DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group4.GMP.mono_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY
Enrichment Score (ES)-0.33216488
Normalized Enrichment Score (NES)-1.2503861
Nominal p-value0.25095785
FDR q-value0.4134616
FWER p-Value0.862
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Gpx316380.464-0.0277No
2Prnp20430.424-0.0067No
3Stk2522940.4060.0192No
4Txnrd231760.3520.0135No
5Gpx434310.3380.0331No
6Gsr44610.2780.0145No
7Nqo152540.2380.0023No
8Fes72550.168-0.0673No
9Scaf481220.134-0.0920No
10Srxn182040.131-0.0836No
11Pfkp85890.116-0.0895No
12G6pdx96450.080-0.1271No
13Oxsr1100010.066-0.1362No
14Ptpa104720.049-0.1517No
15Hmox2105510.046-0.1509No
16Msra13203-0.035-0.2601No
17Gclm13294-0.038-0.2605No
18Mgst113461-0.045-0.2635No
19Txnrd113715-0.053-0.2695No
20Mpo13722-0.053-0.2650No
21Sod214029-0.064-0.2723No
22Mbp14104-0.066-0.2694No
23Prdx614336-0.076-0.2724No
24Ndufs214674-0.087-0.2789No
25Abcc114869-0.094-0.2787No
26Egln215037-0.100-0.2768No
27Lsp115043-0.100-0.2680No
28Junb15208-0.107-0.2653No
29Sbno215606-0.120-0.2714No
30Glrx216171-0.143-0.2824No
31Hhex16184-0.143-0.2701No
32Pdlim117649-0.200-0.3142Yes
33Lamtor517910-0.211-0.3062Yes
34Atox118241-0.222-0.3002Yes
35Glrx18620-0.239-0.2947Yes
36Ercc218830-0.251-0.2810Yes
37Cat18922-0.256-0.2618Yes
38Gclc19653-0.291-0.2666Yes
39Ipcef119786-0.299-0.2453Yes
40Cdkn2d20640-0.345-0.2504Yes
41Txn120974-0.369-0.2314Yes
42Prdx121135-0.381-0.2039Yes
43Selenos21508-0.410-0.1828Yes
44Sod122450-0.498-0.1780Yes
45Ndufa622900-0.566-0.1461Yes
46Prdx423153-0.624-0.1006Yes
47Prdx223212-0.641-0.0454Yes
48Ftl123361-0.6980.0112Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY: Random ES distribution   
Gene set null distribution of ES for HALLMARK_REACTIVE_OXYGEN_SPECIES_PATHWAY