DatasetGMP.GMP.mono_Pheno.cls
#Group2_versus_Group3.GMP.mono_Pheno.cls
#Group2_versus_Group3_repos
PhenotypeGMP.mono_Pheno.cls#Group2_versus_Group3_repos
Upregulated in class1
GeneSetHALLMARK_CHOLESTEROL_HOMEOSTASIS
Enrichment Score (ES)0.3504893
Normalized Enrichment Score (NES)1.1581321
Nominal p-value0.27
FDR q-value0.7984795
FWER p-Value0.936
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Lgals3201.0640.0730Yes
2Cyp512780.6600.1080Yes
3Idi14140.6030.1441Yes
4Clu6260.5460.1731Yes
5Trib37690.5200.2033Yes
6Stard48790.5020.2335Yes
7Sqle10670.4730.2584Yes
8Actg114360.4340.2729Yes
9Hmgcs116520.4110.2923Yes
10Tm7sf218040.3970.3135Yes
11Ldlr25580.3430.3054Yes
12Hmgcr27170.3320.3217Yes
13Fads233660.2930.3146Yes
14Plscr137000.2770.3197Yes
15Lss38890.2670.3303Yes
16Atf346120.2300.3156Yes
17Tnfrsf12a49030.2200.3186Yes
18Antxr250460.2130.3274Yes
19Fdft152460.2040.3331Yes
20Mvd53860.1990.3410Yes
21Ctnnb154800.1940.3505Yes
22Atxn257800.1820.3505No
23Anxa561000.1700.3487No
24Tmem9766870.1470.3340No
25Fdps74380.1230.3107No
26Jag180070.1030.2938No
27Ethe182020.0970.2923No
28Srebf282430.0950.2972No
29Cpeb285230.0860.2913No
30Fabp586360.0820.2923No
31Gnai190660.0680.2788No
32Pmvk93770.0580.2697No
33Ech198720.0420.2516No
34S100a1198760.0420.2544No
35Acss2101640.0340.2446No
36Sc5d104600.0250.2338No
37Sema3b106790.0190.2259No
38Hsd17b7107740.0150.2229No
39Aldoc108460.0130.2208No
40Nfil3112220.0020.2050No
41Niban111708-0.0120.1853No
42Gusb12343-0.0310.1606No
43Nsdhl12673-0.0420.1495No
44Lgmn12705-0.0430.1512No
45Fasn12793-0.0460.1507No
46Pdk312807-0.0460.1533No
47Acat213250-0.0620.1389No
48Lpl14165-0.0930.1066No
49Errfi114212-0.0940.1111No
50Cd914296-0.0970.1144No
51Dhcr714413-0.1010.1165No
52Plaur14731-0.1100.1107No
53Ebp14783-0.1120.1163No
54Mvk15463-0.1350.0969No
55Atf515680-0.1430.0976No
56Pcyt215733-0.1450.1055No
57Pnrc116490-0.1720.0854No
58Fbxo616847-0.1850.0831No
59Pparg16877-0.1860.0948No
60Chka17154-0.1980.0969No
61Stx5a18957-0.2730.0393No
62Gldc20670-0.369-0.0077No
63Alcam20853-0.3800.0109No
64Abca220921-0.3850.0348No
65Gstm721085-0.3950.0554No
66Trp53inp123357-0.7540.0113No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_CHOLESTEROL_HOMEOSTASIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_CHOLESTEROL_HOMEOSTASIS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_CHOLESTEROL_HOMEOSTASIS