99 | Rfc3 | 15598 | -0.128 | -0.1645 | No |
| 100 | Polr2e | 15992 | -0.142 | -0.1767 | No |
| 101 | Trp53 | 16102 | -0.145 | -0.1768 | No |
| 102 | Sec61a1 | 16130 | -0.147 | -0.1733 | No |
| 103 | Polr2j | 16188 | -0.149 | -0.1710 | No |
| 104 | Rbx1 | 16309 | -0.153 | -0.1713 | No |
| 105 | Ercc1 | 16371 | -0.155 | -0.1690 | No |
| 106 | Tsg101 | 16684 | -0.169 | -0.1769 | No |
| 107 | Dctn4 | 16700 | -0.169 | -0.1722 | No |
| 108 | Nudt21 | 16781 | -0.172 | -0.1702 | No |
| 109 | Polb | 16815 | -0.173 | -0.1661 | No |
| 110 | Cant1 | 17068 | -0.183 | -0.1710 | No |
| 111 | Pold1 | 17079 | -0.184 | -0.1657 | No |
| 112 | Polr2c | 17631 | -0.203 | -0.1827 | No |
| 113 | Rae1 | 17818 | -0.210 | -0.1840 | No |
| 114 | Cmpk2 | 17837 | -0.211 | -0.1781 | No |
| 115 | Rpa2 | 18794 | -0.250 | -0.2109 | No |
| 116 | Ell | 19125 | -0.267 | -0.2165 | No |
| 117 | Upf3b | 19446 | -0.281 | -0.2212 | Yes |
| 118 | Gtf2a2 | 19594 | -0.288 | -0.2184 | Yes |
| 119 | Itpa | 19612 | -0.289 | -0.2100 | Yes |
| 120 | Pde4b | 19697 | -0.294 | -0.2043 | Yes |
| 121 | Arl6ip1 | 19806 | -0.301 | -0.1993 | Yes |
| 122 | Ercc2 | 20183 | -0.318 | -0.2053 | Yes |
| 123 | Dad1 | 20333 | -0.326 | -0.2013 | Yes |
| 124 | Pom121 | 20750 | -0.353 | -0.2078 | Yes |
| 125 | Brf2 | 20951 | -0.366 | -0.2048 | Yes |
| 126 | Aprt | 20989 | -0.368 | -0.1947 | Yes |
| 127 | Nme4 | 20997 | -0.369 | -0.1833 | Yes |
| 128 | Sac3d1 | 21027 | -0.372 | -0.1728 | Yes |
| 129 | Stx3 | 21157 | -0.380 | -0.1663 | Yes |
| 130 | Ak3 | 21608 | -0.415 | -0.1723 | Yes |
| 131 | Vps28 | 21627 | -0.417 | -0.1599 | Yes |
| 132 | Mpc2 | 21685 | -0.422 | -0.1489 | Yes |
| 133 | Polr1h | 21734 | -0.427 | -0.1375 | Yes |
| 134 | Tyms | 21874 | -0.439 | -0.1295 | Yes |
| 135 | Rfc2 | 22173 | -0.463 | -0.1275 | Yes |
| 136 | Snapc5 | 22382 | -0.488 | -0.1210 | Yes |
| 137 | Ago4 | 22467 | -0.496 | -0.1089 | Yes |
| 138 | Surf1 | 22754 | -0.537 | -0.1040 | Yes |
| 139 | Adcy6 | 22787 | -0.542 | -0.0882 | Yes |
| 140 | Cda | 22845 | -0.550 | -0.0732 | Yes |
| 141 | Zfp707 | 23143 | -0.621 | -0.0662 | Yes |
| 142 | Polr3gl | 23184 | -0.633 | -0.0479 | Yes |
| 143 | Pnp | 23242 | -0.651 | -0.0297 | Yes |
| 144 | Gsdme | 23386 | -0.708 | -0.0134 | Yes |
| 145 | Polr2g | 23444 | -0.743 | 0.0077 | Yes |

