DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group3.GMP.mono_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_PROTEIN_SECRETION
Enrichment Score (ES)0.36234146
Normalized Enrichment Score (NES)1.5651948
Nominal p-value0.08884297
FDR q-value0.22330754
FWER p-Value0.323
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PROTEIN_SECRETION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Abca1680.8440.0387Yes
2Ctsc1580.7360.0711Yes
3Tom1l12290.6930.1023Yes
4Atp1a12410.6830.1354Yes
5Cltc3430.6260.1620Yes
6Gla7520.5230.1704Yes
7Uso110950.4700.1789Yes
8Igf2r13140.4450.1916Yes
9Anp32e14640.4320.2065Yes
10Adam1019380.3860.2054Yes
11Copb221950.3670.2126Yes
12Arf123160.3560.2250Yes
13M6pr23950.3520.2391Yes
14Tmx125920.3400.2475Yes
15Scamp126320.3380.2625Yes
16Lamp227460.3290.2739Yes
17Atp6v1h27560.3280.2896Yes
18Arfgef229000.3180.2992Yes
19Copb131760.3040.3025Yes
20Tpd5238290.2700.2881Yes
21Zw1040090.2610.2933Yes
22Ap1g140700.2580.3035Yes
23Ap2b141250.2550.3137Yes
24Lman141810.2520.3238Yes
25Bnip343430.2440.3290Yes
26Ap2s147250.2280.3240Yes
27Arfip150390.2130.3212Yes
28Snap2352420.2040.3226Yes
29Scrn153090.2010.3297Yes
30Ppt154940.1930.3314Yes
31Arcn157760.1820.3285Yes
32Snx257950.1810.3366Yes
33Dnm1l59890.1740.3370Yes
34Mon260390.1720.3434Yes
35Rab5a62340.1650.3432Yes
36Dst63550.1600.3460Yes
37Galc65810.1520.3439Yes
38Rps6ka366080.1510.3502Yes
39Stx1667080.1470.3533Yes
40Stx1268650.1410.3536Yes
41Napa69310.1390.3576Yes
42Ap3b169800.1370.3623Yes
43Kif1b73070.1240.3546No
44Sec31a74760.1220.3534No
45Cln575600.1180.3557No
46Golga477780.1110.3520No
47Clta78060.1100.3563No
48Rer178340.1090.3605No
49Arfgef179420.1050.3611No
50Mapk182580.0950.3524No
51Vamp485130.0860.3458No
52Tmed1085730.0840.3474No
53Sod188100.0760.3412No
54Ap2m189430.0720.3391No
55Pam93740.0580.3237No
56Ykt696270.0500.3154No
57Stam99530.0400.3036No
58Cope101550.0340.2967No
59Atp7a101830.0340.2972No
60Rab2a105470.0230.2829No
61Cog2106100.0210.2813No
62Yipf6107920.0150.2744No
63Vps4b110670.0060.2630No
64Sec22b11638-0.0100.2393No
65Clcn311682-0.0120.2380No
66Stx711784-0.0150.2345No
67Gbf111857-0.0170.2322No
68Cav212060-0.0230.2248No
69Egfr12324-0.0310.2151No
70Sec24d12440-0.0350.2119No
71Ergic312500-0.0360.2112No
72Vamp312513-0.0370.2125No
73Rab1412523-0.0370.2140No
74Vps4513450-0.0700.1780No
75Rab913461-0.0700.1811No
76Scamp313802-0.0810.1706No
77Gosr213819-0.0820.1739No
78Napg14576-0.1040.1469No
79Tspan815376-0.1320.1195No
80Arfgap315407-0.1330.1248No
81Rab22a15691-0.1440.1198No
82Atp6v1b116259-0.1650.1039No
83Ap3s116629-0.1780.0969No
84Dop1a17323-0.2050.0776No
85Ica117994-0.2340.0606No
86Sspn18072-0.2370.0691No
87Gnas19036-0.2770.0418No
88Tsg10119187-0.2850.0494No
89Ocrl19613-0.3060.0464No
90Sgms119883-0.3200.0508No
91Bet120708-0.3710.0340No
92Krt1822772-0.580-0.0251No
93Cd6322806-0.5860.0023No
94Sh3gl223123-0.6580.0213No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PROTEIN_SECRETION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PROTEIN_SECRETION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PROTEIN_SECRETION