DatasetGMP.GMP.mono_Pheno.cls
#Group1_versus_Group4.GMP.mono_Pheno.cls
#Group1_versus_Group4_repos
PhenotypeGMP.mono_Pheno.cls#Group1_versus_Group4_repos
Upregulated in class0
GeneSetHALLMARK_E2F_TARGETS
Enrichment Score (ES)0.16400571
Normalized Enrichment Score (NES)0.65703857
Nominal p-value0.76954734
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Cdkn2c3870.713-0.0006Yes
2Cdc25b6620.6150.0015Yes
3Espl18810.5680.0048Yes
4Dlgap59890.5500.0126Yes
5Racgap110390.5470.0227Yes
6Hnrnpd12980.5170.0232Yes
7Kif18b13030.5160.0346Yes
8Ncapd213250.5090.0451Yes
9Kif2c13270.5090.0564Yes
10Ipo715380.4780.0581Yes
11Xpo116370.4640.0643Yes
12Rad2118000.4460.0674Yes
13Kif2226220.3840.0409Yes
14Cit27620.3770.0434Yes
15Cenpe27820.3750.0509Yes
16Top2a28560.3700.0561Yes
17Spag529800.3650.0590Yes
18Hmmr32790.3470.0541Yes
19Cdkn1b33960.3400.0567Yes
20Depdc1a34170.3390.0634Yes
21Srsf134350.3380.0703Yes
22Nup10734380.3370.0777Yes
23Bub1b35090.3330.0822Yes
24Cse1l35860.3280.0862Yes
25Cdk136650.3210.0901Yes
26Ccp11038050.3150.0912Yes
27Ccnb238550.3110.0961Yes
28Cdca839080.3080.1007Yes
29Kif440210.3020.1027Yes
30Smc1a40720.2990.1073Yes
31Lmnb140730.2990.1139Yes
32Cdkn2a40890.2980.1199Yes
33Spc2541460.2950.1241Yes
34Aurka42800.2880.1249Yes
35Mcm543550.2840.1281Yes
36Mki6744070.2810.1322Yes
37Plk144160.2800.1381Yes
38Smc344440.2790.1432Yes
39Zw1046290.2690.1413Yes
40Dnmt146310.2690.1473Yes
41Lbr46360.2680.1531Yes
42Pan246520.2670.1585Yes
43Melk47210.2640.1615Yes
44Atad249570.2520.1571Yes
45Brca149760.2520.1619Yes
46Wdr9050580.2480.1640Yes
47Tacc353170.2350.1582No
48Bard155910.2280.1517No
49Syncrip56560.2250.1540No
50Nup20557060.2220.1568No
51Ube2s57310.2210.1608No
52Wee159240.2160.1574No
53Aurkb60810.2100.1554No
54Brms1l61330.2060.1579No
55Ubr761420.2060.1621No
56Ilf363090.2020.1595No
57Pole63300.2010.1632No
58Diaph366560.1920.1536No
59Tmpo67890.1870.1521No
60Prkdc68730.1820.1527No
61Timeless71250.1730.1458No
62Dck71800.1710.1474No
63Pds5b72210.1700.1494No
64Rbbp774950.1590.1413No
65Mybl276720.1530.1373No
66Mcm477930.1480.1355No
67Ddx39a77960.1480.1387No
68Msh279240.1430.1365No
69Tra2b79980.1400.1365No
70Cdca380290.1390.1383No
71Hmga1b80410.1380.1409No
72Mre11a81570.1330.1390No
73Prps181680.1330.1415No
74Plk481840.1320.1438No
75Slbp83710.1250.1387No
76Ing384050.1240.1400No
77Cbx584110.1230.1426No
78Rfc184410.1220.1441No
79Chek284890.1200.1448No
80Prim284940.1200.1473No
81Cks286150.1150.1447No
82E2f886260.1150.1469No
83Anp32e86570.1130.1481No
84Suv39h188890.1060.1406No
85Stag191960.0950.1297No
86Mlh194240.0870.1219No
87Tubb595830.0810.1170No
88Eed96780.0780.1147No
89Ctcf97580.0750.1131No
90Brca2102650.0570.0927No
91Ssrp1103150.0550.0919No
92Lsm8107890.0370.0725No
93Chek1107970.0370.0730No
94Shmt1109690.0300.0664No
95Xrcc6110720.0270.0626No
96Ak2111320.0250.0607No
97Hells113550.0190.0516No
98Tbrg4114050.0170.0499No
99Mcm6114130.0170.0500No
100Mcm3114880.0150.0472No
101Tcf19115590.0130.0445No
102Smc4115850.0120.0437No
103Nap1l1116140.0110.0427No
104Srsf2117560.0060.0368No
105Nudt21117600.0060.0368No
106Gspt1118090.0040.0349No
107Pttg112403-0.0070.0097No
108Pnn12444-0.0090.0082No
109Smc612484-0.0110.0068No
110Tk112530-0.0120.0051No
111Cdkn312657-0.0160.0001No
112Nop5612683-0.017-0.0006No
113Ube2t12736-0.019-0.0024No
114Mcm712745-0.019-0.0023No
115Mms22l12764-0.020-0.0026No
116Pola212779-0.020-0.0028No
117Exosc812983-0.028-0.0108No
118Mad2l113344-0.040-0.0253No
119Mthfd213820-0.057-0.0443No
120H2az113912-0.060-0.0468No
121Pold114299-0.074-0.0616No
122Nasp14477-0.081-0.0674No
123Mcm214588-0.085-0.0702No
124Ezh214621-0.085-0.0697No
125Eif2s114841-0.093-0.0769No
126Pole414878-0.094-0.0764No
127Pold314987-0.098-0.0788No
128Hmgb214992-0.099-0.0768No
129Lig115033-0.100-0.0762No
130Luc7l315100-0.102-0.0768No
131Dscc115178-0.106-0.0777No
132Psmc3ip15241-0.108-0.0779No
133Rrm215507-0.117-0.0866No
134Donson15581-0.119-0.0871No
135Rpa315628-0.122-0.0863No
136Ppp1r815687-0.124-0.0861No
137Cdc25a15776-0.127-0.0870No
138Rpa115896-0.133-0.0891No
139Rad51c16026-0.138-0.0915No
140Ccne116154-0.142-0.0938No
141Rad51ap116181-0.143-0.0917No
142Gins416280-0.148-0.0926No
143Pms216416-0.153-0.0949No
144Dek16442-0.154-0.0925No
145Rad5016477-0.156-0.0905No
146Nup15316562-0.158-0.0905No
147Usp116569-0.159-0.0872No
148Nbn16919-0.171-0.0983No
149Psip116943-0.172-0.0954No
150Ppm1d16992-0.174-0.0936No
151Hmgb317148-0.179-0.0962No
152Trp5317404-0.190-0.1029No
153Orc217528-0.195-0.1038No
154Jpt117676-0.201-0.1055No
155Hus117826-0.208-0.1073No
156Birc518263-0.223-0.1209No
157Trip1318287-0.224-0.1168No
158Paics18352-0.227-0.1145No
159Rad118583-0.238-0.1190No
160H2ax18654-0.241-0.1166No
161Spc2418722-0.244-0.1140No
162Dclre1b18972-0.259-0.1189No
163Gins318980-0.259-0.1134No
164Cnot919071-0.264-0.1113No
165Tipin19095-0.265-0.1064No
166Rnaseh2a19129-0.267-0.1018No
167Nolc119157-0.268-0.0970No
168Cdc2019194-0.270-0.0925No
169Stmn119611-0.288-0.1038No
170Ung19675-0.292-0.0999No
171Dut19738-0.296-0.0960No
172Phf5a19763-0.298-0.0903No
173Rfc219766-0.298-0.0837No
174Cenpm19897-0.306-0.0825No
175Asf1b19903-0.306-0.0758No
176Gins119923-0.307-0.0698No
177Orc619997-0.310-0.0660No
178Rpa220001-0.311-0.0591No
179Pcna20360-0.328-0.0671No
180Rfc320686-0.348-0.0732No
181Lyar20837-0.359-0.0716No
182Cdkn1a20892-0.363-0.0658No
183Ranbp120994-0.370-0.0618No
184Tfrc21073-0.375-0.0568No
185Mxd321266-0.390-0.0562No
186Pop721715-0.425-0.0659No
187Cdk421809-0.432-0.0602No
188Tubg122032-0.455-0.0595No
189Cks1b22234-0.476-0.0574No
190Pold222246-0.478-0.0472No
191Asf1a22307-0.485-0.0389No
192Snrpb22317-0.486-0.0285No
193Ran22328-0.487-0.0180No
194Pa2g422350-0.488-0.0080No
195Prdx423153-0.624-0.0283No
196Myc23257-0.657-0.0180No
197Dctpp123305-0.673-0.0050No
198Nme123537-0.8310.0037No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS