Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	GMP.GMP.mono_Pheno.cls #Group1_versus_Group3.GMP.mono_Pheno.cls #Group1_versus_Group3_repos
Phenotype	GMP.mono_Pheno.cls#Group1_versus_Group3_repos
Upregulated in class	0
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	0.22407462
Normalized Enrichment Score (NES)	0.9447863
Nominal p-value	0.5477583
FDR q-value	1.0
FWER p-Value	0.997

Table: GSEA details [plain text format]
	SYMBOL	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	Gfpt2	3	1.242	0.0278	Yes
2	Vegfa	24	1.024	0.0500	Yes
3	Bhlhe40	186	0.729	0.0596	Yes
4	Serpinb2	200	0.721	0.0753	Yes
5	Fos	365	0.629	0.0824	Yes
6	Dusp1	450	0.593	0.0922	Yes
7	Plpp3	787	0.517	0.0895	Yes
8	Plau	851	0.503	0.0981	Yes
9	Ptgs2	947	0.486	0.1050	Yes
10	Tnfaip6	1021	0.473	0.1125	Yes
11	Cd83	1084	0.462	0.1203	Yes
12	Btg1	1119	0.457	0.1291	Yes
13	Mcl1	1256	0.436	0.1331	Yes
14	Ier2	1307	0.428	0.1407	Yes
15	Jun	1354	0.424	0.1482	Yes
16	Jag1	1572	0.400	0.1480	Yes
17	Fut4	1610	0.397	0.1553	Yes
18	Il1b	1670	0.391	0.1616	Yes
19	Gem	1964	0.370	0.1575	Yes
20	Il18	2002	0.369	0.1642	Yes
21	Sgk1	2040	0.365	0.1708	Yes
22	Ifit2	2297	0.345	0.1677	Yes
23	Il23a	2309	0.344	0.1750	Yes
24	Sat1	2363	0.340	0.1804	Yes
25	Rhob	2439	0.332	0.1846	Yes
26	Atf3	2446	0.331	0.1918	Yes
27	Egr1	2517	0.324	0.1961	Yes
28	Abca1	2552	0.321	0.2019	Yes
29	Plk2	2566	0.321	0.2086	Yes
30	Fosl2	2603	0.319	0.2142	Yes
31	Pdlim5	2682	0.312	0.2179	Yes
32	Trip10	2703	0.311	0.2241	Yes
33	Fosb	3010	0.293	0.2176	No
34	Phlda1	3104	0.286	0.2201	No
35	Ifih1	3262	0.277	0.2196	No
36	Atp2b1	3772	0.249	0.2035	No
37	Birc2	3775	0.249	0.2090	No
38	Nfkb2	3816	0.247	0.2129	No
39	Sphk1	4118	0.232	0.2053	No
40	G0s2	4485	0.218	0.1946	No
41	Dennd5a	4839	0.205	0.1841	No
42	Hbegf	5076	0.195	0.1784	No
43	Btg2	5190	0.193	0.1780	No
44	Nampt	5212	0.192	0.1814	No
45	Tnfaip2	5496	0.180	0.1734	No
46	Tgif1	5571	0.178	0.1742	No
47	Map3k8	5623	0.176	0.1760	No
48	Ccnl1	5648	0.175	0.1789	No
49	Tnc	5732	0.172	0.1792	No
50	Cxcl10	5762	0.171	0.1819	No
51	Lamb3	5777	0.170	0.1851	No
52	Fjx1	5806	0.169	0.1877	No
53	Tnfaip8	5861	0.167	0.1892	No
54	Tlr2	6048	0.160	0.1848	No
55	Cebpd	6270	0.152	0.1788	No
56	B4galt5	6404	0.147	0.1765	No
57	Cd44	6757	0.135	0.1645	No
58	Tsc22d1	7023	0.126	0.1560	No
59	Klf4	7133	0.123	0.1541	No
60	Klf6	7200	0.121	0.1541	No
61	Dnajb4	7261	0.119	0.1542	No
62	Plaur	7848	0.103	0.1315	No
63	Zbtb10	7861	0.103	0.1333	No
64	Zfp36	7896	0.101	0.1341	No
65	Irs2	7917	0.101	0.1355	No
66	Kynu	7958	0.099	0.1361	No
67	Klf2	8333	0.089	0.1221	No
68	Dusp4	8400	0.087	0.1212	No
69	Tnip1	8403	0.087	0.1231	No
70	Tank	8618	0.080	0.1158	No
71	B4galt1	8650	0.079	0.1162	No
72	Pfkfb3	8720	0.077	0.1150	No
73	Tnip2	8956	0.069	0.1066	No
74	Ppp1r15a	9010	0.067	0.1058	No
75	Rel	9042	0.067	0.1060	No
76	Tnfaip3	9541	0.052	0.0859	No
77	Traf1	9575	0.051	0.0857	No
78	Cflar	10011	0.038	0.0680	No
79	Birc3	10087	0.036	0.0656	No
80	Rnf19b	10128	0.034	0.0646	No
81	Il7r	10573	0.021	0.0462	No
82	Il15ra	11262	0.001	0.0168	No
83	Ifngr2	11542	-0.003	0.0050	No
84	Nfe2l2	11618	-0.006	0.0020	No
85	Klf10	11785	-0.011	-0.0049	No
