DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group4.GMP.mono_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)-0.5261472
Normalized Enrichment Score (NES)-1.693134
Nominal p-value0.06130268
FDR q-value0.122284
FWER p-Value0.143
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Atp6v0c4430.687-0.0063No
2Aldh6a112280.525-0.0301No
3Atp6v1c117390.454-0.0435No
4Dld20500.424-0.0489No
5Gpi126440.382-0.0672No
6Gpx434310.338-0.0945No
7Idh134720.335-0.0900No
8Ldhb34890.334-0.0846No
9Lrpprc34970.333-0.0788No
10Pdha136280.324-0.0783No
11Atp1b143190.285-0.1025No
12Oat50330.249-0.1284No
13Acadsb50370.249-0.1239No
14Mfn251720.242-0.1252No
15Alas152260.239-0.1230No
16Atp6v1h60010.212-0.1521No
17Pmpca61360.206-0.1541No
18Hadhb63790.199-0.1607No
19Dlst68380.184-0.1769No
20Mpc170910.175-0.1844No
21Cyb5a72010.170-0.1859No
22Sucla273910.163-0.1910No
23Opa175820.156-0.1962No
24Mtrr77030.152-0.1985No
25Ndufs177760.149-0.1989No
26Atp6v0e78080.148-0.1975No
27Hspa979020.145-0.1988No
28Bdh281650.133-0.2075No
29Slc25a1184820.121-0.2188No
30Pdhx86470.114-0.2237No
31Afg3l286630.113-0.2223No
32Nnt87460.110-0.2237No
33Ndufa993080.091-0.2460No
34Dlat93810.089-0.2474No
35Tcirg194790.085-0.2500No
36Vdac1102020.059-0.2797No
37Hccs105530.046-0.2938No
38Acadm105910.044-0.2946No
39Supv3l1108190.036-0.3036No
40Rhot2111500.025-0.3172No
41Glud1113220.020-0.3241No
42Etfdh113620.019-0.3255No
43Retsat117320.007-0.3411No
44Immt12382-0.007-0.3686No
45Tomm70a12423-0.008-0.3702No
46Maob12440-0.009-0.3707No
47Aco212480-0.010-0.3722No
48Ogdh12752-0.019-0.3834No
49Cox1512996-0.029-0.3932No
50Cox1013022-0.029-0.3938No
51Decr113381-0.042-0.4083No
52Ndufs413382-0.042-0.4075No
53Vdac313590-0.049-0.4154No
54Abcb713718-0.053-0.4199No
55Acadvl13970-0.062-0.4294No
56Bckdha14100-0.066-0.4337No
57Acaa1a14390-0.078-0.4446No
58Ndufa514422-0.079-0.4445No
59Atp6v1e114537-0.083-0.4478No
60Pdp114571-0.084-0.4477No
61Ndufs214674-0.087-0.4504No
62Ndufs615194-0.106-0.4706No
63Timm17a15444-0.115-0.4791No
64Nqo215461-0.116-0.4777No
65Mrps1515782-0.127-0.4890No
66Mrps3015911-0.133-0.4920No
67Polr2f15951-0.135-0.4912No
68Eci116140-0.141-0.4966No
69Slc25a1216168-0.143-0.4951No
70Mtrf116389-0.152-0.5017No
71Idh3a16521-0.157-0.5044No
72Oxa1l16578-0.159-0.5039No
73Sdha16626-0.161-0.5030No
74Hadha16746-0.165-0.5050No
75Ndufb316769-0.165-0.5029No
76Rhot116799-0.166-0.5011No
77Uqcrh17085-0.177-0.5100No
78Mtx217184-0.180-0.5108No
79Grpel117229-0.182-0.5094No
80Etfa17230-0.182-0.5060No
81Mrps1117312-0.186-0.5061No
82Bax17329-0.187-0.5033No
83Cox7a2l17371-0.188-0.5016No
84Ndufs317475-0.193-0.5025No
85Aifm117787-0.206-0.5119No
86Pdhb17862-0.209-0.5113No
87Echs118093-0.219-0.5171No
88Etfb18243-0.222-0.5193No
89Ndufb518404-0.230-0.5219Yes
90Cs18415-0.231-0.5181Yes
91Mgst318507-0.234-0.5177Yes
92Idh3g18621-0.239-0.5181Yes
93Sdhd18727-0.244-0.5181Yes
94Timm8b18821-0.250-0.5174Yes
95Mrpl3518903-0.255-0.5162Yes
96Atp6ap119127-0.267-0.5208Yes
97Uqcr1019166-0.269-0.5175Yes
98Mrps1219213-0.270-0.5145Yes
99Acaa219302-0.275-0.5132Yes
100Sdhc19397-0.280-0.5121Yes
101Vdac219581-0.286-0.5146Yes
102Got219634-0.290-0.5115Yes
103Fxn19731-0.296-0.5102Yes
104Ndufs719742-0.297-0.5051Yes
105Uqcrc119794-0.300-0.5018Yes
106Casp719871-0.304-0.4994Yes
107Mrpl1119924-0.307-0.4960Yes
108Ndufv219954-0.309-0.4916Yes
109Cox1719957-0.309-0.4860Yes
110Atp6v0b20182-0.318-0.4897Yes
111Iscu20256-0.323-0.4869Yes
112Timm5020348-0.328-0.4847Yes
113Idh220412-0.331-0.4813Yes
114Uqcr1120447-0.333-0.4767Yes
115Mdh120454-0.334-0.4708Yes
116Por20563-0.341-0.4691Yes
117Mdh220669-0.348-0.4672Yes
118Atp6v1g120683-0.348-0.4614Yes
119Mrpl1520716-0.351-0.4563Yes
120Phyh20789-0.356-0.4528Yes
121Ech120931-0.366-0.4521Yes
122Cpt1a20934-0.366-0.4455Yes
123Uqcrq20947-0.367-0.4392Yes
124Ndufs820963-0.368-0.4331Yes
125Uqcrc221181-0.384-0.4353Yes
126Ndufab121276-0.391-0.4321Yes
127Atp6v1f21317-0.393-0.4266Yes
128Suclg121323-0.394-0.4196Yes
129Sdhb21334-0.395-0.4128Yes
130Idh3b21342-0.396-0.4058Yes
131Ndufa321384-0.400-0.4002Yes
132Cox6c21490-0.409-0.3971Yes
133Htra221527-0.412-0.3911Yes
134Cox1121563-0.415-0.3850Yes
135Ndufb221784-0.429-0.3865Yes
136Uqcrb21810-0.432-0.3796Yes
137Cyc121904-0.442-0.3754Yes
138Ndufa421922-0.445-0.3680Yes
139Cox7b21927-0.445-0.3600Yes
140Timm1321929-0.445-0.3518Yes
141Mrps2221933-0.446-0.3438Yes
142Ndufc221958-0.448-0.3366Yes
143Timm921961-0.448-0.3284Yes
144Cox7c21971-0.449-0.3206Yes
145Ndufa722054-0.457-0.3157Yes
146Uqcrfs122065-0.458-0.3077Yes
147Atp6v1d22113-0.463-0.3011Yes
148Ndufc122160-0.469-0.2945Yes
149Fh122168-0.470-0.2862Yes
150Ndufa822276-0.482-0.2819Yes
151Acat122368-0.490-0.2767Yes
152Slc25a2022409-0.494-0.2694Yes
153Slc25a322487-0.503-0.2634Yes
154Cox6b122493-0.504-0.2544Yes
155Cox7a222496-0.504-0.2452Yes
156Ndufb622562-0.513-0.2385Yes
157Cox4i122575-0.515-0.2296Yes
158Slc25a422615-0.520-0.2217Yes
159Ldha22704-0.532-0.2156Yes
160Cyb5r322708-0.533-0.2060Yes
161Tomm2222722-0.535-0.1967Yes
162Slc25a522767-0.541-0.1886Yes
163Ndufv122826-0.551-0.1810Yes
164Ndufa622900-0.566-0.1737Yes
165Cox5b22946-0.575-0.1650Yes
166Ndufa122956-0.577-0.1548Yes
167Mrpl3423093-0.609-0.1494Yes
168Ndufa223230-0.647-0.1433Yes
169Timm1023241-0.652-0.1318Yes
170Ndufb723247-0.654-0.1200Yes
171Atp5pb23250-0.654-0.1080Yes
172Hsd17b1023280-0.666-0.0970Yes
173Fdx123352-0.694-0.0873Yes
174Prdx323354-0.695-0.0746Yes
175Cox5a23356-0.697-0.0618Yes
176Cox6a123417-0.727-0.0510Yes
177Cox8a23462-0.766-0.0388Yes
178Ndufb823510-0.800-0.0261Yes
179Surf123536-0.829-0.0119Yes
180Phb223549-0.8520.0032Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_OXIDATIVE_PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_OXIDATIVE_PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_OXIDATIVE_PHOSPHORYLATION