DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group3.GMP.mono_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.4307757
Normalized Enrichment Score (NES)1.5452673
Nominal p-value0.112426035
FDR q-value0.1684481
FWER p-Value0.351
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Dck1170.7740.0140Yes
2Tfrc2180.6970.0269Yes
3Srsf12550.6740.0419Yes
4Ipo76480.5430.0386Yes
5Dnmt16510.5420.0518Yes
6Lmnb18100.5130.0577Yes
7Lbr8840.5000.0669Yes
8Rbbp78970.4980.0786Yes
9Hnrnpd9000.4980.0908Yes
10Aurka12910.4480.0851Yes
11Rrm213500.4410.0935Yes
12Anp32e14640.4320.0993Yes
13Slbp15060.4270.1081Yes
14Bub1b15460.4230.1168Yes
15Mcm216290.4130.1235Yes
16Cdkn1b16910.4080.1309Yes
17Prps117020.4070.1405Yes
18Smc1a17310.4040.1492Yes
19Mcm317380.4030.1589Yes
20Ccp11017870.3990.1666Yes
21Nasp18700.3930.1728Yes
22Ccne118930.3910.1815Yes
23Cdk119880.3840.1869Yes
24Phf5a21410.3710.1895Yes
25Smc322060.3660.1958Yes
26Mcm422340.3640.2036Yes
27Cse1l24350.3500.2037Yes
28Xpo124390.3500.2121Yes
29Kif2225080.3460.2177Yes
30Plk125890.3400.2227Yes
31Ddx39a27530.3280.2238Yes
32Mcm728840.3190.2261Yes
33Nap1l129730.3130.2301Yes
34Nolc129900.3120.2371Yes
35Ssrp131750.3040.2367Yes
36Racgap132380.3010.2414Yes
37Kif432430.3000.2486Yes
38Cdkn2c32590.3000.2554Yes
39Cdca832680.2990.2624Yes
40Hells32960.2970.2685Yes
41Top2a33380.2950.2740Yes
42Brca133950.2910.2788Yes
43Cks235830.2840.2778Yes
44Pnn36110.2820.2836Yes
45Rad51c36760.2790.2877Yes
46Ubr736860.2780.2942Yes
47Mybl237070.2770.3001Yes
48Msh237430.2750.3054Yes
49Ran37580.2740.3115Yes
50Dlgap537870.2720.3170Yes
51Mad2l138140.2720.3226Yes
52Eif2s138770.2680.3265Yes
53Zw1040090.2610.3273Yes
54Lyar40320.2600.3328Yes
55Suv39h140620.2580.3379Yes
56Lsm842430.2490.3363Yes
57Cenpe43360.2440.3384Yes
58Kif2c43500.2430.3438Yes
59Syncrip43740.2420.3488Yes
60Ncapd244260.2390.3525Yes
61Hmgb245390.2330.3534Yes
62Smc645690.2320.3579Yes
63Atad246010.2310.3623Yes
64Mcm646210.2300.3671Yes
65Pcna46280.2300.3725Yes
66Pttg147720.2260.3719Yes
67Eed47740.2260.3775Yes
68Usp148090.2250.3815Yes
69Hmmr48650.2220.3846Yes
70Nme148910.2210.3890Yes
71E2f849550.2180.3917Yes
72Shmt149650.2170.3966Yes
73Nup10749680.2170.4019Yes
74Plk450060.2140.4056Yes
75Mki6750600.2120.4085Yes
76Cdc25a50750.2120.4131Yes
77Tbrg451740.2070.4140Yes
78Birc552110.2050.4175Yes
79Cdc25b53650.1990.4159Yes
80Gspt155460.1910.4129Yes
81Cbx555850.1900.4160Yes
82Tmpo58950.1780.4071Yes
83Pa2g459000.1780.4113Yes
84Nup20559100.1770.4153Yes
85Ppp1r859130.1770.4196Yes
86Ak259440.1750.4226Yes
87Mcm560200.1730.4237Yes
88Tacc360330.1720.4274Yes
89Prkdc60530.1710.4308Yes
90Rad2162300.1650.4273No
91Ranbp162570.1640.4302No
92Lig163710.1600.4293No
93Tra2b65340.1530.4262No
94Rpa166700.1480.4241No
95Espl166780.1480.4274No
96Nup15367190.1460.4293No
97Ilf370140.1360.4201No
98Cit72300.1270.4140No
99Mthfd272520.1260.4162No
100Pan274430.1230.4111No
101Spag574870.1210.4123No
102Dut75440.1190.4128No
103Pole476420.1150.4115No
104Xrcc677120.1130.4113No
105Orc277960.1110.4105No
106Rad51ap179450.1050.4068No
107Cnot981190.1000.4018No
108Timeless83360.0920.3949No
109Rad5085520.0850.3878No
110Paics85620.0840.3895No
111Chek186620.0820.3873No
112Mre11a87840.0770.3840No
113Psip187880.0770.3858No
114Ctcf87920.0770.3875No
115Spc2588150.0760.3884No
116Ezh288380.0750.3894No
117Aurkb89800.0710.3851No
118Tubb589830.0710.3867No
119Tipin89910.0700.3882No
120Nop5690740.0680.3863No
121Rfc393560.0590.3758No
122Stag194250.0560.3743No
123Tcf1994670.0550.3739No
124Bard194800.0540.3747No
125Melk97460.0460.3645No
126Nbn98780.0420.3600No
127Chek299690.0400.3571No
128Pds5b100050.0380.3565No
129Rfc1101620.0340.3507No
130Rpa3101930.0330.3503No
131Pola2102600.0310.3482No
132Hmgb3102720.0300.3485No
133Pole109220.0110.3210No
134Smc4109480.0100.3202No
135H2az1109900.0080.3187No
136Trip13112130.0020.3093No
137Mms22l112180.0020.3091No
138Luc7l3112590.0010.3074No
139Wee1112610.0010.3074No
140Dek11488-0.0040.2979No
141Pms211500-0.0050.2975No
142Dclre1b11540-0.0060.2960No
143Depdc1a11742-0.0130.2878No
144Psmc3ip11814-0.0160.2851No
145Asf1a11893-0.0180.2822No
146Ube2s11956-0.0200.2801No
147Rad112003-0.0210.2786No
148Cdk412016-0.0210.2786No
149Gins112065-0.0230.2772No
150Brms1l12066-0.0230.2777No
151Stmn112174-0.0260.2738No
152Diaph312249-0.0280.2713No
153Dctpp112283-0.0290.2707No
154Gins412304-0.0300.2705No
155Ing312458-0.0350.2649No
156Pold312653-0.0410.2576No
157Jpt112800-0.0460.2525No
158Orc613192-0.0600.2373No
159Exosc813325-0.0650.2333No
160Trp5313333-0.0650.2346No
161Cdc2013801-0.0810.2166No
162Donson13846-0.0820.2168No
163Cdkn1a13944-0.0860.2147No
164Gins314368-0.0990.1991No
165Rnaseh2a14407-0.1010.2000No
166Nudt2114422-0.1010.2019No
167Pold214575-0.1040.1979No
168Mlh114754-0.1110.1931No
169Prim214780-0.1120.1948No
170Spc2415015-0.1200.1877No
171Kif18b15101-0.1230.1871No
172Ppm1d15139-0.1240.1886No
173Ube2t15499-0.1370.1767No
174Snrpb15553-0.1390.1778No
175Pop715948-0.1540.1648No
176Cdkn2a16274-0.1650.1550No
177Hus116279-0.1650.1589No
178Prdx416406-0.1700.1577No
179Asf1b16498-0.1720.1580No
180Tk116570-0.1750.1593No
181Cks1b16692-0.1800.1586No
182Pold117664-0.2190.1225No
183Rpa217849-0.2270.1202No
184Ung17944-0.2320.1219No
185H2ax18175-0.2410.1180No
186Srsf218259-0.2440.1205No
187Ccnb218733-0.2640.1068No
188Brca218867-0.2700.1077No
189Dscc119712-0.3120.0794No
190Tubg119744-0.3130.0858No
191Wdr9019799-0.3170.0912No
192Cenpm19889-0.3210.0953No
193Rfc220223-0.3420.0895No
194Myc20453-0.3560.0885No
195Mxd320622-0.3650.0903No
196Cdca320916-0.3850.0872No
197Hmga1b21257-0.4080.0828No
198Cdkn323329-0.7420.0126No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS