DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group3.GMP.mono_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_KRAS_SIGNALING_DN
Enrichment Score (ES)-0.28385764
Normalized Enrichment Score (NES)-1.0990208
Nominal p-value0.27920792
FDR q-value1.0
FWER p-Value0.967
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_KRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Mx24370.594-0.0000No
2Copz25070.5760.0151No
3Sidt18030.5150.0187No
4Tnni38050.5150.0348No
5Tgm18900.4990.0468No
6Sgk110720.4730.0539No
7Gdnf19610.3850.0282No
8Abcg420570.3790.0360No
9Vps5021570.3700.0434No
10Ngb22260.3650.0519No
11Bmpr1b23050.3570.0597No
12Chst223210.3560.0703No
13Cpb127900.3270.0606No
14Skil30170.3110.0607No
15Zc2hc1c31090.3070.0664No
16Tent5c34010.2910.0632No
17Col2a138210.2710.0538No
18Dlk239820.2630.0553No
19Celsr240650.2580.0598No
20Itgb1bp245410.2330.0469No
21Pax345750.2310.0528No
22Plag150890.2110.0375No
23Lfng51490.2080.0415No
24Cacna1f54190.1970.0362No
25Nrip254990.1930.0389No
26Mefv55500.1910.0428No
27Grid258630.1780.0351No
28Slc12a359160.1770.0384No
29Gpr1962190.1650.0307No
30Serpinb263820.1590.0288No
31Stag364360.1570.0315No
32Cyp39a164850.1550.0343No
33Prodh67300.1460.0285No
34Hc68040.1430.0298No
35Gtf3c569650.1370.0273No
36Myo15a72480.1260.0193No
37Oxt73120.1240.0205No
38Kcnq273750.1230.0217No
39Egf75000.1210.0202No
40Rsad275450.1190.0220No
41Camk1d77860.1110.0153No
42Tgfb278790.1070.0147No
43Nr6a179920.1040.0132No
44Htr1d82530.0950.0051No
45Sptbn286720.081-0.0101No
46Gp1ba88210.076-0.0141No
47Arhgdig92320.062-0.0295No
48Bard194800.054-0.0384No
49Klk896560.049-0.0443No
50Cdkal1105490.023-0.0815No
51Cpeb3105990.021-0.0830No
52Scn10a106960.018-0.0865No
53Tg11807-0.016-0.1332No
54Efhd111873-0.017-0.1354No
55Mthfr12560-0.038-0.1635No
56Snn12643-0.041-0.1657No
57Fgfr312886-0.049-0.1744No
58Thnsl213017-0.054-0.1783No
59Hsd11b213300-0.064-0.1883No
60Pdcd113477-0.070-0.1935No
61Mfsd613569-0.073-0.1951No
62Entpd713645-0.076-0.1959No
63Arpp2113687-0.078-0.1952No
64Ybx213695-0.078-0.1931No
65Epha513935-0.085-0.2006No
66Ntf314086-0.090-0.2042No
67Pde6b14345-0.099-0.2121No
68Tshb14426-0.101-0.2123No
69Coq8a14540-0.103-0.2139No
70Slc5a514593-0.105-0.2128No
71Thrb14707-0.109-0.2142No
72Asb714751-0.111-0.2125No
73Ptprj14753-0.111-0.2091No
74Gamt14908-0.117-0.2120No
75Cd8015062-0.122-0.2147No
76Slc30a315067-0.122-0.2110No
77Fggy15094-0.123-0.2083No
78Slc29a315450-0.135-0.2192No
79Nphs115493-0.137-0.2167No
80Ryr215619-0.141-0.2176No
81Kmt2d15745-0.146-0.2184No
82Prkn15826-0.149-0.2171No
83Clstn315883-0.152-0.2147No
84Btg216222-0.164-0.2240No
85Atp6v1b116259-0.165-0.2203No
86Nos116315-0.167-0.2175No
87Pdk216493-0.172-0.2196No
88Tfcp2l116533-0.174-0.2158No
89Il516659-0.179-0.2155No
90Abcb1117001-0.192-0.2240No
91Selenop17022-0.193-0.2188No
92Rgs1117424-0.210-0.2293No
93Cpa217715-0.221-0.2348No
94Magix17884-0.228-0.2348No
95Sphk217927-0.231-0.2293No
96Cntfr18101-0.238-0.2292No
97Ryr118212-0.242-0.2263No
98Slc16a719169-0.284-0.2581No
99Brdt19367-0.292-0.2574No
100Macroh2a219438-0.296-0.2511No
101Kcnn119726-0.313-0.2535No
102Nr4a220440-0.355-0.2727Yes
103Zfp11220582-0.364-0.2674Yes
104Edar20703-0.371-0.2608Yes
105Fgf2220800-0.377-0.2531Yes
106Capn920844-0.379-0.2431Yes
107Tcf7l120859-0.380-0.2318Yes
108Lgals720927-0.385-0.2226Yes
109Tex1520975-0.387-0.2124Yes
110Slc6a321068-0.394-0.2040Yes
111Mast321350-0.415-0.2030Yes
112Dtnb21411-0.422-0.1923Yes
113Atp4a21614-0.438-0.1872Yes
114Dcc21964-0.469-0.1874Yes
115Serpina1021969-0.469-0.1729Yes
116Tenm221973-0.469-0.1583Yes
117Idua22064-0.479-0.1471Yes
118Ccdc10622225-0.497-0.1384Yes
119Kcnd122308-0.506-0.1260Yes
120Kcnmb122835-0.594-0.1298Yes
121Synpo23009-0.627-0.1175Yes
122Zbtb1623100-0.652-0.1009Yes
123Ypel123197-0.686-0.0835Yes
124P2rx623213-0.691-0.0625Yes
125Slc25a2323283-0.722-0.0428Yes
126Msh523485-0.851-0.0247Yes
127Hnf1a23564-0.9770.0026Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_KRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_KRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for HALLMARK_KRAS_SIGNALING_DN