DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group3.GMP.mono_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class2
GeneSetHALLMARK_DNA_REPAIR
Enrichment Score (ES)-0.13973801
Normalized Enrichment Score (NES)-0.53590393
Nominal p-value0.88100207
FDR q-value0.9594919
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_DNA_REPAIR   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Npr25980.554-0.0057No
2Ddb17180.5260.0080No
3Vps37b7750.5200.0242No
4Polr2d10910.4700.0275No
5Gtf2h314550.4320.0275No
6Ak115830.4180.0370No
7Ccno17830.3990.0428No
8Gtf2f121530.3700.0402No
9Sf3a322920.3580.0471No
10Bcap3124450.3490.0531No
11Umps25660.3420.0602No
12Polr2i25750.3410.0721No
13Eloa30220.3110.0642No
14Polr2k31040.3080.0717No
15Ssrp131750.3040.0796No
16Polr1d38360.2700.0611No
17Polh39340.2650.0664No
18Ercc340020.2610.0729No
19Sdcbp41380.2540.0762No
20Pde6g44610.2380.0710No
21Pcna46280.2300.0721No
22Nme148910.2210.0688No
23Srsf650950.2110.0677No
24Nelfcd51240.2090.0740No
25Nfx153890.1990.0698No
26Edf155640.1900.0692No
27Taf1357100.1850.0696No
28Polr2a59550.1750.0655No
29Polr3c59740.1740.0709No
30Rad5159880.1740.0766No
31Alyref61120.1690.0774No
32Ddb262070.1660.0793No
33Nelfe62740.1630.0823No
34Taf963210.1620.0861No
35Lig163710.1600.0897No
36Snapc463990.1580.0942No
37Taf1c65690.1520.0925No
38Prim166010.1510.0965No
39Cstf366940.1470.0978No
40Mrpl4067200.1460.1020No
41Gtf2h168240.1420.1027No
42Pnp68350.1420.1073No
43Gtf3c569650.1370.1067No
44Taf1072940.1240.0972No
45Dut75440.1190.0908No
46Rrm2b75540.1180.0946No
47Pole476420.1150.0951No
48Nme378640.1080.0895No
49Guk180610.1010.0848No
50Polr2f82400.0950.0806No
51Impdh282850.0940.0821No
52Rfc483980.0900.0805No
53Gtf2b86610.0820.0723No
54Hcls186730.0810.0747No
55Polr2h87150.0790.0758No
56Ercc488350.0760.0734No
57Fen189740.0710.0701No
58Ada92440.0620.0608No
59Rfc393560.0590.0582No
60Cmpk298000.0440.0409No
61Rfc599130.0410.0376No
62Gpx499290.0410.0384No
63Pola199940.0390.0371No
64Rpa3101930.0330.0298No
65Polr2c102250.0320.0296No
66Clp1102380.0320.0302No
67Pola2102600.0310.0305No
68Brf2103090.0290.0295No
69Nt5c103430.0290.0291No
70Zwint103450.0290.0301No
71Polr1c105980.0210.0201No
72Supt4a106430.0200.0189No
73Supt5107750.0150.0139No
74Gtf2h5108550.0130.0110No
75Cox17109300.0110.0082No
76Taf6111730.003-0.0020No
77Sec61a1112340.001-0.0045No
78Dgcr811507-0.005-0.0159No
79Rnmt12432-0.034-0.0540No
80Ercc812601-0.039-0.0598No
81Pold312653-0.041-0.0605No
82Rbx112784-0.045-0.0644No
83Nelfb12839-0.047-0.0650No
84Rala12925-0.051-0.0668No
85Nt5c312933-0.051-0.0653No
86Ak312968-0.053-0.0649No
87Cetn213256-0.063-0.0749No
88Dctn413310-0.064-0.0748No
89Trp5313333-0.065-0.0734No
90Polb13428-0.069-0.0750No
91Ncbp213434-0.069-0.0727No
92Rad5213584-0.074-0.0764No
93Ercc513614-0.075-0.0750No
94Dad113945-0.086-0.0860No
95Smad514016-0.088-0.0859No
96Nudt2114422-0.101-0.0995No
97Polr1h15010-0.120-0.1202No
98Rae115079-0.122-0.1187No
99Rev3l15284-0.129-0.1228No
100Nudt915517-0.137-0.1278No
101Aprt15798-0.148-0.1345Yes
102Ercc215904-0.152-0.1335Yes
103Mpc215983-0.155-0.1313Yes
104Xpc16027-0.157-0.1275Yes
105Gmpr216065-0.158-0.1234Yes
106Polr2e16150-0.161-0.1212Yes
107Mpg16304-0.166-0.1218Yes
108Eif1b16413-0.170-0.1203Yes
109Nme416565-0.175-0.1205Yes
110Adrm116664-0.179-0.1183Yes
111Aaas16835-0.184-0.1190Yes
112Usp1116922-0.188-0.1159Yes
113Upf3b16987-0.191-0.1118Yes
114Cant117064-0.194-0.1081Yes
115Snapc517167-0.199-0.1054Yes
116Ago417243-0.201-0.1014Yes
117Vps2817478-0.212-0.1038Yes
118Polr2j17550-0.215-0.0991Yes
119Pold117664-0.219-0.0961Yes
120Tarbp217691-0.220-0.0894Yes
121Taf1217738-0.221-0.0834Yes
122Rpa217849-0.227-0.0800Yes
123Ercc118173-0.241-0.0852Yes
124Arl6ip118447-0.253-0.0878Yes
125Gtf2a218457-0.254-0.0791Yes
126Tyms18794-0.267-0.0839Yes
127Pom12119047-0.278-0.0847Yes
128Tsg10119187-0.285-0.0805Yes
129Surf119285-0.289-0.0743Yes
130Adcy619484-0.299-0.0721Yes
131Polr2g19658-0.309-0.0685Yes
132Ell19869-0.320-0.0660Yes
133Pold420213-0.341-0.0684Yes
134Rfc220223-0.342-0.0566Yes
135Pde4b21096-0.396-0.0796Yes
136Itpa21560-0.434-0.0839Yes
137Sac3d121602-0.437-0.0700Yes
138Stx321694-0.446-0.0580Yes
139Gsdme21885-0.463-0.0496Yes
140Zfp70721920-0.465-0.0344Yes
141Poll22598-0.550-0.0436Yes
142Tk222604-0.550-0.0242Yes
143Polr3gl22725-0.571-0.0089Yes
144Dguok22905-0.6060.0051Yes
145Cda23260-0.7140.0155Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_DNA_REPAIR   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_DNA_REPAIR: Random ES distribution   
Gene set null distribution of ES for HALLMARK_DNA_REPAIR