86	Dram1	11898	-0.014	-0.0093	No
87	Rcan1	11910	-0.015	-0.0095	No
88	Olr1	11933	-0.016	-0.0101	No
89	Irf1	12166	-0.022	-0.0195	No
90	Klf9	12197	-0.023	-0.0202	No
91	Dusp2	12308	-0.026	-0.0243	No
92	Id2	12340	-0.027	-0.0250	No
93	Ninj1	12350	-0.027	-0.0248	No
94	Panx1	12378	-0.028	-0.0253	No
95	Mxd1	12833	-0.041	-0.0438	No
96	Tiparp	13263	-0.055	-0.0609	No
97	Pnrc1	13474	-0.061	-0.0684	No
98	Fosl1	13476	-0.062	-0.0671	No
99	Smad3	13510	-0.063	-0.0671	No
100	Per1	13548	-0.064	-0.0672	No
101	Icosl	13682	-0.068	-0.0714	No
102	Slc16a6	13743	-0.070	-0.0724	No
103	Nr4a2	13808	-0.072	-0.0735	No
104	Efna1	14232	-0.085	-0.0896	No
105	Nr4a1	14534	-0.094	-0.1003	No
106	Marcks	14619	-0.097	-0.1017	No
107	Trib1	14684	-0.099	-0.1022	No
108	Ccl5	14816	-0.104	-0.1055	No
109	Il6st	14853	-0.105	-0.1046	No
110	Yrdc	14928	-0.108	-0.1053	No
111	Litaf	14959	-0.109	-0.1042	No
112	Hes1	14991	-0.110	-0.1030	No
113	Zc3h12a	15193	-0.116	-0.1090	No
114	Slc2a3	15376	-0.123	-0.1140	No
115	Nfkb1	15415	-0.124	-0.1128	No
116	Cd69	15440	-0.125	-0.1110	No
117	Bcl3	15570	-0.129	-0.1136	No
118	Inhba	15617	-0.131	-0.1126	No
119	Sod2	15983	-0.145	-0.1249	No
120	Icam1	15994	-0.145	-0.1221	No
121	Cd80	16188	-0.152	-0.1269	No
122	Plek	16347	-0.156	-0.1301	No
123	Ets2	16378	-0.158	-0.1278	No
124	Slc2a6	16447	-0.160	-0.1271	No
125	Stat5a	16473	-0.161	-0.1246	No
126	Kdm6b	16558	-0.164	-0.1244	No
127	Ripk2	16942	-0.176	-0.1368	No
128	Tap1	17013	-0.179	-0.1358	No
129	Ptpre	17214	-0.186	-0.1401	No
130	Ldlr	17252	-0.187	-0.1375	No
131	Socs3	17675	-0.205	-0.1509	No
132	Rela	17758	-0.209	-0.1497	No
133	Serpinb8	17843	-0.211	-0.1485	No
134	F2rl1	18037	-0.220	-0.1518	No
135	Map2k3	18065	-0.221	-0.1480	No
136	Sdc4	18403	-0.238	-0.1570	No
137	Junb	18575	-0.245	-0.1587	No
138	Csf1	18962	-0.261	-0.1693	No
139	Nfkbia	18965	-0.261	-0.1635	No
140	Nfil3	19043	-0.264	-0.1609	No
141	Bcl2a1d	19074	-0.266	-0.1562	No
142	Snn	19138	-0.269	-0.1528	No
143	Ehd1	19278	-0.273	-0.1526	No
144	Nfat5	19349	-0.276	-0.1494	No
145	Bcl6	19585	-0.288	-0.1529	No
146	F3	19670	-0.292	-0.1499	No
147	Tnf	19932	-0.304	-0.1542	No
148	Gch1	20137	-0.315	-0.1558	No
149	Nfkbie	20212	-0.320	-0.1518	No
150	Cebpb	20281	-0.323	-0.1474	No
151	Btg3	20341	-0.326	-0.1426	No
152	Clcf1	20369	-0.328	-0.1364	No
153	Ier5	20378	-0.328	-0.1293	No
154	Eif1	20522	-0.337	-0.1278	No
155	Tnfsf9	20556	-0.339	-0.1216	No
156	Gadd45b	20964	-0.365	-0.1307	No
157	Cdkn1a	21058	-0.372	-0.1263	No
158	Egr2	21312	-0.388	-0.1284	No
159	Relb	21425	-0.396	-0.1243	No
160	Tnfrsf9	21434	-0.396	-0.1157	No
161	Rigi	21665	-0.417	-0.1161	No
162	Nr4a3	21673	-0.418	-0.1070	No
163	Gadd45a	21810	-0.431	-0.1031	No
164	Pde4b	21881	-0.437	-0.0962	No
165	Pmepa1	21884	-0.437	-0.0865	No
166	Maff	21998	-0.447	-0.0812	No
167	Lif	22045	-0.451	-0.0731	No
168	Tubb2a	22175	-0.462	-0.0682	No
169	Ptger4	22695	-0.530	-0.0784	No
170	Gpr183	22876	-0.560	-0.0734	No
171	Spsb1	22905	-0.565	-0.0619	No
172	Myc	22987	-0.581	-0.0523	No
173	Sqstm1	23020	-0.586	-0.0405	No
174	Ier3	23057	-0.595	-0.0286	No
175	Ccrl2	23440	-0.760	-0.0278	No
176	Ccnd1	23442	-0.761	-0.0107	No
177	Dusp5	23513	-0.818	0.0047	No