DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group4.GMP.mono_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class3
GeneSetHALLMARK_INFLAMMATORY_RESPONSE
Enrichment Score (ES)-0.3278704
Normalized Enrichment Score (NES)-1.4495631
Nominal p-value0.022088353
FDR q-value0.23665108
FWER p-Value0.496
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INFLAMMATORY_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Rnf144b6060.628-0.0119No
2Il186410.6190.0004No
3Osmr10250.548-0.0038No
4Itgb313110.514-0.0046No
5Slc4a415510.476-0.0042No
6Cd8216270.4660.0029No
7P2rx719420.433-0.0009No
8Ebi320420.4250.0043No
9Hpn21450.4160.0092No
10Nod223280.4030.0104No
11Pdpn23960.3990.0164No
12Il1b24890.3910.0211No
13Kcnj225820.3870.0258No
14Kif1b26210.3840.0327No
15Mefv27490.3780.0356No
16Lif28680.3700.0388No
17Slc1a229020.3700.0456No
18Il1029550.3680.0515No
19Cxcl1029620.3670.0594No
20Tnfrsf1b31740.3520.0582No
21Ccl2432830.3470.0613No
22Msr134450.3370.0619No
23Gnai336290.3240.0613No
24Stab142310.2910.0421No
25Klf644390.2790.0395No
26Nlrp347340.2640.0328No
27Sgms247530.2630.0379No
28Atp2b150410.2490.0312No
29Lcp251570.2430.0316No
30Plaur52060.2400.0349No
31Osm55600.2300.0250No
32Cybb58990.2170.0154No
33Rasgrp159170.2160.0194No
34Raf161020.2080.0162No
35Timp161910.2040.0170No
36Chst261990.2040.0212No
37Il2rb62080.2040.0254No
38Irak262870.2020.0266No
39Fzd571760.172-0.0075No
40Btg272710.168-0.0078No
41Olr173870.163-0.0091No
42Psen176570.154-0.0171No
43Ptgir76900.152-0.0151No
44Atp2a277510.150-0.0143No
45Gp1ba78860.145-0.0168No
46Tnfaip682100.131-0.0277No
47Atp2c188040.108-0.0506No
48Il7r88480.106-0.0500No
49Itga589380.104-0.0515No
50Met89990.102-0.0518No
51Best191390.097-0.0556No
52Nfkbia91430.096-0.0536No
53Ros193120.091-0.0588No
54Ifnar194310.087-0.0619No
55Adrm195190.084-0.0637No
56Abi197360.076-0.0712No
57Acvr1b97450.076-0.0699No
58Slc31a299450.069-0.0769No
59Pcdh7102630.057-0.0891No
60Csf3r102690.056-0.0881No
61Slc11a2103120.055-0.0887No
62Tapbp107740.037-0.1075No
63Mxd1112680.022-0.1280No
64Dcbld2115560.013-0.1400No
65Tacr3118610.002-0.1529No
66Slamf1118710.002-0.1532No
67Hif1a118940.001-0.1541No
68Itgb8119450.000-0.1562No
69Slc7a212278-0.003-0.1703No
70Il1512510-0.011-0.1799No
71Ifngr212632-0.015-0.1847No
72Slc31a112676-0.017-0.1862No
73Lpar112837-0.022-0.1925No
74Rgs112945-0.027-0.1965No
75Il18r113379-0.041-0.2140No
76Adgre113533-0.047-0.2195No
77Icosl13622-0.051-0.2221No
78Clec5a13623-0.051-0.2210No
79Ldlr13808-0.056-0.2276No
80Gna1513918-0.060-0.2309No
81Rhog14074-0.065-0.2361No
82Nampt14150-0.068-0.2378No
83P2rx414179-0.070-0.2374No
84Cxcr614257-0.072-0.2391No
85Acvr2a14263-0.073-0.2377No
86Cx3cl114291-0.074-0.2372No
87Lyn14365-0.077-0.2386No
88Irf714388-0.078-0.2378No
89Slc28a214670-0.087-0.2479No
90Il15ra14899-0.095-0.2555No
91Inhba14913-0.095-0.2539No
92Pvr14934-0.096-0.2527No
93Nfkb115003-0.099-0.2534No
94Pik3r515027-0.100-0.2521No
95Sema4d15326-0.111-0.2624No
96Lamp315351-0.112-0.2609No
97Nmur115400-0.114-0.2605No
98Tlr215447-0.115-0.2599No
99Sele15496-0.116-0.2593No
100Cd6915542-0.118-0.2586No
101Lck15689-0.124-0.2621No
102Eif2ak215923-0.134-0.2691No
103Kcnmb216113-0.140-0.2740No
104Ptpre16216-0.145-0.2752No
105Ccr716306-0.149-0.2757No
106Scarf116707-0.163-0.2891No
107Sell16738-0.164-0.2867No
108Rtp416801-0.166-0.2857No
109Cd4016836-0.168-0.2834No
110Npffr217142-0.179-0.2924No
111Mmp1417211-0.181-0.2913No
112Hrh117249-0.183-0.2888No
113F317706-0.202-0.3038No
114Sri17764-0.205-0.3017No
115Irf118000-0.215-0.3069No
116Hbegf18004-0.215-0.3023No
117Cd1418394-0.230-0.3138No
118Tlr118660-0.241-0.3197No
119Adora2b18709-0.244-0.3164No
120Il10ra18772-0.248-0.3135No
121Ptafr18793-0.249-0.3088No
122Il4ra18815-0.250-0.3042No
123Rela18944-0.257-0.3039No
124Gch119027-0.262-0.3016No
125Csf119257-0.272-0.3054No
126Slc7a119390-0.279-0.3048No
127Tnfsf1019472-0.284-0.3020No
128Aplnr19907-0.306-0.3137No
129Gabbr120241-0.322-0.3207Yes
130P2ry220357-0.328-0.3184Yes
131Pde4b20381-0.330-0.3120Yes
132Nmi20565-0.341-0.3123Yes
133Cd4820665-0.347-0.3088Yes
134Tnfsf920731-0.352-0.3038Yes
135Cdkn1a20892-0.363-0.3026Yes
136Il1r121097-0.377-0.3029Yes
137Selenos21508-0.410-0.3113Yes
138Ptger221528-0.412-0.3030Yes
139Tnfrsf921662-0.421-0.2993Yes
140Abca121785-0.429-0.2950Yes
141Ccrl221807-0.432-0.2863Yes
142Ffar221903-0.441-0.2806Yes
143Ahr22011-0.454-0.2751Yes
144Rgs1622145-0.467-0.2704Yes
145Kcna322175-0.470-0.2612Yes
146Calcrl22177-0.471-0.2508Yes
147Cmklr122256-0.480-0.2435Yes
148Ifitm122344-0.488-0.2364Yes
149Gpr18322464-0.500-0.2304Yes
150Il18rap22691-0.530-0.2283Yes
151Scn1b22738-0.537-0.2183Yes
152Gpc322765-0.540-0.2075Yes
153Aqp922807-0.548-0.1970Yes
154Tnfsf1522848-0.554-0.1865Yes
155Axl22987-0.585-0.1794Yes
156Ripk222993-0.586-0.1666Yes
157Emp323019-0.592-0.1545Yes
158Gpr13223109-0.616-0.1447Yes
159Tacr123162-0.628-0.1330Yes
160Ptger423249-0.654-0.1221Yes
161Myc23257-0.657-0.1079Yes
162Icam123259-0.657-0.0934Yes
163Ccl523266-0.660-0.0790Yes
164Ly6e23439-0.750-0.0697Yes
165Icam423452-0.759-0.0534Yes
166Tlr323528-0.819-0.0384Yes
167Sphk123552-0.854-0.0204Yes
168Bst223617-1.0590.0003Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INFLAMMATORY_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INFLAMMATORY_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INFLAMMATORY_RESPONSE